TRINITY_DN14745_c15_g1_i2 |
Mononuleotide |
(T)14 |
14 |
1795 |
1808 |
2 |
4529498 |
4528190 |
Primers |
TRINITY_DN12556_c3_g3_i8 |
Mononucleotide |
(A)10 |
10 |
7949 |
7958 |
7 |
16141065 |
16133126 |
Primers |
TRINITY_DN11471_c0_g5_i2 |
Trinucleotide |
(AGA)5 |
15 |
15878 |
15892 |
5 |
26768909 |
26762805 |
Primers |
TRINITY_DN14459_c1_g1_i14 |
Mononucleotide |
(T)10 |
10 |
125 |
134 |
6 |
25763103 |
25761354 |
Primers |
TRINITY_DN14459_c1_g1_i14 |
Dinucleotide |
(AG)8 |
16 |
12129 |
12144 |
6 |
25763103 |
25761354 |
Primers |
TRINITY_DN14459_c1_g1_i14 |
Dinucleotide |
(AT)6 |
12 |
12723 |
12734 |
6 |
25763103 |
25761354 |
Primers |
TRINITY_DN14459_c1_g1_i14 |
Trinucleotide |
(CTT)5 |
15 |
14496 |
14510 |
6 |
25763103 |
25761354 |
Primers |
TRINITY_DN13469_c0_g1_i3 |
Mononucleotide |
(A)39 |
39 |
1 |
39 |
3 |
3410782 |
3418796 |
Primers |
TRINITY_DN13469_c0_g1_i3 |
Trinucleotide |
(AGA)6 |
18 |
14091 |
14108 |
3 |
3410782 |
3418796 |
Primers |
TRINITY_DN14036_c0_g2_i15 |
Trinucleotide |
(GAA)6 |
18 |
13358 |
13375 |
2 |
11603407 |
11598405 |
Primers |
TRINITY_DN14734_c4_g2_i2 |
Mononucleotide |
(T)16 |
16 |
1370 |
1385 |
4 |
15525972 |
15525424 |
Primers |
TRINITY_DN14734_c4_g2_i2 |
Mononucleotide |
(A)13 |
13 |
5556 |
5568 |
4 |
15525972 |
15525424 |
Primers |
TRINITY_DN14734_c4_g2_i2 |
Mononucleotide |
(A)10 |
10 |
8665 |
8674 |
4 |
15525972 |
15525424 |
Primers |
TRINITY_DN13334_c0_g2_i17 |
Mononucleotide |
(A)10 |
10 |
11925 |
11934 |
1 |
26965735 |
26960167 |
Primers |
TRINITY_DN14566_c1_g1_i14 |
Mononucleotide |
(A)22 |
22 |
8878 |
8899 |
3 |
38178071 |
38176009 |
Primers |
TRINITY_DN12362_c0_g1_i7 |
Mononucleotide |
(A)10 |
10 |
16 |
25 |
2 |
18188859 |
18180801 |
Primers |
TRINITY_DN12362_c0_g1_i7 |
Dinucleotide |
(CT)8 |
16 |
505 |
520 |
2 |
18188859 |
18180801 |
Primers |
TRINITY_DN12362_c0_g1_i7 |
Dinucleotide |
(GA)6 |
12 |
12167 |
12178 |
2 |
18188859 |
18180801 |
Primers |
TRINITY_DN14123_c0_g3_i19 |
Mononucleotide |
(A)28 |
28 |
1 |
28 |
5 |
27378178 |
27375528 |
Primers |
TRINITY_DN14123_c0_g3_i19 |
Dinucleotide |
(CT)7 |
14 |
7476 |
7489 |
5 |
27378178 |
27375528 |
Primers |
TRINITY_DN14123_c0_g3_i19 |
Trinucleotide |
(GAA)5 |
15 |
11660 |
11674 |
5 |
27378178 |
27375528 |
Primers |
TRINITY_DN14191_c1_g1_i17 |
Dinucleotide |
(AG)7 |
14 |
202 |
215 |
1 |
23004020 |
23006249 |
Primers |
TRINITY_DN14191_c1_g1_i17 |
Compound |
(TC)15ccctcacccctttacttcacatgccgagctaacccaattcctctttttc(T)12 |
91 |
422 |
512 |
1 |
23004020 |
23006249 |
Primers |
TRINITY_DN14158_c0_g1_i7 |
Mononucleotide |
(A)12 |
12 |
7728 |
7739 |
6 |
16301546 |
16304112 |
Primers |
TRINITY_DN11958_c6_g1_i3 |
Dinucleotide |
(TA)6 |
12 |
673 |
684 |
3 |
38775185 |
38763843 |
Primers |
TRINITY_DN11958_c6_g1_i3 |
Mononucleotide |
(T)12 |
12 |
7685 |
7696 |
3 |
38775185 |
38763843 |
Primers |
TRINITY_DN13030_c5_g2_i16 |
Mononucleotide |
(T)14 |
14 |
368 |
381 |
2 |
2213215 |
2218880 |
Primers |
TRINITY_DN13030_c5_g2_i16 |
Dinucleotide |
(TC)8 |
16 |
3905 |
3920 |
2 |
2213215 |
2218880 |
Primers |
TRINITY_DN13030_c5_g2_i16 |
Trinucleotide |
(CTC)5 |
15 |
7553 |
7567 |
2 |
2213215 |
2218880 |
Primers |
TRINITY_DN13030_c5_g2_i16 |
Mononucleotide |
(A)24 |
24 |
9916 |
9939 |
2 |
2213215 |
2218880 |
Primers |
TRINITY_DN11356_c0_g1_i12 |
Mononucleotide |
(A)10 |
10 |
2372 |
2381 |
3 |
8469629 |
8466841 |
Primers |
TRINITY_DN11356_c0_g1_i12 |
Mononucleotide |
(T)12 |
12 |
11350 |
11361 |
3 |
8469629 |
8466841 |
Primers |
TRINITY_DN14446_c2_g2_i13 |
Mononucleotide |
(T)13 |
13 |
11166 |
11178 |
6 |
23108467 |
23104710 |
Primers |
TRINITY_DN14345_c0_g2_i6 |
Dinucleotide |
(AT)6 |
12 |
2778 |
2789 |
5 |
19478139 |
19480497 |
Primers |
TRINITY_DN13648_c0_g1_i8 |
Mononucleotide |
(A)10 |
10 |
8881 |
8890 |
3 |
2906235 |
2903199 |
Primers |
TRINITY_DN14735_c11_g1_i10 |
Mononucleotide |
(T)11 |
11 |
1036 |
1046 |
7 |
10522203 |
10523171 |
Primers |
TRINITY_DN14735_c11_g1_i10 |
Mononucleotide |
(A)10 |
10 |
6337 |
6346 |
7 |
10522203 |
10523171 |
Primers |
TRINITY_DN14735_c11_g1_i10 |
Mononucleotide |
(T)16 |
16 |
7167 |
7182 |
7 |
10522203 |
10523171 |
Primers |
TRINITY_DN14735_c11_g1_i10 |
Mononucleotide |
(T)10 |
10 |
8847 |
8856 |
7 |
10522203 |
10523171 |
Primers |
TRINITY_DN13271_c0_g2_i16 |
Dinucleotide |
(GA)11 |
22 |
11022 |
11043 |
5 |
24336623 |
24340115 |
Primers |
TRINITY_DN14253_c2_g1_i6 |
Dinucleotide |
(AG)6 |
12 |
10317 |
10328 |
6 |
28847363 |
28850125 |
Primers |
TRINITY_DN12473_c0_g1_i19 |
Mononucleotide |
(A)17 |
17 |
5888 |
5904 |
6 |
10062349 |
10060102 |
Primers |
TRINITY_DN14403_c0_g1_i18 |
Dinucleotide |
(CT)6 |
12 |
1296 |
1307 |
3 |
33696873 |
33699561 |
Primers |
TRINITY_DN14403_c0_g1_i18 |
Mononucleotide |
(A)14 |
14 |
3959 |
3972 |
3 |
33696873 |
33699561 |
Primers |
TRINITY_DN14403_c0_g1_i18 |
Mononucleotide |
(T)11 |
11 |
10380 |
10390 |
3 |
33696873 |
33699561 |
Primers |
TRINITY_DN12053_c0_g1_i6 |
Mononucleotide |
(T)15 |
15 |
264 |
278 |
3 |
11552255 |
11545943 |
Primers |
TRINITY_DN12053_c0_g1_i6 |
Dinucleotide |
(CA)6 |
12 |
5277 |
5288 |
3 |
11552255 |
11545943 |
Primers |
TRINITY_DN12053_c0_g1_i6 |
Mononucleotide |
(A)12 |
12 |
9104 |
9115 |
3 |
11552255 |
11545943 |
Primers |
TRINITY_DN12053_c0_g1_i6 |
Mononucleotide |
(T)11 |
11 |
9959 |
9969 |
3 |
11552255 |
11545943 |
Primers |
TRINITY_DN12053_c0_g1_i6 |
Mononucleotide |
(A)10 |
10 |
10630 |
10639 |
3 |
11552255 |
11545943 |
Primers |
TRINITY_DN12436_c1_g2_i1 |
Dinucleotide |
(TA)6 |
12 |
47 |
58 |
6 |
12000055 |
11997175 |
Primers |
TRINITY_DN12436_c1_g2_i1 |
Trinucleotide |
(AAG)6 |
18 |
342 |
359 |
6 |
12000055 |
11997175 |
Primers |
TRINITY_DN12436_c1_g2_i1 |
Mononucleotide |
(T)11 |
11 |
4718 |
4728 |
6 |
12000055 |
11997175 |
Primers |
TRINITY_DN12436_c1_g2_i1 |
Mononucleotide |
(T)10 |
10 |
6107 |
6116 |
6 |
12000055 |
11997175 |
Primers |
TRINITY_DN12436_c1_g2_i1 |
Dinucleotide |
(GA)7 |
14 |
6902 |
6915 |
6 |
12000055 |
11997175 |
Primers |
TRINITY_DN13334_c0_g3_i6 |
Mononucleotide |
(A)12 |
12 |
10440 |
10451 |
7 |
8319960 |
8310982 |
Primers |
TRINITY_DN13334_c0_g3_i6 |
Mononucleotide |
(T)23 |
23 |
10603 |
10625 |
7 |
8319960 |
8310982 |
Primers |
TRINITY_DN13956_c2_g1_i20 |
Dinucleotide |
(TC)12 |
24 |
42 |
65 |
6 |
27367011 |
27370128 |
Primers |
TRINITY_DN13956_c2_g1_i20 |
Trinucleotide |
(GGC)7 |
21 |
428 |
448 |
6 |
27367011 |
27370128 |
Primers |
TRINITY_DN13956_c2_g1_i20 |
Mononucleotide |
(A)16 |
16 |
1128 |
1143 |
6 |
27367011 |
27370128 |
Primers |
TRINITY_DN13956_c2_g1_i20 |
Trinucleotide |
(AAT)8 |
24 |
9535 |
9558 |
6 |
27367011 |
27370128 |
Primers |
TRINITY_DN13956_c2_g1_i20 |
Mononucleotide |
(A)15 |
15 |
10220 |
10234 |
6 |
27367011 |
27370128 |
Primers |
TRINITY_DN12461_c4_g1_i18 |
Dinucleotide |
(AG)11 |
22 |
1885 |
1906 |
1 |
1067416 |
1072553 |
Primers |
TRINITY_DN12461_c4_g1_i18 |
Mononucleotide |
(A)11 |
11 |
8364 |
8374 |
1 |
1067416 |
1072553 |
Primers |
TRINITY_DN12461_c4_g1_i18 |
Compound |
(AG)8aagtgcgagaatctagagtgagaaaatcgaacgcgcacacagaagagaagaaggaaggtttttttttctttttttcctc(T)17 |
112 |
8844 |
8955 |
1 |
1067416 |
1072553 |
Primers |
TRINITY_DN14194_c2_g1_i22 |
Dinucleotide |
(TC)6 |
12 |
122 |
133 |
5 |
14499057 |
14501213 |
Primers |
TRINITY_DN14194_c2_g1_i22 |
Mononucleotide |
(A)14 |
14 |
1235 |
1248 |
5 |
14499057 |
14501213 |
Primers |
TRINITY_DN13550_c3_g1_i27 |
Mononucleotide |
(A)10 |
10 |
1803 |
1812 |
6 |
18003220 |
18000320 |
Primers |
TRINITY_DN13550_c3_g1_i27 |
Dinucleotide |
(AT)9 |
18 |
7430 |
7447 |
6 |
18003220 |
18000320 |
Primers |
TRINITY_DN13550_c3_g1_i27 |
Mononucleotide |
(A)17 |
17 |
10111 |
10127 |
6 |
18003220 |
18000320 |
Primers |
TRINITY_DN12664_c2_g1_i4 |
Compound |
(TC)9tgagctcggggaggctcatatagtcgta(TC)9 |
64 |
66 |
129 |
1 |
3753894 |
3748036 |
Primers |
TRINITY_DN12664_c2_g1_i4 |
Mononucleotide |
(T)10 |
10 |
627 |
636 |
1 |
3753894 |
3748036 |
Primers |
TRINITY_DN12664_c2_g1_i4 |
Mononucleotide |
(A)10 |
10 |
6288 |
6297 |
1 |
3753894 |
3748036 |
Primers |
TRINITY_DN12664_c2_g1_i4 |
Mononucleotide |
(T)11 |
11 |
10459 |
10469 |
1 |
3753894 |
3748036 |
Primers |
TRINITY_DN11811_c0_g3_i3 |
Mononucleotide |
(A)11 |
11 |
788 |
798 |
7 |
3658640 |
3664158 |
Primers |
TRINITY_DN11811_c0_g3_i3 |
Mononucleotide |
(A)11 |
11 |
4561 |
4571 |
7 |
3658640 |
3664158 |
Primers |
TRINITY_DN11450_c3_g2_i3 |
Mononucleotide |
(A)13 |
13 |
5019 |
5031 |
1 |
9318193 |
9314498 |
Primers |
TRINITY_DN13845_c3_g1_i14 |
Mononucleotide |
(A)10 |
10 |
466 |
475 |
6 |
23801646 |
23805088 |
Primers |
TRINITY_DN13845_c3_g1_i14 |
Dinucleotide |
(AG)29 |
58 |
644 |
701 |
6 |
23801646 |
23805088 |
Primers |
TRINITY_DN13845_c3_g1_i14 |
Tetranucleotide |
(ATAG)5 |
20 |
2548 |
2567 |
6 |
23801646 |
23805088 |
Primers |
TRINITY_DN13845_c3_g1_i14 |
Mononucleotide |
(T)11 |
11 |
5973 |
5983 |
6 |
23801646 |
23805088 |
Primers |
TRINITY_DN13996_c1_g8_i3 |
Compound |
(T)10attattataaacgcaagctttcattg(A)10 |
46 |
6086 |
6131 |
4 |
17299621 |
17292914 |
Primers |
TRINITY_DN14576_c1_g1_i3 |
Mononucleotide |
(A)10 |
10 |
6218 |
6227 |
3 |
39461624 |
39459709 |
Primers |
TRINITY_DN14576_c1_g1_i3 |
Mononucleotide |
(A)10 |
10 |
6622 |
6631 |
3 |
39461624 |
39459709 |
Primers |
TRINITY_DN14159_c1_g2_i11 |
Mononucleotide |
(A)11 |
11 |
1156 |
1166 |
5 |
11874334 |
11879907 |
Primers |
TRINITY_DN13908_c0_g1_i47 |
Mononucleotide |
(T)11 |
11 |
4774 |
4784 |
3 |
3227856 |
3230606 |
Primers |
TRINITY_DN13908_c0_g1_i47 |
Mononucleotide |
(T)11 |
11 |
8899 |
8909 |
3 |
3227856 |
3230606 |
Primers |
TRINITY_DN12757_c0_g1_i9 |
Trinucleotide |
(AGA)5 |
15 |
8689 |
8703 |
7 |
2637441 |
2639770 |
Primers |
TRINITY_DN12757_c0_g1_i9 |
Mononucleotide |
(T)21 |
21 |
10084 |
10104 |
7 |
2637441 |
2639770 |
Primers |
TRINITY_DN13398_c2_g2_i3 |
Dinucleotide |
(AC)6 |
12 |
5912 |
5923 |
2 |
1539246 |
1531995 |
Primers |
TRINITY_DN13398_c2_g2_i3 |
Mononucleotide |
(A)12 |
12 |
6689 |
6700 |
2 |
1539246 |
1531995 |
Primers |
TRINITY_DN13398_c2_g2_i3 |
Mononucleotide |
(T)10 |
10 |
8184 |
8193 |
2 |
1539246 |
1531995 |
Primers |
TRINITY_DN11750_c1_g2_i5 |
Dinucleotide |
(AC)9 |
18 |
9664 |
9681 |
6 |
22883427 |
22888116 |
Primers |
TRINITY_DN12165_c1_g1_i32 |
Mononucleotide |
(A)11 |
11 |
4282 |
4292 |
3 |
6704369 |
6701727 |
Primers |
TRINITY_DN13246_c2_g2_i24 |
Mononucleotide |
(T)12 |
12 |
78 |
89 |
3 |
1721672 |
1726920 |
Primers |
TRINITY_DN13246_c2_g2_i24 |
Mononucleotide |
(A)14 |
14 |
460 |
473 |
3 |
1721672 |
1726920 |
Primers |
TRINITY_DN13246_c2_g2_i24 |
Mononucleotide |
(A)17 |
17 |
4729 |
4745 |
3 |
1721672 |
1726920 |
Primers |
TRINITY_DN13246_c2_g2_i24 |
Mononucleotide |
(A)12 |
12 |
5383 |
5394 |
3 |
1721672 |
1726920 |
Primers |
TRINITY_DN13246_c2_g2_i24 |
Mononucleotide |
(T)16 |
16 |
5726 |
5741 |
3 |
1721672 |
1726920 |
Primers |
TRINITY_DN13246_c2_g2_i24 |
Mononucleotide |
(A)12 |
12 |
8250 |
8261 |
3 |
1721672 |
1726920 |
Primers |
TRINITY_DN12332_c1_g2_i13 |
Dinucleotide |
(CT)7 |
14 |
106 |
119 |
2 |
17243831 |
17240714 |
Primers |
TRINITY_DN11216_c0_g5_i5 |
Trinucleotide |
(CAT)6 |
18 |
693 |
710 |
6 |
23397899 |
23403588 |
Primers |
TRINITY_DN11216_c0_g5_i5 |
Trinucleotide |
(GCA)5 |
15 |
7930 |
7944 |
6 |
23397899 |
23403588 |
Primers |
TRINITY_DN11216_c0_g5_i5 |
Mononucleotide |
(T)11 |
11 |
8832 |
8842 |
6 |
23397899 |
23403588 |
Primers |
TRINITY_DN11216_c0_g5_i5 |
Dinucleotide |
(AT)15 |
30 |
9052 |
9081 |
6 |
23397899 |
23403588 |
Primers |
TRINITY_DN11216_c0_g5_i5 |
Mononucleotide |
(T)10 |
10 |
9572 |
9581 |
6 |
23397899 |
23403588 |
Primers |
TRINITY_DN11216_c0_g1_i3 |
Mononucleotide |
(A)10 |
10 |
285 |
294 |
6 |
23403588 |
23397899 |
Primers |
TRINITY_DN11216_c0_g1_i3 |
Dinucleotide |
(AT)15 |
30 |
785 |
814 |
6 |
23403588 |
23397899 |
Primers |
TRINITY_DN11216_c0_g1_i3 |
Mononucleotide |
(A)11 |
11 |
1024 |
1034 |
6 |
23403588 |
23397899 |
Primers |
TRINITY_DN11216_c0_g1_i3 |
Trinucleotide |
(TGC)5 |
15 |
1922 |
1936 |
6 |
23403588 |
23397899 |
Primers |
TRINITY_DN11216_c0_g1_i3 |
Trinucleotide |
(ATG)6 |
18 |
9156 |
9173 |
6 |
23403588 |
23397899 |
Primers |
TRINITY_DN12535_c0_g1_i5 |
Tetranucleotide |
(TTTC)6 |
24 |
50 |
73 |
7 |
286467 |
281697 |
Primers |
TRINITY_DN12535_c0_g1_i5 |
Dinucleotide |
(GA)6 |
12 |
472 |
483 |
7 |
286467 |
281697 |
Primers |
TRINITY_DN12535_c0_g1_i5 |
Mononucleotide |
(T)10 |
10 |
5303 |
5312 |
7 |
286467 |
281697 |
Primers |
TRINITY_DN14486_c2_g2_i2 |
Compound |
(T)11aagaaataggaaccaaaatgataatgcatctcttcattgta(T)10 |
62 |
5622 |
5683 |
1 |
22428429 |
22433147 |
Primers |
TRINITY_DN14486_c2_g2_i2 |
Mononucleotide |
(A)10 |
10 |
8466 |
8475 |
1 |
22428429 |
22433147 |
Primers |
TRINITY_DN14066_c1_g1_i13 |
Mononucleotide |
(A)10 |
10 |
524 |
533 |
5 |
20419094 |
20416221 |
Primers |
TRINITY_DN14066_c1_g1_i13 |
Compound |
(A)14tgtactcgctccagtttgagctactgttc(T)10 |
53 |
4538 |
4590 |
5 |
20419094 |
20416221 |
Primers |
TRINITY_DN14066_c1_g1_i13 |
Mononucleotide |
(A)28 |
28 |
5301 |
5328 |
5 |
20419094 |
20416221 |
Primers |
TRINITY_DN12254_c1_g2_i13 |
Dinucleotide |
(CA)7 |
14 |
3799 |
3812 |
4 |
6623649 |
6630225 |
Primers |
TRINITY_DN12254_c1_g2_i13 |
Mononucleotide |
(A)13 |
13 |
6952 |
6964 |
4 |
6623649 |
6630225 |
Primers |
TRINITY_DN13828_c2_g2_i16 |
Dinucleotide |
(AT)6 |
12 |
1090 |
1101 |
3 |
29120817 |
29118542 |
Primers |
TRINITY_DN13828_c2_g2_i16 |
Mononucleotide |
(A)13 |
13 |
1261 |
1273 |
3 |
29120817 |
29118542 |
Primers |
TRINITY_DN13828_c2_g2_i16 |
Dinucleotide |
(AC)9 |
18 |
1966 |
1983 |
3 |
29120817 |
29118542 |
Primers |
TRINITY_DN13828_c2_g2_i16 |
Dinucleotide |
(AT)11 |
22 |
4304 |
4325 |
3 |
29120817 |
29118542 |
Primers |
TRINITY_DN13828_c2_g2_i16 |
Mononucleotide |
(T)10 |
10 |
7175 |
7184 |
3 |
29120817 |
29118542 |
Primers |
TRINITY_DN13641_c3_g2_i2 |
Trinucleotide |
(AAT)6 |
18 |
215 |
232 |
6 |
3580639 |
3586108 |
Primers |
TRINITY_DN13641_c3_g2_i2 |
Mononucleotide |
(A)16 |
16 |
9214 |
9229 |
6 |
3580639 |
3586108 |
Primers |
TRINITY_DN13401_c0_g1_i20 |
Mononucleotide |
(T)10 |
10 |
1214 |
1223 |
6 |
27090322 |
27099956 |
Primers |
TRINITY_DN13401_c0_g1_i20 |
Mononucleotide |
(A)10 |
10 |
3659 |
3668 |
6 |
27090322 |
27099956 |
Primers |
TRINITY_DN13401_c0_g1_i20 |
Trinucleotide |
(TAT)6 |
18 |
8257 |
8274 |
6 |
27090322 |
27099956 |
Primers |
TRINITY_DN13401_c0_g1_i20 |
Mononucleotide |
(T)10 |
10 |
9572 |
9581 |
6 |
27090322 |
27099956 |
Primers |
TRINITY_DN12977_c0_g1_i17 |
Mononucleotide |
(T)12 |
12 |
4760 |
4771 |
6 |
20883528 |
20890635 |
Primers |
TRINITY_DN12977_c0_g1_i17 |
Mononucleotide |
(A)10 |
10 |
6626 |
6635 |
6 |
20883528 |
20890635 |
Primers |
TRINITY_DN12977_c0_g1_i17 |
Dinucleotide |
(AT)8 |
16 |
7620 |
7635 |
6 |
20883528 |
20890635 |
Primers |
TRINITY_DN14226_c1_g1_i7 |
Compound |
(AG)14c(GA)11gc(GA)11 |
75 |
9526 |
9600 |
2 |
18632281 |
18624955 |
Primers |
TRINITY_DN12445_c0_g1_i18 |
Mononucleotide |
(T)10 |
10 |
4834 |
4843 |
5 |
12975281 |
12970294 |
Primers |
TRINITY_DN11972_c1_g2_i20 |
Compound |
(TC)13(AC)13 |
52 |
2463 |
2514 |
1 |
6299108 |
6294972 |
Primers |
TRINITY_DN12447_c1_g7_i3 |
Mononucleotide |
(A)14 |
14 |
8925 |
8938 |
2 |
11328239 |
11333596 |
Primers |
TRINITY_DN13072_c6_g1_i18 |
Trinucleotide |
(GAT)5 |
15 |
292 |
306 |
2 |
19829548 |
19825328 |
Primers |
TRINITY_DN13072_c6_g1_i18 |
Mononucleotide |
(A)11 |
11 |
1398 |
1408 |
2 |
19829548 |
19825328 |
Primers |
TRINITY_DN13072_c6_g1_i18 |
Dinucleotide |
(AC)7 |
14 |
3238 |
3251 |
2 |
19829548 |
19825328 |
Primers |
TRINITY_DN13072_c6_g1_i18 |
Mononucleotide |
(A)10 |
10 |
9518 |
9527 |
2 |
19829548 |
19825328 |
Primers |
TRINITY_DN14388_c2_g1_i12 |
Compound |
(T)11ctttttttttccctcaatgaaaaacaattgtttctatcaaataac(AAT)5 |
71 |
4 |
74 |
1 |
18448830 |
18452974 |
Primers |
TRINITY_DN14388_c2_g1_i12 |
Dinucleotide |
(AG)6 |
12 |
3949 |
3960 |
1 |
18448830 |
18452974 |
Primers |
TRINITY_DN14388_c2_g1_i12 |
Hexanucleotide |
(TTGGGG)6 |
36 |
8018 |
8053 |
1 |
18448830 |
18452974 |
Primers |
TRINITY_DN12128_c0_g1_i4 |
Dinucleotide |
(CT)12 |
24 |
7727 |
7750 |
7 |
10262087 |
10264022 |
Primers |
TRINITY_DN14714_c2_g2_i9 |
Mononucleotide |
(T)11 |
11 |
1479 |
1489 |
3 |
17331859 |
17331560 |
Primers |
TRINITY_DN14714_c2_g2_i9 |
Mononucleotide |
(T)12 |
12 |
3311 |
3322 |
3 |
17331859 |
17331560 |
Primers |
TRINITY_DN12882_c4_g1_i1 |
Mononucleotide |
(A)15 |
15 |
2052 |
2066 |
1 |
12848066 |
12841309 |
Primers |
TRINITY_DN12882_c4_g1_i1 |
Mononucleotide |
(T)11 |
11 |
2872 |
2882 |
1 |
12848066 |
12841309 |
Primers |
TRINITY_DN12882_c4_g1_i1 |
Mononucleotide |
(A)12 |
12 |
7360 |
7371 |
1 |
12848066 |
12841309 |
Primers |
TRINITY_DN12882_c4_g1_i1 |
Mononucleotide |
(A)10 |
10 |
7970 |
7979 |
1 |
12848066 |
12841309 |
Primers |
TRINITY_DN11232_c1_g2_i4 |
Dinucleotide |
(AG)7 |
14 |
365 |
378 |
4 |
4710024 |
4716938 |
Primers |
TRINITY_DN11232_c1_g2_i4 |
Dinucleotide |
(TA)15 |
30 |
5108 |
5137 |
4 |
4710024 |
4716938 |
Primers |
TRINITY_DN11232_c1_g2_i4 |
Mononucleotide |
(T)10 |
10 |
5321 |
5330 |
4 |
4710024 |
4716938 |
Primers |
TRINITY_DN11232_c1_g2_i4 |
Mononucleotide |
(A)18 |
18 |
5581 |
5598 |
4 |
4710024 |
4716938 |
Primers |
TRINITY_DN11232_c1_g2_i4 |
Mononucleotide |
(A)10 |
10 |
6026 |
6035 |
4 |
4710024 |
4716938 |
Primers |
TRINITY_DN11232_c1_g2_i4 |
Dinucleotide |
(TA)7 |
14 |
6602 |
6615 |
4 |
4710024 |
4716938 |
Primers |
TRINITY_DN13980_c0_g1_i3 |
Dinucleotide |
(TA)14 |
28 |
331 |
358 |
2 |
18220340 |
18218221 |
Primers |
TRINITY_DN13961_c3_g1_i9 |
Mononucleotide |
(A)10 |
10 |
679 |
688 |
7 |
15094043 |
15089999 |
Primers |
TRINITY_DN13961_c3_g1_i9 |
Mononucleotide |
(A)11 |
11 |
1941 |
1951 |
7 |
15094043 |
15089999 |
Primers |
TRINITY_DN14288_c0_g1_i15 |
Mononucleotide |
(T)10 |
10 |
2814 |
2823 |
4 |
23181511 |
23176709 |
Primers |
TRINITY_DN13027_c0_g3_i7 |
Mononucleotide |
(A)40 |
40 |
1 |
40 |
3 |
3200830 |
3196484 |
Primers |
TRINITY_DN13027_c0_g3_i7 |
Dinucleotide |
(AT)7 |
14 |
5956 |
5969 |
3 |
3200830 |
3196484 |
Primers |
TRINITY_DN13027_c0_g3_i7 |
Mononucleotide |
(A)10 |
10 |
8118 |
8127 |
3 |
3200830 |
3196484 |
Primers |
TRINITY_DN14367_c0_g1_i27 |
Mononucleotide |
(A)10 |
10 |
406 |
415 |
3 |
231981 |
227930 |
Primers |
TRINITY_DN14367_c0_g1_i27 |
Mononucleotide |
(T)10 |
10 |
3746 |
3755 |
3 |
231981 |
227930 |
Primers |
TRINITY_DN14367_c0_g1_i27 |
Trinucleotide |
(AAT)5 |
15 |
7935 |
7949 |
3 |
231981 |
227930 |
Primers |
TRINITY_DN14609_c1_g3_i13 |
Mononucleotide |
(A)12 |
12 |
5516 |
5527 |
1 |
447822 |
450400 |
Primers |
TRINITY_DN14609_c1_g3_i13 |
Mononucleotide |
(A)15 |
15 |
7181 |
7195 |
1 |
447822 |
450400 |
Primers |
TRINITY_DN11291_c0_g3_i11 |
Mononucleotide |
(A)10 |
10 |
9210 |
9219 |
3 |
37385789 |
37380284 |
Primers |
TRINITY_DN13274_c0_g1_i23 |
Mononucleotide |
(T)16 |
16 |
764 |
779 |
1 |
13381862 |
13378008 |
Primers |
TRINITY_DN13274_c0_g1_i23 |
Dinucleotide |
(GA)7 |
14 |
6943 |
6956 |
1 |
13381862 |
13378008 |
Primers |
TRINITY_DN14548_c0_g1_i2 |
Mononucleotide |
(T)12 |
12 |
415 |
426 |
5 |
26086573 |
26084805 |
Primers |
TRINITY_DN14548_c0_g1_i2 |
Trinucleotide |
(ATC)5 |
15 |
3537 |
3551 |
5 |
26086573 |
26084805 |
Primers |
TRINITY_DN14548_c0_g1_i2 |
Compound |
(A)11gaccccactgacctaaataccaagtgaaatttatagcaattagtaatttattaggtgatctaaaattatatatcattaatgtccaataaccaag(A)10 |
115 |
8228 |
8342 |
5 |
26086573 |
26084805 |
Primers |
TRINITY_DN13931_c0_g1_i14 |
Mononucleotide |
(T)13 |
13 |
3942 |
3954 |
6 |
18522632 |
18520984 |
Primers |
TRINITY_DN13931_c0_g1_i14 |
Trinucleotide |
(ATG)6 |
18 |
8943 |
8960 |
6 |
18522632 |
18520984 |
Primers |
TRINITY_DN12586_c2_g2_i10 |
Trinucleotide |
(TCT)11 |
33 |
39 |
71 |
5 |
4184042 |
4180596 |
Primers |
TRINITY_DN12586_c2_g2_i10 |
Dinucleotide |
(AT)8 |
16 |
5721 |
5736 |
5 |
4184042 |
4180596 |
Primers |
TRINITY_DN14178_c1_g3_i22 |
Mononucleotide |
(A)13 |
13 |
4705 |
4717 |
1 |
24458281 |
24455108 |
Primers |
TRINITY_DN13250_c0_g2_i19 |
Dinucleotide |
(AT)7 |
14 |
3805 |
3818 |
2 |
5222970 |
5225671 |
Primers |
TRINITY_DN13250_c0_g2_i19 |
Trinucleotide |
(CTT)5 |
15 |
5554 |
5568 |
2 |
5222970 |
5225671 |
Primers |
TRINITY_DN13250_c0_g2_i19 |
Compound |
(T)17a(AT)6 |
30 |
5803 |
5832 |
2 |
5222970 |
5225671 |
Primers |
TRINITY_DN13110_c1_g2_i26 |
Dinucleotide |
(TA)8 |
16 |
1058 |
1073 |
1 |
21637085 |
21632027 |
Primers |
TRINITY_DN13110_c1_g2_i26 |
Mononucleotide |
(T)11 |
11 |
4934 |
4944 |
1 |
21637085 |
21632027 |
Primers |
TRINITY_DN13110_c1_g2_i26 |
Mononucleotide |
(A)10 |
10 |
5461 |
5470 |
1 |
21637085 |
21632027 |
Primers |
TRINITY_DN13089_c1_g2_i13 |
Mononucleotide |
(T)10 |
10 |
998 |
1007 |
3 |
6218777 |
6220585 |
Primers |
TRINITY_DN13089_c1_g2_i13 |
Mononucleotide |
(A)10 |
10 |
8600 |
8609 |
3 |
6218777 |
6220585 |
Primers |
TRINITY_DN13089_c1_g2_i13 |
Dinucleotide |
(AG)6 |
12 |
8744 |
8755 |
3 |
6218777 |
6220585 |
Primers |
TRINITY_DN14251_c2_g1_i49 |
Mononucleotide |
(T)12 |
12 |
8670 |
8681 |
3 |
30939880 |
30943207 |
Primers |
TRINITY_DN12753_c2_g1_i10 |
Mononucleotide |
(A)10 |
10 |
52 |
61 |
4 |
15201669 |
15197853 |
Primers |
TRINITY_DN12753_c2_g1_i10 |
Mononucleotide |
(A)15 |
15 |
849 |
863 |
4 |
15201669 |
15197853 |
Primers |
TRINITY_DN12753_c2_g1_i10 |
Mononucleotide |
(A)17 |
17 |
7996 |
8012 |
4 |
15201669 |
15197853 |
Primers |
TRINITY_DN12753_c2_g1_i10 |
Compound |
(GA)6caaaatt(GA)14 |
47 |
8963 |
9009 |
4 |
15201669 |
15197853 |
Primers |
TRINITY_DN14553_c0_g2_i2 |
Mononucleotide |
(T)13 |
13 |
6830 |
6842 |
2 |
11533226 |
11530761 |
Primers |
TRINITY_DN13827_c3_g1_i5 |
Compound |
(A)10tcaaagatctttgcagtgggctgcaagcaaaatac(A)10 |
55 |
415 |
469 |
2 |
4687264 |
4690027 |
Primers |
TRINITY_DN13827_c3_g1_i5 |
Trinucleotide |
(ATT)5 |
15 |
6674 |
6688 |
2 |
4687264 |
4690027 |
Primers |
TRINITY_DN13827_c3_g1_i5 |
Mononucleotide |
(A)27 |
27 |
8829 |
8855 |
2 |
4687264 |
4690027 |
Primers |
TRINITY_DN14173_c0_g1_i1 |
Mononucleotide |
(T)11 |
11 |
1710 |
1720 |
2 |
16224183 |
16232066 |
Primers |
TRINITY_DN14267_c3_g1_i13 |
Trinucleotide |
(GAA)5 |
15 |
6339 |
6353 |
7 |
12777979 |
12775509 |
Primers |
TRINITY_DN14267_c3_g1_i13 |
Trinucleotide |
(AAG)5 |
15 |
7609 |
7623 |
7 |
12777979 |
12775509 |
Primers |
TRINITY_DN14257_c0_g2_i22 |
Mononucleotide |
(A)10 |
10 |
3992 |
4001 |
3 |
27120764 |
27124242 |
Primers |
TRINITY_DN14257_c0_g2_i22 |
Trinucleotide |
(AAT)7 |
21 |
7938 |
7958 |
3 |
27120764 |
27124242 |
Primers |
TRINITY_DN13778_c2_g1_i15 |
Mononucleotide |
(T)18 |
18 |
1822 |
1839 |
2 |
2414465 |
2411849 |
Primers |
TRINITY_DN13778_c2_g1_i15 |
Mononucleotide |
(A)10 |
10 |
2266 |
2275 |
2 |
2414465 |
2411849 |
Primers |
TRINITY_DN13778_c2_g1_i15 |
Mononucleotide |
(A)10 |
10 |
6683 |
6692 |
2 |
2414465 |
2411849 |
Primers |
TRINITY_DN13778_c2_g1_i15 |
Mononucleotide |
(A)11 |
11 |
7354 |
7364 |
2 |
2414465 |
2411849 |
Primers |
TRINITY_DN14570_c2_g1_i11 |
Trinucleotide |
(TTC)6 |
18 |
191 |
208 |
1 |
1127117 |
1122026 |
Primers |
TRINITY_DN14570_c2_g1_i11 |
Mononucleotide |
(A)13 |
13 |
2433 |
2445 |
1 |
1127117 |
1122026 |
Primers |
TRINITY_DN14570_c2_g1_i11 |
Mononucleotide |
(A)10 |
10 |
2759 |
2768 |
1 |
1127117 |
1122026 |
Primers |
TRINITY_DN14570_c2_g1_i11 |
Mononucleotide |
(A)12 |
12 |
3435 |
3446 |
1 |
1127117 |
1122026 |
Primers |
TRINITY_DN12026_c0_g1_i7 |
Mononucleotide |
(A)10 |
10 |
8671 |
8680 |
2 |
15659702 |
15664992 |
Primers |
TRINITY_DN13352_c2_g1_i3 |
Compound |
(TCT)5tcatcatcttccactcctcttccctctcttctccatctcttcctttcattctt(TC)6tacacaccatgaaatatccattcccatactgataattcccccta(T)10 |
134 |
68 |
201 |
6 |
12449248 |
12451982 |
Primers |
TRINITY_DN13352_c2_g1_i3 |
Mononucleotide |
(A)10 |
10 |
2616 |
2625 |
6 |
12449248 |
12451982 |
Primers |
TRINITY_DN13352_c2_g1_i3 |
Mononucleotide |
(A)11 |
11 |
3063 |
3073 |
6 |
12449248 |
12451982 |
Primers |
TRINITY_DN13352_c2_g1_i3 |
Mononucleotide |
(A)10 |
10 |
4276 |
4285 |
6 |
12449248 |
12451982 |
Primers |
TRINITY_DN13863_c3_g1_i6 |
Trinucleotide |
(GTG)5 |
15 |
8533 |
8547 |
3 |
37861266 |
37863687 |
Primers |
TRINITY_DN13194_c0_g1_i17 |
Mononucleotide |
(A)12 |
12 |
38 |
49 |
3 |
28066341 |
28068395 |
Primers |
TRINITY_DN13194_c0_g1_i17 |
Mononucleotide |
(T)10 |
10 |
260 |
269 |
3 |
28066341 |
28068395 |
Primers |
TRINITY_DN14169_c1_g2_i21 |
Trinucleotide |
(CTT)9 |
27 |
8760 |
8786 |
7 |
246499 |
250569 |
Primers |
TRINITY_DN14169_c1_g2_i21 |
Dinucleotide |
(AG)7 |
14 |
8907 |
8920 |
7 |
246499 |
250569 |
Primers |
TRINITY_DN11367_c2_g1_i7 |
Mononucleotide |
(A)10 |
10 |
2238 |
2247 |
2 |
2430652 |
2433890 |
Primers |
TRINITY_DN11367_c2_g1_i7 |
Trinucleotide |
(ATC)5 |
15 |
2774 |
2788 |
2 |
2430652 |
2433890 |
Primers |
TRINITY_DN11367_c2_g1_i7 |
Mononucleotide |
(A)11 |
11 |
4252 |
4262 |
2 |
2430652 |
2433890 |
Primers |
TRINITY_DN13190_c0_g1_i37 |
Mononucleotide |
(A)10 |
10 |
20 |
29 |
4 |
21023195 |
21025795 |
Primers |
TRINITY_DN13190_c0_g1_i37 |
Mononucleotide |
(A)10 |
10 |
5618 |
5627 |
4 |
21023195 |
21025795 |
Primers |
TRINITY_DN13190_c0_g1_i37 |
Compound |
(AG)6ggaggggg(GA)10 |
40 |
8647 |
8686 |
4 |
21023195 |
21025795 |
Primers |
TRINITY_DN10525_c0_g1_i11 |
Mononucleotide |
(A)11 |
11 |
354 |
364 |
7 |
18356643 |
18351876 |
Primers |
TRINITY_DN14063_c1_g3_i12 |
Mononucleotide |
(A)11 |
11 |
1525 |
1535 |
3 |
6351161 |
6349195 |
Primers |
TRINITY_DN14063_c1_g3_i12 |
Mononucleotide |
(A)11 |
11 |
7688 |
7698 |
3 |
6351161 |
6349195 |
Primers |
TRINITY_DN13235_c1_g1_i1 |
Compound |
(GAA)7agaaagaaatttgatatttgtttcataatcagagaga(AG)7 |
72 |
177 |
248 |
7 |
18077416 |
18073525 |
Primers |
TRINITY_DN13235_c1_g1_i1 |
Trinucleotide |
(TCT)7 |
21 |
362 |
382 |
7 |
18077416 |
18073525 |
Primers |
TRINITY_DN13235_c1_g1_i1 |
Mononucleotide |
(A)10 |
10 |
3857 |
3866 |
7 |
18077416 |
18073525 |
Primers |
TRINITY_DN13235_c1_g1_i1 |
Mononucleotide |
(T)13 |
13 |
4240 |
4252 |
7 |
18077416 |
18073525 |
Primers |
TRINITY_DN13235_c1_g1_i1 |
Mononucleotide |
(T)13 |
13 |
4398 |
4410 |
7 |
18077416 |
18073525 |
Primers |
TRINITY_DN13235_c1_g1_i1 |
Compound |
(T)14ccttttaaggacttgactgttgcacttaatagagtatgatgactagattatagcaaataaa(AAT)5 |
90 |
4536 |
4625 |
7 |
18077416 |
18073525 |
Primers |
TRINITY_DN13235_c1_g1_i1 |
Mononucleotide |
(A)15 |
15 |
5242 |
5256 |
7 |
18077416 |
18073525 |
Primers |
TRINITY_DN14579_c3_g1_i17 |
Dinucleotide |
(TG)6 |
12 |
4735 |
4746 |
7 |
18067798 |
18073659 |
Primers |
TRINITY_DN13784_c0_g1_i16 |
Compound |
(AT)7ttgaattagaatattctaagaaagaaaaaaaactgaatgaaaataatagaaaaaacataaaaataattgaaaaaacagatcctcaaacaaac(T)12 |
118 |
735 |
852 |
7 |
1292654 |
1288193 |
Primers |
TRINITY_DN13784_c0_g1_i16 |
Mononucleotide |
(T)10 |
10 |
1528 |
1537 |
7 |
1292654 |
1288193 |
Primers |
TRINITY_DN12342_c1_g5_i5 |
Mononucleotide |
(T)14 |
14 |
974 |
987 |
3 |
7257894 |
7255336 |
Primers |
TRINITY_DN12732_c0_g1_i1 |
Dinucleotide |
(TC)9 |
18 |
219 |
236 |
3 |
32875484 |
32870573 |
Primers |
TRINITY_DN14182_c1_g5_i10 |
Dinucleotide |
(AT)12 |
24 |
8739 |
8762 |
3 |
37171698 |
37170578 |
Primers |
TRINITY_DN13556_c0_g1_i5 |
Mononucleotide |
(T)10 |
10 |
5473 |
5482 |
6 |
6875283 |
6877527 |
Primers |
TRINITY_DN13734_c1_g2_i22 |
Trinucleotide |
(TTG)5 |
15 |
2511 |
2525 |
3 |
17320604 |
17323337 |
Primers |
TRINITY_DN13734_c1_g2_i22 |
Mononucleotide |
(A)20 |
20 |
3012 |
3031 |
3 |
17320604 |
17323337 |
Primers |
TRINITY_DN12843_c1_g3_i7 |
Trinucleotide |
(GAA)7 |
21 |
67 |
87 |
5 |
6879568 |
6877575 |
Primers |
TRINITY_DN12843_c1_g3_i7 |
Trinucleotide |
(TAT)5 |
15 |
6769 |
6783 |
5 |
6879568 |
6877575 |
Primers |
TRINITY_DN12571_c1_g1_i13 |
Mononucleotide |
(T)13 |
13 |
3374 |
3386 |
6 |
2114366 |
2107793 |
Primers |
TRINITY_DN12571_c1_g1_i13 |
Dinucleotide |
(CT)13 |
26 |
3709 |
3734 |
6 |
2114366 |
2107793 |
Primers |
TRINITY_DN12571_c1_g1_i13 |
Mononucleotide |
(T)11 |
11 |
5715 |
5725 |
6 |
2114366 |
2107793 |
Primers |
TRINITY_DN11801_c0_g1_i18 |
Mononucleotide |
(T)15 |
15 |
357 |
371 |
2 |
19606000 |
19614265 |
Primers |
TRINITY_DN11801_c0_g1_i18 |
Mononucleotide |
(T)12 |
12 |
481 |
492 |
2 |
19606000 |
19614265 |
Primers |
TRINITY_DN13713_c1_g2_i12 |
Mononucleotide |
(T)11 |
11 |
115 |
125 |
1 |
26856541 |
26859644 |
Primers |
TRINITY_DN14315_c0_g1_i25 |
Mononucleotide |
(A)12 |
12 |
62 |
73 |
4 |
21825894 |
21828171 |
Primers |
TRINITY_DN14315_c0_g1_i25 |
Mononucleotide |
(A)24 |
24 |
3619 |
3642 |
4 |
21825894 |
21828171 |
Primers |
TRINITY_DN11788_c2_g2_i3 |
Dinucleotide |
(TC)16 |
32 |
93 |
124 |
6 |
1977999 |
1982780 |
Primers |
TRINITY_DN11788_c2_g2_i3 |
Mononucleotide |
(T)10 |
10 |
4658 |
4667 |
6 |
1977999 |
1982780 |
Primers |
TRINITY_DN13575_c1_g1_i21 |
Mononucleotide |
(T)10 |
10 |
3429 |
3438 |
5 |
27425920 |
27430063 |
Primers |
TRINITY_DN14215_c0_g1_i26 |
Dinucleotide |
(TA)7 |
14 |
947 |
960 |
3 |
8590478 |
8593220 |
Primers |
TRINITY_DN14215_c0_g1_i26 |
Dinucleotide |
(AC)9 |
18 |
6519 |
6536 |
3 |
8590478 |
8593220 |
Primers |
TRINITY_DN13760_c0_g2_i16 |
Mononucleotide |
(T)12 |
12 |
322 |
333 |
3 |
23388796 |
23390401 |
Primers |
TRINITY_DN13760_c0_g2_i16 |
Trinucleotide |
(AAT)5 |
15 |
8601 |
8615 |
3 |
23388796 |
23390401 |
Primers |
TRINITY_DN14245_c1_g1_i9 |
Mononucleotide |
(A)10 |
10 |
4801 |
4810 |
7 |
14765684 |
14763191 |
Primers |
TRINITY_DN14245_c1_g1_i9 |
Mononucleotide |
(T)10 |
10 |
7979 |
7988 |
7 |
14765684 |
14763191 |
Primers |
TRINITY_DN14581_c5_g1_i28 |
Mononucleotide |
(T)10 |
10 |
1954 |
1963 |
1 |
23578258 |
23576880 |
Primers |
TRINITY_DN14581_c5_g1_i28 |
Compound |
(ATAC)5(AT)7 |
34 |
2135 |
2168 |
1 |
23578258 |
23576880 |
Primers |
TRINITY_DN13870_c2_g2_i21 |
Dinucleotide |
(AC)6 |
12 |
1599 |
1610 |
1 |
9711213 |
9716951 |
Primers |
TRINITY_DN13870_c2_g2_i21 |
Dinucleotide |
(TG)7 |
14 |
5115 |
5128 |
1 |
9711213 |
9716951 |
Primers |
TRINITY_DN13870_c2_g2_i21 |
Trinucleotide |
(TTC)7 |
21 |
6356 |
6376 |
1 |
9711213 |
9716951 |
Primers |
TRINITY_DN13351_c4_g1_i2 |
Dinucleotide |
(TC)10 |
20 |
215 |
234 |
7 |
10077809 |
10073357 |
Primers |
TRINITY_DN13351_c4_g1_i2 |
Mononucleotide |
(A)10 |
10 |
3683 |
3692 |
7 |
10077809 |
10073357 |
Primers |
TRINITY_DN14422_c0_g1_i15 |
Mononucleotide |
(T)11 |
11 |
9 |
19 |
6 |
1294231 |
1291076 |
Primers |
TRINITY_DN12221_c1_g1_i4 |
Trinucleotide |
(AGA)5 |
15 |
468 |
482 |
4 |
11563363 |
11557855 |
Primers |
TRINITY_DN12221_c1_g1_i4 |
Mononucleotide |
(T)10 |
10 |
827 |
836 |
4 |
11563363 |
11557855 |
Primers |
TRINITY_DN12221_c1_g1_i4 |
Mononucleotide |
(A)10 |
10 |
2514 |
2523 |
4 |
11563363 |
11557855 |
Primers |
TRINITY_DN12221_c1_g1_i4 |
Mononucleotide |
(A)14 |
14 |
7401 |
7414 |
4 |
11563363 |
11557855 |
Primers |
TRINITY_DN12221_c1_g1_i4 |
Mononucleotide |
(T)11 |
11 |
8028 |
8038 |
4 |
11563363 |
11557855 |
Primers |
TRINITY_DN14594_c2_g1_i3 |
Trinucleotide |
(TCT)16 |
48 |
46 |
93 |
7 |
18839760 |
18837148 |
Primers |
TRINITY_DN14594_c2_g1_i3 |
Tetranucleotide |
(GAGG)6 |
24 |
2953 |
2976 |
7 |
18839760 |
18837148 |
Primers |
TRINITY_DN12948_c2_g1_i17 |
Mononucleotide |
(A)18 |
18 |
279 |
296 |
1 |
855482 |
852032 |
Primers |
TRINITY_DN12948_c2_g1_i17 |
Mononucleotide |
(A)10 |
10 |
4396 |
4405 |
1 |
855482 |
852032 |
Primers |
TRINITY_DN12948_c2_g1_i17 |
Mononucleotide |
(T)19 |
19 |
4562 |
4580 |
1 |
855482 |
852032 |
Primers |
TRINITY_DN12948_c2_g1_i17 |
Mononucleotide |
(A)10 |
10 |
7839 |
7848 |
1 |
855482 |
852032 |
Primers |
TRINITY_DN12948_c2_g1_i17 |
Mononucleotide |
(A)11 |
11 |
8427 |
8437 |
1 |
855482 |
852032 |
Primers |
TRINITY_DN13546_c0_g1_i10 |
Mononucleotide |
(A)10 |
10 |
6512 |
6521 |
6 |
27059965 |
27054476 |
Primers |
TRINITY_DN13546_c0_g1_i10 |
Tetranucleotide |
(TCTT)9 |
36 |
8482 |
8517 |
6 |
27059965 |
27054476 |
Primers |
TRINITY_DN13501_c1_g2_i17 |
Trinucleotide |
(TCA)5 |
15 |
974 |
988 |
1 |
17125483 |
17122152 |
Primers |
TRINITY_DN13501_c1_g2_i17 |
Dinucleotide |
(TA)7 |
14 |
1698 |
1711 |
1 |
17125483 |
17122152 |
Primers |
TRINITY_DN13501_c1_g2_i17 |
Mononucleotide |
(A)16 |
16 |
8358 |
8373 |
1 |
17125483 |
17122152 |
Primers |
TRINITY_DN12117_c2_g2_i7 |
Mononucleotide |
(A)11 |
11 |
5486 |
5496 |
5 |
7599716 |
7603156 |
Primers |
TRINITY_DN12117_c2_g2_i7 |
Dinucleotide |
(GA)6 |
12 |
8374 |
8385 |
5 |
7599716 |
7603156 |
Primers |
TRINITY_DN13228_c1_g1_i24 |
Compound |
(GA)7taagaaaagaaaagaggaaagagac(T)10 |
49 |
8434 |
8482 |
3 |
1981256 |
1979485 |
Primers |
TRINITY_DN14559_c4_g1_i9 |
Dinucleotide |
(CT)9 |
18 |
814 |
831 |
6 |
22286694 |
22291346 |
Primers |
TRINITY_DN14559_c4_g1_i9 |
Mononucleotide |
(A)11 |
11 |
4943 |
4953 |
6 |
22286694 |
22291346 |
Primers |
TRINITY_DN13401_c0_g2_i10 |
Trinucleotide |
(GCA)8 |
24 |
208 |
231 |
3 |
7182234 |
7180102 |
Primers |
TRINITY_DN11559_c4_g1_i22 |
Mononucleotide |
(T)16 |
16 |
3502 |
3517 |
4 |
10646221 |
10640938 |
Primers |
TRINITY_DN13646_c0_g1_i20 |
Trinucleotide |
(AAT)7 |
21 |
2422 |
2442 |
6 |
24537011 |
24539345 |
Primers |
TRINITY_DN13646_c0_g1_i20 |
Mononucleotide |
(T)11 |
11 |
2823 |
2833 |
6 |
24537011 |
24539345 |
Primers |
TRINITY_DN13646_c0_g1_i20 |
Mononucleotide |
(T)15 |
15 |
4783 |
4797 |
6 |
24537011 |
24539345 |
Primers |
TRINITY_DN13646_c0_g1_i20 |
Trinucleotide |
(TTA)6 |
18 |
8338 |
8355 |
6 |
24537011 |
24539345 |
Primers |
TRINITY_DN12562_c1_g4_i4 |
Mononucleotide |
(T)16 |
16 |
4079 |
4094 |
6 |
16838356 |
16834900 |
Primers |
TRINITY_DN12562_c1_g4_i4 |
Trinucleotide |
(TCT)6 |
18 |
8216 |
8233 |
6 |
16838356 |
16834900 |
Primers |
TRINITY_DN12310_c1_g1_i21 |
Mononucleotide |
(T)10 |
10 |
7769 |
7778 |
6 |
7549634 |
7552493 |
Primers |
TRINITY_DN12310_c1_g1_i21 |
Compound |
(AAG)5(A)10 |
25 |
7881 |
7905 |
6 |
7549634 |
7552493 |
Primers |
TRINITY_DN12310_c1_g1_i21 |
Mononucleotide |
(A)16 |
16 |
8077 |
8092 |
6 |
7549634 |
7552493 |
Primers |
TRINITY_DN14053_c0_g1_i28 |
Trinucleotide |
(AGC)15 |
45 |
7352 |
7396 |
1 |
788636 |
791810 |
Primers |
TRINITY_DN13551_c0_g1_i1 |
Mononucleotide |
(A)16 |
16 |
2014 |
2029 |
7 |
17995804 |
17998550 |
Primers |
TRINITY_DN14520_c0_g1_i15 |
Mononucleotide |
(T)12 |
12 |
2866 |
2877 |
7 |
8994743 |
8992769 |
Primers |
TRINITY_DN14416_c1_g3_i8 |
Mononucleotide |
(A)13 |
13 |
110 |
122 |
3 |
7916496 |
7914572 |
Primers |
TRINITY_DN14197_c0_g1_i33 |
Mononucleotide |
(T)12 |
12 |
6526 |
6537 |
5 |
6355561 |
6353625 |
Primers |
TRINITY_DN13583_c3_g2_i4 |
Dinucleotide |
(TA)6 |
12 |
7872 |
7883 |
2 |
17652770 |
17650572 |
Primers |
TRINITY_DN13703_c2_g2_i8 |
Compound |
(TTC)5tactactacttt(TTC)12 |
63 |
244 |
306 |
6 |
14714964 |
14712390 |
Primers |
TRINITY_DN13703_c2_g2_i8 |
Dinucleotide |
(CT)10 |
20 |
3140 |
3159 |
6 |
14714964 |
14712390 |
Primers |
TRINITY_DN12772_c0_g2_i5 |
Mononucleotide |
(A)10 |
10 |
3060 |
3069 |
3 |
30709534 |
30712973 |
Primers |
TRINITY_DN12772_c0_g2_i5 |
Mononucleotide |
(A)10 |
10 |
3231 |
3240 |
3 |
30709534 |
30712973 |
Primers |
TRINITY_DN12772_c0_g2_i5 |
Tetranucleotide |
(AGAA)6 |
24 |
3374 |
3397 |
3 |
30709534 |
30712973 |
Primers |
TRINITY_DN12772_c0_g2_i5 |
Mononucleotide |
(T)10 |
10 |
3597 |
3606 |
3 |
30709534 |
30712973 |
Primers |
TRINITY_DN12772_c0_g2_i5 |
Trinucleotide |
(AAT)5 |
15 |
4247 |
4261 |
3 |
30709534 |
30712973 |
Primers |
TRINITY_DN12772_c0_g2_i5 |
Trinucleotide |
(AGA)5 |
15 |
8163 |
8177 |
3 |
30709534 |
30712973 |
Primers |
TRINITY_DN14210_c0_g2_i23 |
Mononucleotide |
(T)11 |
11 |
7506 |
7516 |
3 |
30491889 |
30494532 |
Primers |
TRINITY_DN14210_c0_g2_i23 |
Mononucleotide |
(C)14 |
14 |
8247 |
8260 |
3 |
30491889 |
30494532 |
Primers |
TRINITY_DN14304_c1_g1_i11 |
Dinucleotide |
(TA)6 |
12 |
559 |
570 |
5 |
26836386 |
26832702 |
Primers |
TRINITY_DN13767_c1_g1_i17 |
Compound |
(T)15ggctttctta(TG)7 |
39 |
3970 |
4008 |
3 |
30586514 |
30583872 |
Primers |
TRINITY_DN13767_c1_g1_i17 |
Mononucleotide |
(T)10 |
10 |
6934 |
6943 |
3 |
30586514 |
30583872 |
Primers |
TRINITY_DN13767_c1_g1_i17 |
Mononucleotide |
(T)10 |
10 |
7783 |
7792 |
3 |
30586514 |
30583872 |
Primers |
TRINITY_DN13767_c1_g1_i17 |
Trinucleotide |
(TGG)6 |
18 |
7993 |
8010 |
3 |
30586514 |
30583872 |
Primers |
TRINITY_DN14118_c0_g1_i25 |
Mononucleotide |
(A)10 |
10 |
5074 |
5083 |
3 |
27508583 |
27511454 |
Primers |
TRINITY_DN12034_c2_g4_i5 |
Mononucleotide |
(A)14 |
14 |
102 |
115 |
5 |
12469031 |
12472336 |
Primers |
TRINITY_DN12034_c2_g4_i5 |
Dinucleotide |
(AG)10 |
20 |
270 |
289 |
5 |
12469031 |
12472336 |
Primers |
TRINITY_DN12034_c2_g4_i5 |
Compound |
(T)11ctttttcacattaattattatcatccttttttcc(T)12cattatattttccaaattttccgtaattag(T)20 |
107 |
2141 |
2247 |
5 |
12469031 |
12472336 |
Primers |
TRINITY_DN12034_c2_g4_i5 |
Mononucleotide |
(A)11 |
11 |
5057 |
5067 |
5 |
12469031 |
12472336 |
Primers |
TRINITY_DN13899_c1_g2_i3 |
Dinucleotide |
(GA)8 |
16 |
8163 |
8178 |
1 |
1314917 |
1317556 |
Primers |
TRINITY_DN12835_c0_g2_i7 |
Mononucleotide |
(T)10 |
10 |
210 |
219 |
2 |
17370076 |
17366960 |
Primers |
TRINITY_DN12835_c0_g2_i7 |
Mononucleotide |
(T)14 |
14 |
983 |
996 |
2 |
17370076 |
17366960 |
Primers |
TRINITY_DN11065_c0_g3_i2 |
Mononucleotide |
(A)10 |
10 |
1587 |
1596 |
2 |
22464092 |
22472283 |
Primers |
TRINITY_DN11065_c0_g3_i2 |
Mononucleotide |
(T)10 |
10 |
4791 |
4800 |
2 |
22464092 |
22472283 |
Primers |
TRINITY_DN11065_c0_g3_i2 |
Mononucleotide |
(T)12 |
12 |
8059 |
8070 |
2 |
22464092 |
22472283 |
Primers |
TRINITY_DN11405_c1_g1_i3 |
Mononucleotide |
(A)11 |
11 |
7835 |
7845 |
3 |
26314148 |
26317446 |
Primers |
TRINITY_DN13881_c3_g2_i4 |
Mononucleotide |
(A)14 |
14 |
3072 |
3085 |
2 |
1310593 |
1307769 |
Primers |
TRINITY_DN13881_c3_g2_i4 |
Mononucleotide |
(T)12 |
12 |
3671 |
3682 |
2 |
1310593 |
1307769 |
Primers |
TRINITY_DN13881_c3_g2_i4 |
Dinucleotide |
(TG)6 |
12 |
5570 |
5581 |
2 |
1310593 |
1307769 |
Primers |
TRINITY_DN13881_c3_g2_i4 |
Compound |
(T)13(G)11 |
24 |
8141 |
8164 |
2 |
1310593 |
1307769 |
Primers |
TRINITY_DN11652_c0_g1_i2 |
Dinucleotide |
(TC)7 |
14 |
2923 |
2936 |
4 |
1987987 |
1991805 |
Primers |
TRINITY_DN11652_c0_g1_i2 |
Mononucleotide |
(T)10 |
10 |
6535 |
6544 |
4 |
1987987 |
1991805 |
Primers |
TRINITY_DN11652_c0_g1_i2 |
Mononucleotide |
(T)10 |
10 |
7920 |
7929 |
4 |
1987987 |
1991805 |
Primers |
TRINITY_DN14540_c2_g1_i18 |
Mononucleotide |
(A)16 |
16 |
443 |
458 |
5 |
27128473 |
27127137 |
Primers |
TRINITY_DN14241_c0_g2_i18 |
Compound |
(T)10ctagaaacaaattgatgtctaccaagggacttccagaacatttaactctttttgaaataaaagtaagaatctcattc(T)10 |
97 |
5967 |
6063 |
1 |
28402909 |
28404969 |
Primers |
TRINITY_DN12499_c0_g3_i31 |
Mononucleotide |
(C)13 |
13 |
3780 |
3792 |
6 |
12052598 |
12056834 |
Primers |
TRINITY_DN12499_c0_g3_i31 |
Mononucleotide |
(A)10 |
10 |
3936 |
3945 |
6 |
12052598 |
12056834 |
Primers |
TRINITY_DN12499_c0_g3_i31 |
Mononucleotide |
(A)10 |
10 |
7937 |
7946 |
6 |
12052598 |
12056834 |
Primers |
TRINITY_DN13613_c1_g1_i3 |
Mononucleotide |
(A)11 |
11 |
821 |
831 |
6 |
4095690 |
4092499 |
Primers |
TRINITY_DN13613_c1_g1_i3 |
Mononucleotide |
(T)12 |
12 |
2790 |
2801 |
6 |
4095690 |
4092499 |
Primers |
TRINITY_DN13613_c1_g1_i3 |
Mononucleotide |
(A)15 |
15 |
5226 |
5240 |
6 |
4095690 |
4092499 |
Primers |
TRINITY_DN12492_c1_g1_i22 |
Dinucleotide |
(GA)6 |
12 |
1846 |
1857 |
5 |
23518975 |
23514746 |
Primers |
TRINITY_DN13413_c1_g2_i6 |
Dinucleotide |
(TC)6 |
12 |
116 |
127 |
2 |
6175027 |
6179470 |
Primers |
TRINITY_DN13413_c1_g2_i6 |
Mononucleotide |
(T)10 |
10 |
5461 |
5470 |
2 |
6175027 |
6179470 |
Primers |
TRINITY_DN13413_c1_g2_i6 |
Trinucleotide |
(CTT)10 |
30 |
7335 |
7364 |
2 |
6175027 |
6179470 |
Primers |
TRINITY_DN14637_c0_g1_i3 |
Mononucleotide |
(T)15 |
15 |
5558 |
5572 |
3 |
6036357 |
6036263 |
Primers |
TRINITY_DN14637_c0_g1_i3 |
Mononucleotide |
(T)13 |
13 |
6799 |
6811 |
3 |
6036357 |
6036263 |
Primers |
TRINITY_DN12060_c2_g1_i2 |
Compound |
(CTT)5caccacctccaccaccac(CAT)5 |
48 |
325 |
372 |
1 |
16914223 |
16919123 |
Primers |
TRINITY_DN12060_c2_g1_i2 |
Mononucleotide |
(A)10 |
10 |
7248 |
7257 |
1 |
16914223 |
16919123 |
Primers |
TRINITY_DN12060_c2_g1_i2 |
Compound |
(T)10(A)19 |
29 |
7561 |
7589 |
1 |
16914223 |
16919123 |
Primers |
TRINITY_DN12662_c3_g2_i18 |
Dinucleotide |
(CT)10 |
20 |
1 |
20 |
2 |
9900844 |
9897330 |
Primers |
TRINITY_DN13988_c1_g7_i11 |
Trinucleotide |
(ATC)5 |
15 |
91 |
105 |
6 |
20376567 |
20379546 |
Primers |
TRINITY_DN13988_c1_g7_i11 |
Mononucleotide |
(T)16 |
16 |
1495 |
1510 |
6 |
20376567 |
20379546 |
Primers |
TRINITY_DN11304_c1_g1_i12 |
Trinucleotide |
(TCT)5 |
15 |
56 |
70 |
6 |
8468337 |
8471277 |
Primers |
TRINITY_DN14206_c3_g1_i18 |
Dinucleotide |
(TA)8 |
16 |
7771 |
7786 |
3 |
37051202 |
37048760 |
Primers |
TRINITY_DN14206_c3_g1_i18 |
Mononucleotide |
(A)10 |
10 |
8021 |
8030 |
3 |
37051202 |
37048760 |
Primers |
TRINITY_DN12780_c0_g1_i1 |
Mononucleotide |
(A)10 |
10 |
1274 |
1283 |
1 |
25765298 |
25767552 |
Primers |
TRINITY_DN12780_c0_g1_i1 |
Trinucleotide |
(TAT)6 |
18 |
2082 |
2099 |
1 |
25765298 |
25767552 |
Primers |
TRINITY_DN11625_c5_g1_i9 |
Mononucleotide |
(A)23 |
23 |
7438 |
7460 |
3 |
5391512 |
5399499 |
Primers |
TRINITY_DN11385_c1_g1_i11 |
Mononucleotide |
(T)10 |
10 |
1125 |
1134 |
2 |
20158405 |
20155323 |
Primers |
TRINITY_DN11385_c1_g1_i11 |
Mononucleotide |
(T)11 |
11 |
2336 |
2346 |
2 |
20158405 |
20155323 |
Primers |
TRINITY_DN12970_c1_g1_i15 |
Mononucleotide |
(A)15 |
15 |
880 |
894 |
6 |
19768258 |
19771977 |
Primers |
TRINITY_DN12970_c1_g1_i15 |
Compound |
(T)11caaatcaataaaatttgagggctaacccatttttatatgtgccaaacatatacaactacaccctctttttccttcactgcac(AT)6 |
105 |
1419 |
1523 |
6 |
19768258 |
19771977 |
Primers |
TRINITY_DN12970_c1_g1_i15 |
Trinucleotide |
(GCA)5 |
15 |
2332 |
2346 |
6 |
19768258 |
19771977 |
Primers |
TRINITY_DN12970_c1_g1_i15 |
Trinucleotide |
(GCA)5 |
15 |
3607 |
3621 |
6 |
19768258 |
19771977 |
Primers |
TRINITY_DN12970_c1_g1_i15 |
Mononucleotide |
(A)10 |
10 |
7491 |
7500 |
6 |
19768258 |
19771977 |
Primers |
TRINITY_DN12970_c1_g1_i15 |
Dinucleotide |
(TC)6 |
12 |
7722 |
7733 |
6 |
19768258 |
19771977 |
Primers |
TRINITY_DN13466_c0_g1_i4 |
Dinucleotide |
(AT)6 |
12 |
7436 |
7447 |
2 |
8431874 |
8434571 |
Primers |
TRINITY_DN11838_c2_g1_i8 |
Mononucleotide |
(A)10 |
10 |
1394 |
1403 |
6 |
23718497 |
23723565 |
Primers |
TRINITY_DN12167_c0_g1_i3 |
Mononucleotide |
(A)11 |
11 |
5934 |
5944 |
6 |
16057032 |
16062938 |
Primers |
TRINITY_DN13188_c1_g1_i28 |
Dinucleotide |
(CT)9 |
18 |
49 |
66 |
3 |
25951765 |
25954721 |
Primers |
TRINITY_DN13188_c1_g1_i28 |
Mononucleotide |
(T)10 |
10 |
464 |
473 |
3 |
25951765 |
25954721 |
Primers |
TRINITY_DN13188_c1_g1_i28 |
Dinucleotide |
(TC)7 |
14 |
664 |
677 |
3 |
25951765 |
25954721 |
Primers |
TRINITY_DN13188_c1_g1_i28 |
Compound |
(T)11acgagagggaggggattagg(T)10 |
41 |
4583 |
4623 |
3 |
25951765 |
25954721 |
Primers |
TRINITY_DN11396_c0_g1_i12 |
Mononucleotide |
(T)10 |
10 |
133 |
142 |
1 |
22375057 |
22377424 |
Primers |
TRINITY_DN11396_c0_g1_i12 |
Mononucleotide |
(T)12 |
12 |
274 |
285 |
1 |
22375057 |
22377424 |
Primers |
TRINITY_DN14150_c0_g4_i14 |
Trinucleotide |
(TAT)5 |
15 |
1492 |
1506 |
3 |
30639649 |
30636058 |
Primers |
TRINITY_DN13140_c3_g3_i8 |
Mononucleotide |
(T)10 |
10 |
443 |
452 |
3 |
25777594 |
25773243 |
Primers |
TRINITY_DN13140_c3_g3_i8 |
Mononucleotide |
(A)13 |
13 |
6121 |
6133 |
3 |
25777594 |
25773243 |
Primers |
TRINITY_DN13140_c3_g3_i8 |
Mononucleotide |
(A)12 |
12 |
6309 |
6320 |
3 |
25777594 |
25773243 |
Primers |
TRINITY_DN13754_c0_g3_i2 |
Mononucleotide |
(A)13 |
13 |
34 |
46 |
3 |
39209324 |
39214916 |
Primers |
TRINITY_DN13754_c0_g3_i2 |
Compound |
(T)10attagcttatgagag(AGA)5 |
40 |
1049 |
1088 |
3 |
39209324 |
39214916 |
Primers |
TRINITY_DN13754_c0_g3_i2 |
Dinucleotide |
(GA)12 |
24 |
1571 |
1594 |
3 |
39209324 |
39214916 |
Primers |
TRINITY_DN13754_c0_g3_i2 |
Mononucleotide |
(T)15 |
15 |
2990 |
3004 |
3 |
39209324 |
39214916 |
Primers |
TRINITY_DN13754_c0_g3_i2 |
Mononucleotide |
(A)14 |
14 |
3768 |
3781 |
3 |
39209324 |
39214916 |
Primers |
TRINITY_DN13754_c0_g3_i2 |
Mononucleotide |
(A)12 |
12 |
6362 |
6373 |
3 |
39209324 |
39214916 |
Primers |
TRINITY_DN14694_c6_g1_i3 |
Mononucleotide |
(A)14 |
14 |
26 |
39 |
#N/A |
|
|
Primers |
TRINITY_DN12518_c2_g1_i12 |
Compound |
(TCT)10c(CTT)6ccatttacataacttca(TTC)5 |
81 |
28 |
108 |
3 |
37335324 |
37338567 |
Primers |
TRINITY_DN12518_c2_g1_i12 |
Dinucleotide |
(TA)7 |
14 |
363 |
376 |
3 |
37335324 |
37338567 |
Primers |
TRINITY_DN12518_c2_g1_i12 |
Mononucleotide |
(A)14 |
14 |
7499 |
7512 |
3 |
37335324 |
37338567 |
Primers |
TRINITY_DN14747_c14_g1_i7 |
Mononucleotide |
(T)10 |
10 |
4872 |
4881 |
5 |
971582 |
968770 |
Primers |
TRINITY_DN13164_c0_g2_i2 |
Trinucleotide |
(ATG)5 |
15 |
1656 |
1670 |
7 |
18197609 |
18196097 |
Primers |
TRINITY_DN13712_c0_g1_i8 |
Dinucleotide |
(AT)7 |
14 |
2314 |
2327 |
5 |
7712027 |
7708065 |
Primers |
TRINITY_DN13712_c0_g1_i8 |
Mononucleotide |
(A)10 |
10 |
2605 |
2614 |
5 |
7712027 |
7708065 |
Primers |
TRINITY_DN14069_c2_g1_i21 |
Compound* |
(A)12(AAC)5* |
25 |
6494 |
6518 |
6 |
16258002 |
16259783 |
Primers |
TRINITY_DN14543_c3_g2_i14 |
Mononucleotide |
(A)13 |
13 |
7559 |
7571 |
4 |
13212484 |
13208028 |
Primers |
TRINITY_DN14543_c3_g2_i14 |
Mononucleotide |
(T)15 |
15 |
7681 |
7695 |
4 |
13212484 |
13208028 |
Primers |
TRINITY_DN14543_c3_g2_i14 |
Mononucleotide |
(T)21 |
21 |
7806 |
7826 |
4 |
13212484 |
13208028 |
Primers |
TRINITY_DN14249_c0_g1_i14 |
Dinucleotide |
(AG)11 |
22 |
7791 |
7812 |
7 |
11761446 |
11758312 |
Primers |
TRINITY_DN13773_c0_g1_i4 |
Mononucleotide |
(T)12 |
12 |
5143 |
5154 |
7 |
4693827 |
4690980 |
Primers |
TRINITY_DN13773_c0_g1_i4 |
Mononucleotide |
(A)10 |
10 |
5499 |
5508 |
7 |
4693827 |
4690980 |
Primers |
TRINITY_DN13773_c0_g1_i4 |
Mononucleotide |
(A)11 |
11 |
6509 |
6519 |
7 |
4693827 |
4690980 |
Primers |
TRINITY_DN13773_c0_g1_i4 |
Mononucleotide |
(T)10 |
10 |
7540 |
7549 |
7 |
4693827 |
4690980 |
Primers |
TRINITY_DN13773_c0_g1_i4 |
Mononucleotide |
(A)10 |
10 |
7805 |
7814 |
7 |
4693827 |
4690980 |
Primers |
TRINITY_DN13210_c1_g1_i12 |
Dinucleotide |
(AT)10 |
20 |
6652 |
6671 |
2 |
9840499 |
9843508 |
Primers |
TRINITY_DN12342_c1_g2_i10 |
Compound |
(T)13(A)10 |
23 |
6965 |
6987 |
4 |
3421113 |
3428331 |
Primers |
TRINITY_DN12342_c1_g2_i10 |
Trinucleotide |
(CAA)5 |
15 |
7432 |
7446 |
4 |
3421113 |
3428331 |
Primers |
TRINITY_DN12342_c1_g2_i10 |
Tetranucleotide |
(AAGA)8 |
32 |
7670 |
7701 |
4 |
3421113 |
3428331 |
Primers |
TRINITY_DN13839_c2_g1_i10 |
Trinucleotide |
(CTT)5 |
15 |
671 |
685 |
3 |
3077018 |
3079038 |
Primers |
TRINITY_DN13839_c2_g1_i10 |
Mononucleotide |
(A)10 |
10 |
1248 |
1257 |
3 |
3077018 |
3079038 |
Primers |
TRINITY_DN13839_c2_g1_i10 |
Mononucleotide |
(T)12 |
12 |
6257 |
6268 |
3 |
3077018 |
3079038 |
Primers |
TRINITY_DN13830_c0_g4_i2 |
Mononucleotide |
(A)10 |
10 |
1191 |
1200 |
7 |
8228393 |
8228806 |
Primers |
TRINITY_DN13830_c0_g4_i2 |
Mononucleotide |
(T)15 |
15 |
2085 |
2099 |
7 |
8228393 |
8228806 |
Primers |
TRINITY_DN13830_c0_g4_i2 |
Mononucleotide |
(A)23 |
23 |
2694 |
2716 |
7 |
8228393 |
8228806 |
Primers |
TRINITY_DN13830_c0_g4_i2 |
Mononucleotide |
(T)10 |
10 |
3072 |
3081 |
7 |
8228393 |
8228806 |
Primers |
TRINITY_DN13795_c1_g3_i7 |
Mononucleotide |
(T)23 |
23 |
7757 |
7779 |
3 |
9747462 |
9740951 |
Primers |
TRINITY_DN14589_c2_g1_i1 |
Dinucleotide |
(AG)11 |
22 |
46 |
67 |
7 |
8709010 |
8709997 |
Primers |
TRINITY_DN14589_c2_g1_i1 |
Mononucleotide |
(A)10 |
10 |
1479 |
1488 |
7 |
8709010 |
8709997 |
Primers |
TRINITY_DN12636_c5_g4_i16 |
Dinucleotide |
(AC)6 |
12 |
4425 |
4436 |
6 |
6581290 |
6584763 |
Primers |
TRINITY_DN12636_c5_g4_i16 |
Mononucleotide |
(T)10 |
10 |
4940 |
4949 |
6 |
6581290 |
6584763 |
Primers |
TRINITY_DN11354_c0_g1_i27 |
Mononucleotide |
(A)15 |
15 |
1392 |
1406 |
7 |
15103244 |
15107248 |
Primers |
TRINITY_DN11354_c0_g1_i27 |
Mononucleotide |
(T)12 |
12 |
3180 |
3191 |
7 |
15103244 |
15107248 |
Primers |
TRINITY_DN11354_c0_g1_i27 |
Dinucleotide |
(AT)7 |
14 |
4477 |
4490 |
7 |
15103244 |
15107248 |
Primers |
TRINITY_DN11354_c0_g1_i27 |
Mononucleotide |
(A)10 |
10 |
7696 |
7705 |
7 |
15103244 |
15107248 |
Primers |
TRINITY_DN12095_c1_g2_i13 |
Compound |
(T)13gtatttttgg(T)10 |
33 |
1461 |
1493 |
6 |
14236650 |
14232685 |
Primers |
TRINITY_DN14562_c0_g1_i9 |
Mononucleotide |
(T)10 |
10 |
143 |
152 |
4 |
23044840 |
23046187 |
Primers |
TRINITY_DN14019_c1_g2_i8 |
Mononucleotide |
(A)10 |
10 |
147 |
156 |
6 |
109609 |
107800 |
Primers |
TRINITY_DN13254_c1_g2_i17 |
Mononucleotide |
(T)11 |
11 |
4809 |
4819 |
2 |
1283288 |
1282175 |
Primers |
TRINITY_DN12572_c6_g1_i8 |
Mononucleotide |
(A)10 |
10 |
343 |
352 |
4 |
6913429 |
6917767 |
Primers |
TRINITY_DN12572_c6_g1_i8 |
Mononucleotide |
(A)13 |
13 |
2543 |
2555 |
4 |
6913429 |
6917767 |
Primers |
TRINITY_DN12572_c6_g1_i8 |
Mononucleotide |
(A)10 |
10 |
6138 |
6147 |
4 |
6913429 |
6917767 |
Primers |
TRINITY_DN12572_c6_g1_i8 |
Trinucleotide |
(GTC)5 |
15 |
7345 |
7359 |
4 |
6913429 |
6917767 |
Primers |
TRINITY_DN14445_c5_g1_i4 |
Mononucleotide |
(T)10 |
10 |
1033 |
1042 |
1 |
18497706 |
18499237 |
Primers |
TRINITY_DN14445_c5_g1_i4 |
Mononucleotide |
(T)11 |
11 |
6758 |
6768 |
1 |
18497706 |
18499237 |
Primers |
TRINITY_DN13179_c2_g1_i10 |
Mononucleotide |
(A)10 |
10 |
28 |
37 |
5 |
16549477 |
16547356 |
Primers |
TRINITY_DN13179_c2_g1_i10 |
Mononucleotide |
(T)10 |
10 |
2969 |
2978 |
5 |
16549477 |
16547356 |
Primers |
TRINITY_DN13744_c0_g1_i4 |
Mononucleotide |
(A)10 |
10 |
7183 |
7192 |
1 |
5313962 |
5310515 |
Primers |
TRINITY_DN11841_c2_g1_i5 |
Trinucleotide |
(AGC)5 |
15 |
2728 |
2742 |
2 |
18913579 |
18914765 |
Primers |
TRINITY_DN12506_c0_g2_i2 |
Dinucleotide |
(TA)7 |
14 |
7535 |
7548 |
3 |
36954040 |
36948716 |
Primers |
TRINITY_DN13779_c1_g1_i5 |
Mononucleotide |
(A)21 |
21 |
3 |
23 |
1 |
19073946 |
19072762 |
Primers |
TRINITY_DN13173_c3_g1_i6 |
Trinucleotide |
(CTC)8 |
24 |
302 |
325 |
7 |
7911066 |
7916308 |
Primers |
TRINITY_DN13173_c3_g1_i6 |
Mononucleotide |
(T)16 |
16 |
7638 |
7653 |
7 |
7911066 |
7916308 |
Primers |
TRINITY_DN12845_c1_g4_i1 |
Mononucleotide |
(A)11 |
11 |
87 |
97 |
3 |
29150648 |
29146958 |
Primers |
TRINITY_DN12845_c1_g4_i1 |
Mononucleotide |
(T)16 |
16 |
223 |
238 |
3 |
29150648 |
29146958 |
Primers |
TRINITY_DN12845_c1_g4_i1 |
Mononucleotide |
(A)10 |
10 |
7438 |
7447 |
3 |
29150648 |
29146958 |
Primers |
TRINITY_DN14289_c3_g1_i7 |
Compound |
(A)20g(A)10g(A)11 |
43 |
1859 |
1901 |
3 |
31244327 |
31246889 |
Primers |
TRINITY_DN13800_c0_g1_i9 |
Mononucleotide |
(T)10 |
10 |
5768 |
5777 |
1 |
2751732 |
2747666 |
Primers |
TRINITY_DN13800_c0_g1_i9 |
Mononucleotide |
(T)12 |
12 |
6827 |
6838 |
1 |
2751732 |
2747666 |
Primers |
TRINITY_DN13480_c0_g1_i3 |
Mononucleotide |
(A)11 |
11 |
6257 |
6267 |
3 |
1812593 |
1809553 |
Primers |
TRINITY_DN13480_c0_g1_i3 |
Mononucleotide |
(A)10 |
10 |
6674 |
6683 |
3 |
1812593 |
1809553 |
Primers |
TRINITY_DN12779_c0_g1_i15 |
Mononucleotide |
(T)10 |
10 |
4458 |
4467 |
5 |
27851905 |
27854413 |
Primers |
TRINITY_DN12779_c0_g1_i15 |
Mononucleotide |
(T)14 |
14 |
4810 |
4823 |
5 |
27851905 |
27854413 |
Primers |
TRINITY_DN12779_c0_g1_i15 |
Mononucleotide |
(T)10 |
10 |
5050 |
5059 |
5 |
27851905 |
27854413 |
Primers |
TRINITY_DN12779_c0_g1_i15 |
Mononucleotide |
(T)14 |
14 |
5247 |
5260 |
5 |
27851905 |
27854413 |
Primers |
TRINITY_DN14083_c0_g2_i12 |
Dinucleotide |
(AG)6 |
12 |
6148 |
6159 |
4 |
2548716 |
2549727 |
Primers |
TRINITY_DN12207_c0_g1_i11 |
Dinucleotide |
(GA)11 |
22 |
3528 |
3549 |
3 |
7000378 |
7004473 |
Primers |
TRINITY_DN12207_c0_g1_i11 |
Compound |
(A)10cattcttttgaaagagtgttgcaatttgcaattcatacaagacgattgaca(T)12 |
73 |
7511 |
7583 |
3 |
7000378 |
7004473 |
Primers |
TRINITY_DN12981_c0_g5_i8 |
Dinucleotide |
(GA)6 |
12 |
94 |
105 |
6 |
25048370 |
25045313 |
Primers |
TRINITY_DN12981_c0_g5_i8 |
Mononucleotide |
(T)20 |
20 |
6869 |
6888 |
6 |
25048370 |
25045313 |
Primers |
TRINITY_DN12372_c1_g1_i13 |
Dinucleotide |
(AT)6 |
12 |
3203 |
3214 |
2 |
11358277 |
11364133 |
Primers |
TRINITY_DN12372_c1_g1_i13 |
Mononucleotide |
(A)10 |
10 |
4866 |
4875 |
2 |
11358277 |
11364133 |
Primers |
TRINITY_DN12372_c1_g1_i13 |
Mononucleotide |
(T)10 |
10 |
7319 |
7328 |
2 |
11358277 |
11364133 |
Primers |
TRINITY_DN14392_c3_g1_i58 |
Dinucleotide |
(TC)6 |
12 |
23 |
34 |
6 |
28465642 |
28464361 |
Primers |
TRINITY_DN14392_c3_g1_i58 |
Mononucleotide |
(T)11 |
11 |
535 |
545 |
6 |
28465642 |
28464361 |
Primers |
TRINITY_DN14392_c3_g1_i58 |
Trinucleotide |
(TAA)5 |
15 |
7143 |
7157 |
6 |
28465642 |
28464361 |
Primers |
TRINITY_DN14332_c1_g3_i17 |
Mononucleotide |
(T)10 |
10 |
734 |
743 |
3 |
30335142 |
30333394 |
Primers |
TRINITY_DN14332_c1_g3_i17 |
Mononucleotide |
(A)23 |
23 |
4484 |
4506 |
3 |
30335142 |
30333394 |
Primers |
TRINITY_DN14332_c1_g3_i17 |
Mononucleotide |
(A)11 |
11 |
4883 |
4893 |
3 |
30335142 |
30333394 |
Primers |
TRINITY_DN14663_c5_g1_i8 |
Mononucleotide |
(A)14 |
14 |
74 |
87 |
7 |
17556558 |
17559093 |
Primers |
TRINITY_DN14663_c5_g1_i8 |
Dinucleotide |
(AG)6 |
12 |
3151 |
3162 |
7 |
17556558 |
17559093 |
Primers |
TRINITY_DN14663_c5_g1_i8 |
Mononucleotide |
(T)14 |
14 |
3506 |
3519 |
7 |
17556558 |
17559093 |
Primers |
TRINITY_DN14663_c5_g1_i8 |
Dinucleotide |
(GA)13 |
26 |
7437 |
7462 |
7 |
17556558 |
17559093 |
Primers |
TRINITY_DN13987_c1_g1_i16 |
Dinucleotide |
(AT)6 |
12 |
6662 |
6673 |
4 |
17182132 |
17179837 |
Primers |
TRINITY_DN14023_c0_g2_i18 |
Mononucleotide |
(T)10 |
10 |
7472 |
7481 |
5 |
2818087 |
2815145 |
Primers |
TRINITY_DN13370_c0_g1_i1 |
Dinucleotide |
(AT)9 |
18 |
346 |
363 |
5 |
7473692 |
7478865 |
Primers |
TRINITY_DN13370_c0_g1_i1 |
Mononucleotide |
(A)11 |
11 |
1054 |
1064 |
5 |
7473692 |
7478865 |
Primers |
TRINITY_DN13370_c0_g1_i1 |
Trinucleotide |
(GAA)7 |
21 |
7381 |
7401 |
5 |
7473692 |
7478865 |
Primers |
TRINITY_DN13644_c1_g1_i4 |
Trinucleotide |
(ACC)7 |
21 |
843 |
863 |
1 |
1876835 |
1874555 |
Primers |
TRINITY_DN11258_c1_g2_i4 |
Mononucleotide |
(A)10 |
10 |
213 |
222 |
4 |
19251950 |
19259538 |
Primers |
TRINITY_DN11258_c1_g2_i4 |
Mononucleotide |
(A)16 |
16 |
673 |
688 |
4 |
19251950 |
19259538 |
Primers |
TRINITY_DN11258_c1_g2_i4 |
Mononucleotide |
(A)10 |
10 |
7072 |
7081 |
4 |
19251950 |
19259538 |
Primers |
TRINITY_DN14038_c0_g1_i25 |
Mononucleotide |
(T)10 |
10 |
5370 |
5379 |
1 |
12911019 |
12908444 |
Primers |
TRINITY_DN12388_c0_g1_i2 |
Compound |
(T)22ggtattgtttttccatagcatccgccatccgtttatgctttaccttcaaactggagaataatggatcattcgctccttacctgtt(TG)6 |
119 |
614 |
732 |
6 |
26552277 |
26556634 |
Primers |
TRINITY_DN12388_c0_g1_i2 |
Dinucleotide |
(TC)6 |
12 |
2947 |
2958 |
6 |
26552277 |
26556634 |
Primers |
TRINITY_DN12388_c0_g1_i2 |
Mononucleotide |
(T)10 |
10 |
5297 |
5306 |
6 |
26552277 |
26556634 |
Primers |
TRINITY_DN13628_c1_g1_i11 |
Mononucleotide |
(A)10 |
10 |
807 |
816 |
5 |
25513206 |
25515356 |
Primers |
TRINITY_DN13628_c1_g1_i11 |
Mononucleotide |
(T)11 |
11 |
5938 |
5948 |
5 |
25513206 |
25515356 |
Primers |
TRINITY_DN13308_c1_g3_i23 |
Compound* |
(A)11(AG)6* |
22 |
3054 |
3075 |
7 |
18762900 |
18761342 |
Primers |
TRINITY_DN10970_c0_g1_i10 |
Mononucleotide |
(A)10 |
10 |
151 |
160 |
5 |
21097785 |
21090265 |
Primers |
TRINITY_DN10970_c0_g1_i10 |
Trinucleotide |
(ATT)5 |
15 |
705 |
719 |
5 |
21097785 |
21090265 |
Primers |
TRINITY_DN10970_c0_g1_i10 |
Trinucleotide |
(CTA)5 |
15 |
6904 |
6918 |
5 |
21097785 |
21090265 |
Primers |
TRINITY_DN13107_c1_g1_i12 |
Mononucleotide |
(T)10 |
10 |
3863 |
3872 |
5 |
19305459 |
19303313 |
Primers |
TRINITY_DN13865_c1_g1_i30 |
Mononucleotide |
(A)19 |
19 |
1075 |
1093 |
3 |
6470644 |
6468380 |
Primers |
TRINITY_DN14093_c2_g1_i1 |
Mononucleotide |
(A)10 |
10 |
256 |
265 |
6 |
6381702 |
6378934 |
Primers |
TRINITY_DN14093_c2_g1_i1 |
Trinucleotide |
(GTT)5 |
15 |
2692 |
2706 |
6 |
6381702 |
6378934 |
Primers |
TRINITY_DN14093_c2_g1_i1 |
Hexanucleotide |
(AAGAGA)5 |
30 |
7388 |
7417 |
6 |
6381702 |
6378934 |
Primers |
TRINITY_DN13872_c1_g3_i8 |
Mononucleotide |
(T)12 |
12 |
5457 |
5468 |
3 |
6284509 |
6287325 |
Primers |
TRINITY_DN14270_c1_g1_i10 |
Mononucleotide |
(A)17 |
17 |
6466 |
6482 |
5 |
20091987 |
20099027 |
Primers |
TRINITY_DN14270_c1_g1_i10 |
Trinucleotide |
(AAG)18 |
54 |
6831 |
6884 |
5 |
20091987 |
20099027 |
Primers |
TRINITY_DN14270_c1_g1_i10 |
Mononucleotide |
(A)10 |
10 |
7324 |
7333 |
5 |
20091987 |
20099027 |
Primers |
TRINITY_DN13326_c1_g1_i7 |
Mononucleotide |
(T)12 |
12 |
226 |
237 |
6 |
28538261 |
28532073 |
Primers |
TRINITY_DN13326_c1_g1_i7 |
Dinucleotide |
(AG)6 |
12 |
1690 |
1701 |
6 |
28538261 |
28532073 |
Primers |
TRINITY_DN13326_c1_g1_i7 |
Compound* |
(CTT)7(T)10* |
29 |
2819 |
2847 |
6 |
28538261 |
28532073 |
Primers |
TRINITY_DN12602_c2_g1_i12 |
Dinucleotide |
(TC)8 |
16 |
388 |
403 |
3 |
10511986 |
10513500 |
Primers |
TRINITY_DN12602_c2_g1_i12 |
Mononucleotide |
(A)16 |
16 |
1722 |
1737 |
3 |
10511986 |
10513500 |
Primers |
TRINITY_DN12602_c2_g1_i12 |
Mononucleotide |
(T)10 |
10 |
3419 |
3428 |
3 |
10511986 |
10513500 |
Primers |
TRINITY_DN12106_c1_g2_i11 |
Dinucleotide |
(GA)7 |
14 |
490 |
503 |
6 |
15468588 |
15472351 |
Primers |
TRINITY_DN12106_c1_g2_i11 |
Mononucleotide |
(A)10 |
10 |
2958 |
2967 |
6 |
15468588 |
15472351 |
Primers |
TRINITY_DN12106_c1_g2_i11 |
Mononucleotide |
(A)10 |
10 |
3485 |
3494 |
6 |
15468588 |
15472351 |
Primers |
TRINITY_DN12106_c1_g2_i11 |
Dinucleotide |
(AT)11 |
22 |
3746 |
3767 |
6 |
15468588 |
15472351 |
Primers |
TRINITY_DN13782_c2_g1_i25 |
Mononucleotide |
(T)13 |
13 |
1196 |
1208 |
3 |
39731663 |
39734829 |
Primers |
TRINITY_DN13782_c2_g1_i25 |
Mononucleotide |
(A)10 |
10 |
1640 |
1649 |
3 |
39731663 |
39734829 |
Primers |
TRINITY_DN13782_c2_g1_i25 |
Mononucleotide |
(T)10 |
10 |
2792 |
2801 |
3 |
39731663 |
39734829 |
Primers |
TRINITY_DN11944_c0_g2_i5 |
Mononucleotide |
(A)12 |
12 |
4367 |
4378 |
2 |
2183371 |
2185853 |
Primers |
TRINITY_DN11944_c0_g2_i5 |
Mononucleotide |
(A)11 |
11 |
5414 |
5424 |
2 |
2183371 |
2185853 |
Primers |
TRINITY_DN11787_c2_g1_i19 |
Mononucleotide |
(T)27 |
27 |
654 |
680 |
4 |
21589682 |
21584509 |
Primers |
TRINITY_DN11787_c2_g1_i19 |
Mononucleotide |
(A)10 |
10 |
6979 |
6988 |
4 |
21589682 |
21584509 |
Primers |
TRINITY_DN11787_c2_g1_i19 |
Mononucleotide |
(A)10 |
10 |
7379 |
7388 |
4 |
21589682 |
21584509 |
Primers |
TRINITY_DN13397_c0_g1_i2 |
Trinucleotide |
(TCT)5 |
15 |
326 |
340 |
6 |
15855502 |
15859727 |
Primers |
TRINITY_DN13397_c0_g1_i2 |
Mononucleotide |
(A)13 |
13 |
783 |
795 |
6 |
15855502 |
15859727 |
Primers |
TRINITY_DN13397_c0_g1_i2 |
Mononucleotide |
(A)10 |
10 |
2764 |
2773 |
6 |
15855502 |
15859727 |
Primers |
TRINITY_DN13397_c0_g1_i2 |
Mononucleotide |
(A)10 |
10 |
5774 |
5783 |
6 |
15855502 |
15859727 |
Primers |
TRINITY_DN13073_c1_g1_i9 |
Mononucleotide |
(T)10 |
10 |
1895 |
1904 |
3 |
32400456 |
32393061 |
Primers |
TRINITY_DN13073_c1_g1_i9 |
Mononucleotide |
(A)11 |
11 |
4302 |
4312 |
3 |
32400456 |
32393061 |
Primers |
TRINITY_DN13073_c1_g1_i9 |
Dinucleotide |
(CT)8 |
16 |
4870 |
4885 |
3 |
32400456 |
32393061 |
Primers |
TRINITY_DN14314_c2_g1_i12 |
Compound |
(A)16ggtagaacaaattccctccatatgattggacgccatcaaagctgatccttgcctttcccaccagcccaacggacacactcact(CA)9tacccacacacccccaaaacgctgacggaaccaaattctctctctctaacgcacattcccattta(CT)9 |
200 |
3518 |
3717 |
4 |
20046573 |
20044165 |
Primers |
TRINITY_DN14314_c2_g1_i12 |
Mononucleotide |
(T)11 |
11 |
6290 |
6300 |
4 |
20046573 |
20044165 |
Primers |
TRINITY_DN10899_c3_g1_i16 |
Compound |
(A)10cttttacaatatacaacacaattttaaaatggagtaggaagactttgacgaattttgtattttgttatttatgacatcgtccattttttccc(T)10 |
112 |
3946 |
4057 |
5 |
21732667 |
21740060 |
Primers |
TRINITY_DN10899_c3_g1_i16 |
Mononucleotide |
(A)10 |
10 |
4280 |
4289 |
5 |
21732667 |
21740060 |
Primers |
TRINITY_DN13376_c3_g1_i10 |
Mononucleotide |
(A)10 |
10 |
2386 |
2395 |
5 |
18626951 |
18625524 |
Primers |
TRINITY_DN13376_c3_g1_i10 |
Mononucleotide |
(T)11 |
11 |
3879 |
3889 |
5 |
18626951 |
18625524 |
Primers |
TRINITY_DN13376_c3_g1_i10 |
Mononucleotide |
(A)16 |
16 |
6373 |
6388 |
5 |
18626951 |
18625524 |
Primers |
TRINITY_DN13782_c2_g2_i20 |
Mononucleotide |
(A)10 |
10 |
871 |
880 |
6 |
18944901 |
18940983 |
Primers |
TRINITY_DN14201_c0_g1_i36 |
Mononucleotide |
(T)12 |
12 |
751 |
762 |
4 |
23014018 |
23016095 |
Primers |
TRINITY_DN13088_c0_g1_i19 |
Compound |
(CAT)6ccttcattcggccctctacgctataacgcagtttacccttccatctccaaacacccatattactgtatttcctctatt(A)16 |
112 |
1793 |
1904 |
5 |
27983975 |
27978214 |
Primers |
TRINITY_DN13088_c0_g1_i19 |
Trinucleotide |
(TCT)5 |
15 |
2291 |
2305 |
5 |
27983975 |
27978214 |
Primers |
TRINITY_DN13088_c0_g1_i19 |
Compound |
(T)16acaaaaagcaaaaatttcatcggtatatggaaaggaagaaaaaaatcaaagataaactcgcctc(GA)6 |
92 |
5222 |
5313 |
5 |
27983975 |
27978214 |
Primers |
TRINITY_DN12865_c2_g1_i18 |
Mononucleotide |
(A)21 |
21 |
361 |
381 |
5 |
21411518 |
21409228 |
Primers |
TRINITY_DN12865_c2_g1_i18 |
Dinucleotide |
(AT)11 |
22 |
1015 |
1036 |
5 |
21411518 |
21409228 |
Primers |
TRINITY_DN12865_c2_g1_i18 |
Tetranucleotide |
(AAGA)5 |
20 |
6348 |
6367 |
5 |
21411518 |
21409228 |
Primers |
TRINITY_DN14396_c2_g1_i25 |
Trinucleotide |
(AAT)6 |
18 |
1299 |
1316 |
1 |
27364439 |
27362727 |
Primers |
TRINITY_DN14396_c2_g1_i25 |
Dinucleotide |
(TA)12 |
24 |
5631 |
5654 |
1 |
27364439 |
27362727 |
Primers |
TRINITY_DN14719_c2_g2_i6 |
Trinucleotide |
(TTC)5 |
15 |
3987 |
4001 |
5 |
15783889 |
15781992 |
Primers |
TRINITY_DN14719_c2_g2_i6 |
Compound |
(T)16gaaacggaaacaagcctcttcattgatataatgagtaagactaaagctcgaagtacaaagaaacgaaatgaaatacatctaaacaaaaacgg(A)10 |
118 |
6449 |
6566 |
5 |
15783889 |
15781992 |
Primers |
TRINITY_DN14719_c2_g2_i6 |
Mononucleotide |
(T)22 |
22 |
7307 |
7328 |
5 |
15783889 |
15781992 |
Primers |
TRINITY_DN12577_c0_g2_i10 |
Mononucleotide |
(T)11 |
11 |
421 |
431 |
2 |
17135302 |
17142649 |
Primers |
TRINITY_DN13879_c2_g2_i25 |
Compound |
(A)38gaaagaaagaaaaaaaagaaagaaagaaaagaaagaa(AT)7 |
89 |
3598 |
3686 |
5 |
21636916 |
21632166 |
Primers |
TRINITY_DN13879_c2_g2_i25 |
Compound |
(A)10tcataagctgctattgaaattccgcctcgttcag(T)11 |
55 |
6791 |
6845 |
5 |
21636916 |
21632166 |
Primers |
TRINITY_DN13879_c2_g2_i25 |
Mononucleotide |
(A)14 |
14 |
7251 |
7264 |
5 |
21636916 |
21632166 |
Primers |
TRINITY_DN9746_c0_g1_i8 |
Mononucleotide |
(A)11 |
11 |
1844 |
1854 |
3 |
29358049 |
29365109 |
Primers |
TRINITY_DN9746_c0_g1_i8 |
Mononucleotide |
(A)10 |
10 |
4413 |
4422 |
3 |
29358049 |
29365109 |
Primers |
TRINITY_DN13822_c2_g1_i8 |
Mononucleotide |
(A)10 |
10 |
2021 |
2030 |
5 |
25126493 |
25123547 |
Primers |
TRINITY_DN13822_c2_g1_i8 |
Mononucleotide |
(T)12 |
12 |
2459 |
2470 |
5 |
25126493 |
25123547 |
Primers |
TRINITY_DN13788_c1_g1_i17 |
Dinucleotide |
(TC)11 |
22 |
280 |
301 |
2 |
12310035 |
12311996 |
Primers |
TRINITY_DN13788_c1_g1_i17 |
Dinucleotide |
(GT)6 |
12 |
482 |
493 |
2 |
12310035 |
12311996 |
Primers |
TRINITY_DN13788_c1_g1_i17 |
Tetranucleotide |
(ATAG)5 |
20 |
4679 |
4698 |
2 |
12310035 |
12311996 |
Primers |
TRINITY_DN13788_c1_g1_i17 |
Dinucleotide |
(AG)6 |
12 |
7298 |
7309 |
2 |
12310035 |
12311996 |
Primers |
TRINITY_DN12824_c0_g9_i1 |
Mononucleotide |
(T)10 |
10 |
2742 |
2751 |
4 |
5992102 |
5986614 |
Primers |
TRINITY_DN14265_c2_g1_i6 |
Mononucleotide |
(A)11 |
11 |
4388 |
4398 |
6 |
27496993 |
27490949 |
Primers |
TRINITY_DN14281_c3_g2_i7 |
Trinucleotide |
(GAA)8 |
24 |
7201 |
7224 |
6 |
223116 |
220831 |
Primers |
TRINITY_DN12212_c1_g2_i2 |
Dinucleotide |
(AT)11 |
22 |
36 |
57 |
4 |
4950700 |
4945348 |
Primers |
TRINITY_DN12212_c1_g2_i2 |
Mononucleotide |
(A)11 |
11 |
476 |
486 |
4 |
4950700 |
4945348 |
Primers |
TRINITY_DN12212_c1_g2_i2 |
Mononucleotide |
(A)10 |
10 |
5990 |
5999 |
4 |
4950700 |
4945348 |
Primers |
TRINITY_DN14573_c0_g1_i30 |
Mononucleotide |
(T)10 |
10 |
5874 |
5883 |
5 |
9270767 |
9269655 |
Primers |
TRINITY_DN13445_c0_g1_i10 |
Mononucleotide |
(T)10 |
10 |
212 |
221 |
7 |
15861312 |
15859665 |
Primers |
TRINITY_DN13445_c0_g1_i10 |
Mononucleotide |
(A)11 |
11 |
4607 |
4617 |
7 |
15861312 |
15859665 |
Primers |
TRINITY_DN13745_c0_g1_i9 |
Mononucleotide |
(T)11 |
11 |
36 |
46 |
6 |
26631351 |
26627663 |
Primers |
TRINITY_DN14620_c5_g1_i7 |
Mononucleotide |
(T)38 |
38 |
1 |
38 |
4 |
22197554 |
22195114 |
Primers |
TRINITY_DN14620_c5_g1_i7 |
Mononucleotide |
(T)12 |
12 |
2631 |
2642 |
4 |
22197554 |
22195114 |
Primers |
TRINITY_DN14620_c5_g1_i7 |
Mononucleotide |
(A)22 |
22 |
3084 |
3105 |
4 |
22197554 |
22195114 |
Primers |
TRINITY_DN14620_c5_g1_i7 |
Dinucleotide |
(TG)8 |
16 |
5519 |
5534 |
4 |
22197554 |
22195114 |
Primers |
TRINITY_DN14620_c5_g1_i7 |
Trinucleotide |
(TCT)6 |
18 |
6723 |
6740 |
4 |
22197554 |
22195114 |
Primers |
TRINITY_DN14620_c5_g1_i7 |
Dinucleotide |
(AG)14 |
28 |
7275 |
7302 |
4 |
22197554 |
22195114 |
Primers |
TRINITY_DN12406_c0_g1_i3 |
Dinucleotide |
(TC)6 |
12 |
3359 |
3370 |
6 |
3634122 |
3631776 |
Primers |
TRINITY_DN12406_c0_g1_i3 |
Dinucleotide |
(TG)7 |
14 |
4665 |
4678 |
6 |
3634122 |
3631776 |
Primers |
TRINITY_DN12406_c0_g1_i3 |
Trinucleotide |
(AAG)6 |
18 |
6145 |
6162 |
6 |
3634122 |
3631776 |
Primers |
TRINITY_DN14026_c0_g1_i2 |
Mononucleotide |
(T)11 |
11 |
337 |
347 |
5 |
24773906 |
24769849 |
Primers |
TRINITY_DN14025_c0_g2_i1 |
Mononucleotide |
(A)19 |
19 |
2297 |
2315 |
4 |
22792648 |
22790215 |
Primers |
TRINITY_DN14025_c0_g2_i1 |
Trinucleotide |
(AAT)8 |
24 |
5315 |
5338 |
4 |
22792648 |
22790215 |
Primers |
TRINITY_DN12823_c4_g1_i29 |
Mononucleotide |
(T)10 |
10 |
270 |
279 |
6 |
1761715 |
1758538 |
Primers |
TRINITY_DN12823_c4_g1_i29 |
Compound |
(T)10attaattaattttgtgaattttctatttttctctt(A)10 |
55 |
417 |
471 |
6 |
1761715 |
1758538 |
Primers |
TRINITY_DN12823_c4_g1_i29 |
Mononucleotide |
(T)12 |
12 |
6257 |
6268 |
6 |
1761715 |
1758538 |
Primers |
TRINITY_DN13932_c1_g1_i20 |
Dinucleotide |
(TC)7 |
14 |
6521 |
6534 |
3 |
35809013 |
35815723 |
Primers |
TRINITY_DN14190_c0_g3_i6 |
Trinucleotide |
(TTC)7 |
21 |
7182 |
7202 |
4 |
10791278 |
10788844 |
Primers |
TRINITY_DN13910_c3_g3_i13 |
Mononucleotide |
(A)11 |
11 |
6778 |
6788 |
6 |
20192034 |
20189472 |
Primers |
TRINITY_DN14349_c0_g2_i14 |
Dinucleotide |
(AG)6 |
12 |
7240 |
7251 |
6 |
2387295 |
2382199 |
Primers |
TRINITY_DN14382_c1_g1_i15 |
Dinucleotide |
(CT)9 |
18 |
1027 |
1044 |
4 |
12758825 |
12763264 |
Primers |
TRINITY_DN13634_c1_g1_i6 |
Mononucleotide |
(T)10 |
10 |
1843 |
1852 |
7 |
2968699 |
2966784 |
Primers |
TRINITY_DN13634_c1_g1_i6 |
Mononucleotide |
(A)12 |
12 |
3370 |
3381 |
7 |
2968699 |
2966784 |
Primers |
TRINITY_DN13634_c1_g1_i6 |
Mononucleotide |
(T)10 |
10 |
7168 |
7177 |
7 |
2968699 |
2966784 |
Primers |
TRINITY_DN14272_c1_g1_i20 |
Mononucleotide |
(T)10 |
10 |
547 |
556 |
6 |
20487317 |
20488555 |
Primers |
TRINITY_DN14272_c1_g1_i20 |
Compound |
(GGC)5tgagatgcgccaggtggcaacgtgaacaacagatttaggaggaaga(AAG)5 |
76 |
7020 |
7095 |
6 |
20487317 |
20488555 |
Primers |
TRINITY_DN14272_c1_g1_i20 |
Mononucleotide |
(T)10 |
10 |
7210 |
7219 |
6 |
20487317 |
20488555 |
Primers |
TRINITY_DN14620_c5_g2_i17 |
Mononucleotide |
(T)14 |
14 |
146 |
159 |
1 |
415539 |
408351 |
Primers |
TRINITY_DN14620_c5_g2_i17 |
Dinucleotide |
(TG)6 |
12 |
1247 |
1258 |
1 |
415539 |
408351 |
Primers |
TRINITY_DN14620_c5_g2_i17 |
Mononucleotide |
(A)12 |
12 |
6880 |
6891 |
1 |
415539 |
408351 |
Primers |
TRINITY_DN14620_c5_g2_i17 |
Dinucleotide |
(AG)7 |
14 |
7122 |
7135 |
1 |
415539 |
408351 |
Primers |
TRINITY_DN11653_c2_g1_i18 |
Dinucleotide |
(AG)6 |
12 |
235 |
246 |
3 |
11421523 |
11425942 |
Primers |
TRINITY_DN11653_c2_g1_i18 |
Dinucleotide |
(TC)9 |
18 |
1523 |
1540 |
3 |
11421523 |
11425942 |
Primers |
TRINITY_DN11653_c2_g1_i18 |
Compound |
(T)11aaaaaataagaaacatatcagaatgatgtaacgaattaagcacattacaaaagaaatttccaatcgaaaactaaacgtgattaaagggtgc(T)13 |
115 |
5929 |
6043 |
3 |
11421523 |
11425942 |
Primers |
TRINITY_DN11653_c2_g1_i18 |
Compound |
(GAA)5gacgtaggagcatcaatgacaaggaaagggaaaaataaagaagat(GAA)5 |
75 |
7056 |
7130 |
3 |
11421523 |
11425942 |
Primers |
TRINITY_DN11768_c0_g1_i6 |
Dinucleotide |
(CT)6 |
12 |
6586 |
6597 |
6 |
16970260 |
16964528 |
Primers |
TRINITY_DN13125_c1_g2_i4 |
Trinucleotide |
(AAT)10 |
30 |
1682 |
1711 |
1 |
8029139 |
8031822 |
Primers |
TRINITY_DN13125_c1_g2_i4 |
Mononucleotide |
(A)24 |
24 |
2078 |
2101 |
1 |
8029139 |
8031822 |
Primers |
TRINITY_DN11869_c2_g2_i14 |
Dinucleotide |
(AT)6 |
12 |
280 |
291 |
1 |
3980651 |
3982753 |
Primers |
TRINITY_DN11869_c2_g2_i14 |
Mononucleotide |
(A)12 |
12 |
2385 |
2396 |
1 |
3980651 |
3982753 |
Primers |
TRINITY_DN11869_c2_g2_i14 |
Dinucleotide |
(TA)7 |
14 |
2841 |
2854 |
1 |
3980651 |
3982753 |
Primers |
TRINITY_DN11869_c2_g2_i14 |
Mononucleotide |
(A)13 |
13 |
6288 |
6300 |
1 |
3980651 |
3982753 |
Primers |
TRINITY_DN11468_c4_g1_i8 |
Mononucleotide |
(T)11 |
11 |
27 |
37 |
3 |
38458871 |
38457001 |
Primers |
TRINITY_DN11468_c4_g1_i8 |
Trinucleotide |
(TCT)5 |
15 |
701 |
715 |
3 |
38458871 |
38457001 |
Primers |
TRINITY_DN11468_c4_g1_i8 |
Dinucleotide |
(TG)7 |
14 |
4207 |
4220 |
3 |
38458871 |
38457001 |
Primers |
TRINITY_DN11673_c1_g6_i8 |
Mononucleotide |
(T)10 |
10 |
161 |
170 |
6 |
9555866 |
9560201 |
Primers |
TRINITY_DN11673_c1_g6_i8 |
Mononucleotide |
(A)11 |
11 |
5644 |
5654 |
6 |
9555866 |
9560201 |
Primers |
TRINITY_DN11673_c1_g6_i8 |
Mononucleotide |
(A)16 |
16 |
6989 |
7004 |
6 |
9555866 |
9560201 |
Primers |
TRINITY_DN12790_c0_g2_i18 |
Mononucleotide |
(A)10 |
10 |
1025 |
1034 |
1 |
7481999 |
7477755 |
Primers |
TRINITY_DN12790_c0_g2_i18 |
Mononucleotide |
(A)27 |
27 |
1543 |
1569 |
1 |
7481999 |
7477755 |
Primers |
TRINITY_DN12790_c0_g2_i18 |
Mononucleotide |
(A)11 |
11 |
3515 |
3525 |
1 |
7481999 |
7477755 |
Primers |
TRINITY_DN12790_c0_g2_i18 |
Mononucleotide |
(A)11 |
11 |
3871 |
3881 |
1 |
7481999 |
7477755 |
Primers |
TRINITY_DN12790_c0_g2_i18 |
Mononucleotide |
(T)12 |
12 |
7068 |
7079 |
1 |
7481999 |
7477755 |
Primers |
TRINITY_DN14331_c3_g1_i12 |
Dinucleotide |
(CT)6 |
12 |
139 |
150 |
4 |
6107011 |
6108247 |
Primers |
TRINITY_DN13654_c0_g1_i7 |
Compound |
(GA)13aagaa(AG)8 |
47 |
1135 |
1181 |
7 |
1702207 |
1705179 |
Primers |
TRINITY_DN13654_c0_g1_i7 |
Dinucleotide |
(GA)15 |
30 |
7086 |
7115 |
7 |
1702207 |
1705179 |
Primers |
TRINITY_DN14420_c2_g2_i17 |
Dinucleotide |
(GA)7 |
14 |
66 |
79 |
2 |
9731283 |
9727816 |
Primers |
TRINITY_DN14420_c2_g2_i17 |
Mononucleotide |
(T)11 |
11 |
3368 |
3378 |
2 |
9731283 |
9727816 |
Primers |
TRINITY_DN14420_c2_g2_i17 |
Dinucleotide |
(GA)16 |
32 |
7133 |
7164 |
2 |
9731283 |
9727816 |
Primers |
TRINITY_DN13524_c0_g5_i1 |
Hexanucleotide |
(CCTTTC)5 |
30 |
130 |
159 |
5 |
11156618 |
11159260 |
Primers |
TRINITY_DN14533_c2_g1_i4 |
Mononucleotide |
(T)11 |
11 |
2138 |
2148 |
2 |
3499012 |
3506031 |
Primers |
TRINITY_DN13450_c1_g1_i4 |
Mononucleotide |
(T)12 |
12 |
440 |
451 |
6 |
27307624 |
27314240 |
Primers |
TRINITY_DN13450_c1_g1_i4 |
Dinucleotide |
(AG)14 |
28 |
1531 |
1558 |
6 |
27307624 |
27314240 |
Primers |
TRINITY_DN12383_c0_g1_i2 |
Trinucleotide |
(CAG)5 |
15 |
4302 |
4316 |
6 |
11819664 |
11817510 |
Primers |
TRINITY_DN13979_c2_g2_i12 |
Dinucleotide |
(AT)7 |
14 |
2666 |
2679 |
5 |
24667780 |
24664752 |
Primers |
TRINITY_DN13840_c1_g1_i16 |
Trinucleotide |
(TTA)5 |
15 |
5373 |
5387 |
3 |
25971179 |
25973228 |
Primers |
TRINITY_DN12620_c0_g1_i4 |
Mononucleotide |
(T)10 |
10 |
4256 |
4265 |
2 |
12638912 |
12641187 |
Primers |
TRINITY_DN13120_c1_g1_i27 |
Mononucleotide |
(A)13 |
13 |
2092 |
2104 |
1 |
22571755 |
22568109 |
Primers |
TRINITY_DN13120_c1_g1_i27 |
Mononucleotide |
(T)26 |
26 |
3700 |
3725 |
1 |
22571755 |
22568109 |
Primers |
TRINITY_DN13120_c1_g1_i27 |
Mononucleotide |
(A)13 |
13 |
4009 |
4021 |
1 |
22571755 |
22568109 |
Primers |
TRINITY_DN13805_c0_g2_i10 |
Mononucleotide |
(A)14 |
14 |
83 |
96 |
3 |
31971315 |
31970203 |
Primers |
TRINITY_DN13805_c0_g2_i10 |
Mononucleotide |
(A)11 |
11 |
4359 |
4369 |
3 |
31971315 |
31970203 |
Primers |
TRINITY_DN13805_c0_g2_i10 |
Trinucleotide |
(AGA)7 |
21 |
6707 |
6727 |
3 |
31971315 |
31970203 |
Primers |
TRINITY_DN13997_c2_g2_i21 |
Dinucleotide |
(AG)10 |
20 |
2118 |
2137 |
4 |
20601601 |
20605109 |
Primers |
TRINITY_DN13997_c2_g2_i21 |
Mononucleotide |
(T)12 |
12 |
2542 |
2553 |
4 |
20601601 |
20605109 |
Primers |
TRINITY_DN13997_c2_g2_i21 |
Mononucleotide |
(A)14 |
14 |
4433 |
4446 |
4 |
20601601 |
20605109 |
Primers |
TRINITY_DN13306_c2_g1_i18 |
Mononucleotide |
(T)14 |
14 |
241 |
254 |
1 |
26774313 |
26771598 |
Primers |
TRINITY_DN13306_c2_g1_i18 |
Mononucleotide |
(A)13 |
13 |
1499 |
1511 |
1 |
26774313 |
26771598 |
Primers |
TRINITY_DN13306_c2_g1_i18 |
Mononucleotide |
(A)11 |
11 |
3565 |
3575 |
1 |
26774313 |
26771598 |
Primers |
TRINITY_DN13197_c0_g2_i20 |
Dinucleotide |
(TA)7 |
14 |
71 |
84 |
1 |
2837344 |
2840263 |
Primers |
TRINITY_DN13197_c0_g2_i20 |
Dinucleotide |
(TC)7 |
14 |
308 |
321 |
1 |
2837344 |
2840263 |
Primers |
TRINITY_DN13214_c0_g1_i18 |
Compound* |
(CA)6(A)10* |
21 |
3999 |
4019 |
2 |
9022008 |
9018996 |
Primers |
TRINITY_DN13214_c0_g1_i18 |
Mononucleotide |
(T)10 |
10 |
4993 |
5002 |
2 |
9022008 |
9018996 |
Primers |
TRINITY_DN13214_c0_g1_i18 |
Mononucleotide |
(A)11 |
11 |
6533 |
6543 |
2 |
9022008 |
9018996 |
Primers |
TRINITY_DN12626_c0_g2_i28 |
Dinucleotide |
(TC)8 |
16 |
25 |
40 |
2 |
19217505 |
19219491 |
Primers |
TRINITY_DN12806_c0_g1_i12 |
Mononucleotide |
(A)10 |
10 |
3270 |
3279 |
3 |
43029 |
41196 |
Primers |
TRINITY_DN13136_c1_g4_i16 |
Mononucleotide |
(T)19 |
19 |
64 |
82 |
3 |
16783653 |
16786670 |
Primers |
TRINITY_DN13136_c1_g4_i16 |
Mononucleotide |
(T)11 |
11 |
5587 |
5597 |
3 |
16783653 |
16786670 |
Primers |
TRINITY_DN13343_c1_g3_i6 |
Mononucleotide |
(A)11 |
11 |
6473 |
6483 |
3 |
37089607 |
37084160 |
Primers |
TRINITY_DN12824_c0_g1_i22 |
Mononucleotide |
(T)57 |
57 |
2609 |
2665 |
5 |
2356768 |
2360120 |
Primers |
TRINITY_DN14210_c0_g3_i10 |
Dinucleotide |
(CT)10 |
20 |
148 |
167 |
4 |
5150008 |
5153662 |
Primers |
TRINITY_DN14210_c0_g3_i10 |
Mononucleotide |
(T)10 |
10 |
697 |
706 |
4 |
5150008 |
5153662 |
Primers |
TRINITY_DN14210_c0_g3_i10 |
Dinucleotide |
(GA)6 |
12 |
4840 |
4851 |
4 |
5150008 |
5153662 |
Primers |
TRINITY_DN13443_c1_g2_i6 |
Compound |
(CTT)6tttca(T)10 |
33 |
89 |
121 |
7 |
1628946 |
1625226 |
Primers |
TRINITY_DN13443_c1_g2_i6 |
Dinucleotide |
(CT)11 |
22 |
1991 |
2012 |
7 |
1628946 |
1625226 |
Primers |
TRINITY_DN13394_c3_g2_i3 |
Dinucleotide |
(AT)9 |
18 |
1247 |
1264 |
1 |
2806806 |
2809342 |
Primers |
TRINITY_DN13394_c3_g2_i3 |
Mononucleotide |
(T)10 |
10 |
4187 |
4196 |
1 |
2806806 |
2809342 |
Primers |
TRINITY_DN13394_c3_g2_i3 |
Mononucleotide |
(T)10 |
10 |
6309 |
6318 |
1 |
2806806 |
2809342 |
Primers |
TRINITY_DN13394_c3_g2_i3 |
Dinucleotide |
(AC)6 |
12 |
6955 |
6966 |
1 |
2806806 |
2809342 |
Primers |
TRINITY_DN13400_c0_g1_i22 |
Mononucleotide |
(A)10 |
10 |
5553 |
5562 |
1 |
22511141 |
22514104 |
Primers |
TRINITY_DN13400_c0_g1_i22 |
Mononucleotide |
(A)12 |
12 |
6769 |
6780 |
1 |
22511141 |
22514104 |
Primers |
TRINITY_DN13400_c0_g1_i22 |
Compound |
(TC)10tt(TC)6 |
34 |
6969 |
7002 |
1 |
22511141 |
22514104 |
Primers |
TRINITY_DN13125_c1_g1_i2 |
Mononucleotide |
(A)10 |
10 |
173 |
182 |
6 |
17071905 |
17069170 |
Primers |
TRINITY_DN14500_c1_g2_i13 |
Dinucleotide |
(GT)7 |
14 |
652 |
665 |
4 |
23206806 |
23203910 |
Primers |
TRINITY_DN14500_c1_g2_i13 |
Pentanucleotide |
(TTCTA)5 |
25 |
1231 |
1255 |
4 |
23206806 |
23203910 |
Primers |
TRINITY_DN14500_c1_g2_i13 |
Dinucleotide |
(GA)10 |
20 |
6827 |
6846 |
4 |
23206806 |
23203910 |
Primers |
TRINITY_DN14375_c0_g1_i17 |
Compound |
(T)14gtttctgttatcttgttcccgtgtgtttttgtg(T)13 |
60 |
3270 |
3329 |
2 |
2934735 |
2933253 |
Primers |
TRINITY_DN12694_c1_g3_i6 |
Mononucleotide |
(T)11 |
11 |
321 |
331 |
2 |
12927112 |
12927380 |
Primers |
TRINITY_DN12694_c1_g3_i6 |
Mononucleotide |
(A)13 |
13 |
939 |
951 |
2 |
12927112 |
12927380 |
Primers |
TRINITY_DN12694_c1_g3_i6 |
Mononucleotide |
(A)15 |
15 |
2110 |
2124 |
2 |
12927112 |
12927380 |
Primers |
TRINITY_DN12694_c1_g3_i6 |
Mononucleotide |
(A)14 |
14 |
3974 |
3987 |
2 |
12927112 |
12927380 |
Primers |
TRINITY_DN12694_c1_g3_i6 |
Mononucleotide |
(T)39 |
39 |
6993 |
7031 |
2 |
12927112 |
12927380 |
Primers |
TRINITY_DN12248_c1_g3_i7 |
Mononucleotide |
(T)23 |
23 |
37 |
59 |
3 |
3067855 |
3064365 |
Primers |
TRINITY_DN12248_c1_g3_i7 |
Trinucleotide |
(TAG)5 |
15 |
1266 |
1280 |
3 |
3067855 |
3064365 |
Primers |
TRINITY_DN11822_c0_g3_i7 |
Mononucleotide |
(T)10 |
10 |
138 |
147 |
6 |
26394152 |
26401157 |
Primers |
TRINITY_DN14089_c1_g1_i16 |
Mononucleotide |
(T)19 |
19 |
432 |
450 |
7 |
5147966 |
5144562 |
Primers |
TRINITY_DN14089_c1_g1_i16 |
Trinucleotide |
(TGA)5 |
15 |
6850 |
6864 |
7 |
5147966 |
5144562 |
Primers |
TRINITY_DN13718_c2_g1_i12 |
Trinucleotide |
(GAA)6 |
18 |
6986 |
7003 |
1 |
12467538 |
12465879 |
Primers |
TRINITY_DN13610_c2_g1_i10 |
Mononucleotide |
(T)10 |
10 |
5817 |
5826 |
7 |
7652405 |
7649700 |
Primers |
TRINITY_DN13095_c2_g3_i10 |
Mononucleotide |
(A)15 |
15 |
6693 |
6707 |
6 |
14646357 |
14651615 |
Primers |
TRINITY_DN12744_c0_g2_i10 |
Compound |
(T)10ccattctgtttttctttttcttctttttccattttttttattgctttagggtttatctttatcttcttttgttttttg(T)17 |
105 |
582 |
686 |
1 |
11664243 |
11661228 |
Primers |
TRINITY_DN12642_c1_g2_i4 |
Tetranucleotide |
(AGAT)5 |
20 |
206 |
225 |
4 |
4610745 |
4607136 |
Primers |
TRINITY_DN12642_c1_g2_i4 |
Mononucleotide |
(A)10 |
10 |
4968 |
4977 |
4 |
4610745 |
4607136 |
Primers |
TRINITY_DN12031_c1_g3_i4 |
Compound |
(TTC)6tttttttcc(T)12 |
39 |
7 |
45 |
3 |
916484 |
920356 |
Primers |
TRINITY_DN12031_c1_g3_i4 |
Mononucleotide |
(T)13 |
13 |
3309 |
3321 |
3 |
916484 |
920356 |
Primers |
TRINITY_DN12031_c1_g3_i4 |
Dinucleotide |
(CA)6 |
12 |
5050 |
5061 |
3 |
916484 |
920356 |
Primers |
TRINITY_DN12031_c1_g3_i4 |
Mononucleotide |
(T)10 |
10 |
6424 |
6433 |
3 |
916484 |
920356 |
Primers |
TRINITY_DN11210_c0_g1_i18 |
Trinucleotide |
(TTC)6 |
18 |
3446 |
3463 |
3 |
1957217 |
1960642 |
Primers |
TRINITY_DN11210_c0_g1_i18 |
Mononucleotide |
(A)11 |
11 |
4826 |
4836 |
3 |
1957217 |
1960642 |
Primers |
TRINITY_DN10288_c0_g1_i2 |
Mononucleotide |
(A)10 |
10 |
3859 |
3868 |
1 |
4854078 |
4857547 |
Primers |
TRINITY_DN10288_c0_g1_i2 |
Mononucleotide |
(A)12 |
12 |
6937 |
6948 |
1 |
4854078 |
4857547 |
Primers |
TRINITY_DN11688_c0_g2_i11 |
Dinucleotide |
(AG)7 |
14 |
16 |
29 |
6 |
20811301 |
20815825 |
Primers |
TRINITY_DN11688_c0_g2_i11 |
Hexanucleotide |
(CTCTTT)5 |
30 |
249 |
278 |
6 |
20811301 |
20815825 |
Primers |
TRINITY_DN11688_c0_g2_i11 |
Mononucleotide |
(T)11 |
11 |
6536 |
6546 |
6 |
20811301 |
20815825 |
Primers |
TRINITY_DN11401_c2_g3_i2 |
Mononucleotide |
(T)11 |
11 |
4047 |
4057 |
4 |
19829212 |
19831428 |
Primers |
TRINITY_DN11401_c2_g3_i2 |
Mononucleotide |
(T)12 |
12 |
4369 |
4380 |
4 |
19829212 |
19831428 |
Primers |
TRINITY_DN11401_c2_g3_i2 |
Mononucleotide |
(T)10 |
10 |
6918 |
6927 |
4 |
19829212 |
19831428 |
Primers |
TRINITY_DN13051_c2_g1_i16 |
Mononucleotide |
(T)10 |
10 |
167 |
176 |
4 |
10680598 |
10677267 |
Primers |
TRINITY_DN13975_c1_g1_i13 |
Compound |
(A)10cagagatttttttttgttttttg(T)13 |
46 |
6677 |
6722 |
1 |
21710741 |
21715200 |
Primers |
TRINITY_DN13357_c0_g3_i5 |
Trinucleotide |
(AAG)9 |
27 |
6941 |
6967 |
6 |
16653051 |
16647263 |
Primers |
TRINITY_DN12202_c0_g1_i7 |
Mononucleotide |
(T)10 |
10 |
281 |
290 |
2 |
7915904 |
7919058 |
Primers |
TRINITY_DN13663_c2_g2_i14 |
Trinucleotide |
(TTA)5 |
15 |
181 |
195 |
2 |
16188070 |
16190594 |
Primers |
TRINITY_DN13663_c2_g2_i14 |
Mononucleotide |
(T)27 |
27 |
657 |
683 |
2 |
16188070 |
16190594 |
Primers |
TRINITY_DN12991_c2_g5_i4 |
Dinucleotide |
(TA)6 |
12 |
220 |
231 |
5 |
24788291 |
24781338 |
Primers |
TRINITY_DN12991_c2_g5_i4 |
Mononucleotide |
(A)11 |
11 |
755 |
765 |
5 |
24788291 |
24781338 |
Primers |
TRINITY_DN12991_c2_g5_i4 |
Dinucleotide |
(CT)7 |
14 |
1397 |
1410 |
5 |
24788291 |
24781338 |
Primers |
TRINITY_DN12991_c2_g5_i4 |
Mononucleotide |
(A)10 |
10 |
1986 |
1995 |
5 |
24788291 |
24781338 |
Primers |
TRINITY_DN12991_c2_g5_i4 |
Mononucleotide |
(A)12 |
12 |
2908 |
2919 |
5 |
24788291 |
24781338 |
Primers |
TRINITY_DN12991_c2_g5_i4 |
Mononucleotide |
(T)12 |
12 |
3445 |
3456 |
5 |
24788291 |
24781338 |
Primers |
TRINITY_DN12991_c2_g5_i4 |
Trinucleotide |
(AGA)5 |
15 |
6721 |
6735 |
5 |
24788291 |
24781338 |
Primers |
TRINITY_DN13471_c0_g1_i2 |
Trinucleotide |
(TAA)6 |
18 |
3161 |
3178 |
4 |
2475126 |
2482064 |
Primers |
TRINITY_DN13471_c0_g1_i2 |
Mononucleotide |
(A)16 |
16 |
3490 |
3505 |
4 |
2475126 |
2482064 |
Primers |
TRINITY_DN13471_c0_g1_i2 |
Mononucleotide |
(A)11 |
11 |
4331 |
4341 |
4 |
2475126 |
2482064 |
Primers |
TRINITY_DN12551_c0_g1_i8 |
Compound |
(TC)12aggtttctctctcctctctcctctctcctctctcctctctgtctctg(TC)6 |
83 |
1 |
83 |
5 |
2695813 |
2690339 |
Primers |
TRINITY_DN12551_c0_g1_i8 |
Mononucleotide |
(T)10 |
10 |
502 |
511 |
5 |
2695813 |
2690339 |
Primers |
TRINITY_DN12551_c0_g1_i8 |
Mononucleotide |
(T)11 |
11 |
740 |
750 |
5 |
2695813 |
2690339 |
Primers |
TRINITY_DN12551_c0_g1_i8 |
Mononucleotide |
(A)12 |
12 |
4314 |
4325 |
5 |
2695813 |
2690339 |
Primers |
TRINITY_DN13922_c2_g1_i3 |
Dinucleotide |
(TA)6 |
12 |
276 |
287 |
3 |
20664601 |
20668213 |
Primers |
TRINITY_DN13922_c2_g1_i3 |
Dinucleotide |
(AT)6 |
12 |
5018 |
5029 |
3 |
20664601 |
20668213 |
Primers |
TRINITY_DN13922_c2_g1_i3 |
Mononucleotide |
(A)14 |
14 |
5621 |
5634 |
3 |
20664601 |
20668213 |
Primers |
TRINITY_DN11415_c1_g1_i1 |
Trinucleotide |
(CCT)7 |
21 |
568 |
588 |
4 |
5820993 |
5827311 |
Primers |
TRINITY_DN11415_c1_g1_i1 |
Dinucleotide |
(TA)7 |
14 |
2885 |
2898 |
4 |
5820993 |
5827311 |
Primers |
TRINITY_DN11415_c1_g1_i1 |
Mononucleotide |
(A)12 |
12 |
6648 |
6659 |
4 |
5820993 |
5827311 |
Primers |
TRINITY_DN11415_c1_g1_i1 |
Compound |
(T)15aatttttccgggagagagaaagaagaa(AG)11 |
64 |
6858 |
6921 |
4 |
5820993 |
5827311 |
Primers |
TRINITY_DN13868_c1_g1_i7 |
Dinucleotide |
(AG)11 |
22 |
1473 |
1494 |
2 |
21072984 |
21075031 |
Primers |
TRINITY_DN13868_c1_g1_i7 |
Mononucleotide |
(A)22 |
22 |
3146 |
3167 |
2 |
21072984 |
21075031 |
Primers |
TRINITY_DN13868_c1_g1_i7 |
Mononucleotide |
(T)10 |
10 |
5148 |
5157 |
2 |
21072984 |
21075031 |
Primers |
TRINITY_DN13018_c1_g5_i21 |
Dinucleotide |
(GA)12 |
24 |
4393 |
4416 |
4 |
22051892 |
22054194 |
Primers |
TRINITY_DN13018_c1_g5_i21 |
Trinucleotide |
(AAG)9 |
27 |
4618 |
4644 |
4 |
22051892 |
22054194 |
Primers |
TRINITY_DN13018_c1_g5_i21 |
Mononucleotide |
(T)10 |
10 |
4750 |
4759 |
4 |
22051892 |
22054194 |
Primers |
TRINITY_DN12426_c0_g1_i21 |
Mononucleotide |
(A)11 |
11 |
6320 |
6330 |
4 |
20736019 |
20737528 |
Primers |
TRINITY_DN12426_c0_g1_i21 |
Mononucleotide |
(A)10 |
10 |
6435 |
6444 |
4 |
20736019 |
20737528 |
Primers |
TRINITY_DN12426_c0_g1_i21 |
Trinucleotide |
(AAG)8 |
24 |
6881 |
6904 |
4 |
20736019 |
20737528 |
Primers |
TRINITY_DN12338_c2_g1_i44 |
Mononucleotide |
(T)11 |
11 |
4301 |
4311 |
5 |
22131548 |
22134056 |
Primers |
TRINITY_DN12338_c2_g1_i44 |
Mononucleotide |
(T)10 |
10 |
4458 |
4467 |
5 |
22131548 |
22134056 |
Primers |
TRINITY_DN12338_c2_g1_i44 |
Dinucleotide |
(TA)6 |
12 |
5805 |
5816 |
5 |
22131548 |
22134056 |
Primers |
TRINITY_DN12510_c4_g1_i3 |
Trinucleotide |
(CAC)11 |
33 |
190 |
222 |
5 |
14035249 |
14037327 |
Primers |
TRINITY_DN12510_c4_g1_i3 |
Mononucleotide |
(T)10 |
10 |
5943 |
5952 |
5 |
14035249 |
14037327 |
Primers |
TRINITY_DN12510_c4_g1_i3 |
Mononucleotide |
(A)12 |
12 |
6139 |
6150 |
5 |
14035249 |
14037327 |
Primers |
TRINITY_DN12510_c4_g1_i3 |
Mononucleotide |
(T)13 |
13 |
6565 |
6577 |
5 |
14035249 |
14037327 |
Primers |
TRINITY_DN10448_c0_g1_i8 |
Mononucleotide |
(T)11 |
11 |
75 |
85 |
4 |
8964732 |
8967658 |
Primers |
TRINITY_DN14434_c3_g1_i19 |
Mononucleotide |
(A)12 |
12 |
5385 |
5396 |
3 |
14642374 |
14643695 |
Primers |
TRINITY_DN14582_c1_g1_i7 |
Trinucleotide |
(TTC)11 |
33 |
59 |
91 |
1 |
10704239 |
10703161 |
Primers |
TRINITY_DN14582_c1_g1_i7 |
Mononucleotide |
(T)10 |
10 |
4672 |
4681 |
1 |
10704239 |
10703161 |
Primers |
TRINITY_DN13008_c2_g7_i10 |
Mononucleotide |
(T)21 |
21 |
521 |
541 |
5 |
27606081 |
27599721 |
Primers |
TRINITY_DN13069_c0_g1_i16 |
Mononucleotide |
(A)12 |
12 |
1770 |
1781 |
6 |
14772051 |
14774077 |
Primers |
TRINITY_DN13069_c0_g1_i16 |
Tetranucleotide |
(AATT)5 |
20 |
5192 |
5211 |
6 |
14772051 |
14774077 |
Primers |
TRINITY_DN13050_c2_g1_i7 |
Dinucleotide |
(AT)6 |
12 |
3341 |
3352 |
6 |
1651880 |
1653603 |
Primers |
TRINITY_DN12632_c5_g1_i12 |
Compound |
(AGA)10a(AAG)6 |
49 |
6681 |
6729 |
5 |
16921582 |
16923714 |
Primers |
TRINITY_DN14014_c0_g1_i5 |
Mononucleotide |
(T)10 |
10 |
1279 |
1288 |
3 |
27988017 |
27985037 |
Primers |
TRINITY_DN13300_c0_g2_i1 |
Mononucleotide |
(A)10 |
10 |
423 |
432 |
6 |
647512 |
644784 |
Primers |
TRINITY_DN12684_c0_g1_i10 |
Mononucleotide |
(T)10 |
10 |
1996 |
2005 |
6 |
16473113 |
16474241 |
Primers |
TRINITY_DN13935_c2_g1_i11 |
Dinucleotide |
(CA)6 |
12 |
5573 |
5584 |
7 |
16226165 |
16227784 |
Primers |
TRINITY_DN14608_c0_g1_i13 |
Trinucleotide |
(AAG)5 |
15 |
838 |
852 |
7 |
12341979 |
12338899 |
Primers |
TRINITY_DN13864_c0_g2_i10 |
Mononucleotide |
(T)11 |
11 |
1092 |
1102 |
4 |
10802045 |
10800436 |
Primers |
TRINITY_DN12595_c0_g1_i3 |
Mononucleotide |
(T)18 |
18 |
11 |
28 |
2 |
3222745 |
3226369 |
Primers |
TRINITY_DN12595_c0_g1_i3 |
Compound |
(A)10tcgtatttcaaacacgagacatctaaaattcaattgtaatcaataaaataatcaaggtattcattcataccgacccatctacactc(CT)9 |
114 |
2713 |
2826 |
2 |
3222745 |
3226369 |
Primers |
TRINITY_DN12595_c0_g1_i3 |
Dinucleotide |
(TC)7 |
14 |
5238 |
5251 |
2 |
3222745 |
3226369 |
Primers |
TRINITY_DN12595_c0_g1_i3 |
Mononucleotide |
(T)10 |
10 |
6621 |
6630 |
2 |
3222745 |
3226369 |
Primers |
TRINITY_DN12034_c2_g5_i4 |
Mononucleotide |
(T)11 |
11 |
643 |
653 |
7 |
10749979 |
10756261 |
Primers |
TRINITY_DN12034_c2_g5_i4 |
Mononucleotide |
(A)10 |
10 |
2614 |
2623 |
7 |
10749979 |
10756261 |
Primers |
TRINITY_DN12034_c2_g5_i4 |
Mononucleotide |
(G)15 |
15 |
6753 |
6767 |
7 |
10749979 |
10756261 |
Primers |
TRINITY_DN13464_c1_g1_i6 |
Mononucleotide |
(A)11 |
11 |
3914 |
3924 |
7 |
17906581 |
17909735 |
Primers |
TRINITY_DN14496_c0_g1_i20 |
Trinucleotide |
(CTT)5 |
15 |
32 |
46 |
5 |
8191448 |
8189465 |
Primers |
TRINITY_DN14496_c0_g1_i20 |
Mononucleotide |
(A)12 |
12 |
6459 |
6470 |
5 |
8191448 |
8189465 |
Primers |
TRINITY_DN14496_c0_g1_i20 |
Trinucleotide |
(AGA)8 |
24 |
6664 |
6687 |
5 |
8191448 |
8189465 |
Primers |
TRINITY_DN14496_c0_g1_i20 |
Dinucleotide |
(AG)11 |
22 |
6826 |
6847 |
5 |
8191448 |
8189465 |
Primers |
TRINITY_DN14136_c2_g1_i21 |
Mononucleotide |
(T)10 |
10 |
166 |
175 |
4 |
6755850 |
6757224 |
Primers |
TRINITY_DN14136_c2_g1_i21 |
Trinucleotide |
(TAA)7 |
21 |
4197 |
4217 |
4 |
6755850 |
6757224 |
Primers |
TRINITY_DN14236_c2_g7_i2 |
Trinucleotide |
(TTC)9 |
27 |
905 |
931 |
6 |
9232638 |
9239413 |
Primers |
TRINITY_DN11392_c0_g1_i14 |
Dinucleotide |
(TC)9 |
18 |
161 |
178 |
5 |
23921120 |
23924493 |
Primers |
TRINITY_DN11392_c0_g1_i14 |
Dinucleotide |
(TA)6 |
12 |
3088 |
3099 |
5 |
23921120 |
23924493 |
Primers |
TRINITY_DN11392_c0_g1_i14 |
Dinucleotide |
(GA)8 |
16 |
5888 |
5903 |
5 |
23921120 |
23924493 |
Primers |
TRINITY_DN12522_c4_g2_i4 |
Compound |
(T)10ctttgaacattagtctcactaactcgtttccgtttcagg(A)11 |
60 |
46 |
105 |
1 |
3236367 |
3238327 |
Primers |
TRINITY_DN12522_c4_g2_i4 |
Mononucleotide |
(T)13 |
13 |
763 |
775 |
1 |
3236367 |
3238327 |
Primers |
TRINITY_DN12522_c4_g2_i4 |
Mononucleotide |
(T)12 |
12 |
1665 |
1676 |
1 |
3236367 |
3238327 |
Primers |
TRINITY_DN12522_c4_g2_i4 |
Dinucleotide |
(AT)6 |
12 |
5279 |
5290 |
1 |
3236367 |
3238327 |
Primers |
TRINITY_DN12664_c1_g1_i2 |
Mononucleotide |
(T)12 |
12 |
1895 |
1906 |
1 |
6315815 |
6319507 |
Primers |
TRINITY_DN12175_c0_g1_i8 |
Mononucleotide |
(T)11 |
11 |
650 |
660 |
3 |
7636430 |
7634159 |
Primers |
TRINITY_DN12175_c0_g1_i8 |
Mononucleotide |
(A)10 |
10 |
2791 |
2800 |
3 |
7636430 |
7634159 |
Primers |
TRINITY_DN12175_c0_g1_i8 |
Mononucleotide |
(A)11 |
11 |
6026 |
6036 |
3 |
7636430 |
7634159 |
Primers |
TRINITY_DN14335_c1_g1_i11 |
Trinucleotide |
(CTT)7 |
21 |
78 |
98 |
5 |
8127025 |
8130221 |
Primers |
TRINITY_DN14335_c1_g1_i11 |
Mononucleotide |
(A)14 |
14 |
4141 |
4154 |
5 |
8127025 |
8130221 |
Primers |
TRINITY_DN14335_c1_g1_i11 |
Dinucleotide |
(AT)6 |
12 |
4547 |
4558 |
5 |
8127025 |
8130221 |
Primers |
TRINITY_DN11945_c0_g1_i18 |
Tetranucleotide |
(TCAT)5 |
20 |
306 |
325 |
3 |
30417001 |
30421904 |
Primers |
TRINITY_DN11945_c0_g1_i18 |
Trinucleotide |
(AAG)8 |
24 |
5269 |
5292 |
3 |
30417001 |
30421904 |
Primers |
TRINITY_DN11021_c1_g1_i2 |
Compound |
(GAA)6aaatggagtttaaacatttaatttcctttttctttttcc(T)10 |
67 |
3493 |
3559 |
5 |
4448485 |
4450281 |
Primers |
TRINITY_DN11529_c1_g4_i6 |
Mononucleotide |
(A)17 |
17 |
1320 |
1336 |
3 |
33073780 |
33080560 |
Primers |
TRINITY_DN11529_c1_g4_i6 |
Mononucleotide |
(T)12 |
12 |
3888 |
3899 |
3 |
33073780 |
33080560 |
Primers |
TRINITY_DN11529_c1_g4_i6 |
Compound |
(AT)6(A)19 |
31 |
6251 |
6281 |
3 |
33073780 |
33080560 |
Primers |
TRINITY_DN14294_c1_g1_i12 |
Tetranucleotide |
(GGAA)11 |
44 |
6280 |
6323 |
2 |
18076186 |
18074402 |
Primers |
TRINITY_DN14294_c1_g1_i12 |
Compound |
(T)12(A)12 |
24 |
6760 |
6783 |
2 |
18076186 |
18074402 |
Primers |
TRINITY_DN13970_c0_g1_i3 |
Mononucleotide |
(T)10 |
10 |
5857 |
5866 |
3 |
8745638 |
8742045 |
Primers |
TRINITY_DN14688_c2_g1_i3 |
Compound |
(T)10actgttcaaaataaaagaaaaaaagttttgcagaatgatctataaaataaaccaaaaacaatacag(T)11 |
87 |
1486 |
1572 |
4 |
12912861 |
12913904 |
Primers |
TRINITY_DN14688_c2_g1_i3 |
Mononucleotide |
(A)11 |
11 |
2186 |
2196 |
4 |
12912861 |
12913904 |
Primers |
TRINITY_DN14688_c2_g1_i3 |
Compound |
(TA)6atataagatgtttataggaaatgttcggaattccgtttttacaa(T)10 |
66 |
3094 |
3159 |
4 |
12912861 |
12913904 |
Primers |
TRINITY_DN14688_c2_g1_i3 |
Mononucleotide |
(A)10 |
10 |
4440 |
4449 |
4 |
12912861 |
12913904 |
Primers |
TRINITY_DN12772_c0_g6_i3 |
Mononucleotide |
(T)16 |
16 |
2048 |
2063 |
6 |
20559274 |
20562154 |
Primers |
TRINITY_DN12772_c0_g6_i3 |
Dinucleotide |
(TA)8 |
16 |
6424 |
6439 |
6 |
20559274 |
20562154 |
Primers |
TRINITY_DN13912_c1_g2_i10 |
Mononucleotide |
(A)10 |
10 |
1456 |
1465 |
6 |
3613033 |
3619805 |
Primers |
TRINITY_DN13912_c1_g2_i10 |
Mononucleotide |
(A)14 |
14 |
2009 |
2022 |
6 |
3613033 |
3619805 |
Primers |
TRINITY_DN13912_c1_g2_i10 |
Mononucleotide |
(A)10 |
10 |
2299 |
2308 |
6 |
3613033 |
3619805 |
Primers |
TRINITY_DN13738_c3_g2_i3 |
Mononucleotide |
(T)16 |
16 |
60 |
75 |
4 |
10694550 |
10691939 |
Primers |
TRINITY_DN13738_c3_g2_i3 |
Mononucleotide |
(A)18 |
18 |
6298 |
6315 |
4 |
10694550 |
10691939 |
Primers |
TRINITY_DN13738_c3_g2_i3 |
Compound |
(TC)6(TA)7 |
26 |
6697 |
6722 |
4 |
10694550 |
10691939 |
Primers |
TRINITY_DN13918_c3_g1_i3 |
Trinucleotide |
(CTT)5 |
15 |
3771 |
3785 |
5 |
1152506 |
1149650 |
Primers |
TRINITY_DN13433_c0_g1_i4 |
Mononucleotide |
(G)10 |
10 |
5956 |
5965 |
4 |
21347748 |
21350112 |
Primers |
TRINITY_DN13433_c0_g1_i4 |
Trinucleotide |
(AGG)8 |
24 |
6434 |
6457 |
4 |
21347748 |
21350112 |
Primers |
TRINITY_DN13424_c0_g1_i8 |
Compound |
(TG)6cgtgttaatttccttgaacacattgagccgcttcactacagtcgtttttttgtagccattcttctgatagcatcaattggagcg(T)19 |
115 |
5921 |
6035 |
3 |
11693554 |
11692374 |
Primers |
TRINITY_DN12512_c2_g1_i20 |
Mononucleotide |
(A)10 |
10 |
4971 |
4980 |
7 |
7240109 |
7242434 |
Primers |
TRINITY_DN11889_c7_g1_i6 |
Mononucleotide |
(T)11 |
11 |
1650 |
1660 |
1 |
25736024 |
25732168 |
Primers |
TRINITY_DN11889_c7_g1_i6 |
Mononucleotide |
(T)11 |
11 |
3753 |
3763 |
1 |
25736024 |
25732168 |
Primers |
TRINITY_DN11323_c0_g2_i32 |
Mononucleotide |
(T)11 |
11 |
6586 |
6596 |
3 |
28380560 |
28383625 |
Primers |
TRINITY_DN14195_c2_g1_i7 |
Mononucleotide |
(A)24 |
24 |
5610 |
5633 |
6 |
19810114 |
19811530 |
Primers |
TRINITY_DN12248_c1_g4_i4 |
Mononucleotide |
(T)10 |
10 |
2677 |
2686 |
4 |
8920456 |
8924002 |
Primers |
TRINITY_DN12248_c1_g4_i4 |
Compound |
(A)13gatttgaagttcactggaaaacaaaacttagtcaactatcttctacattgaatgaattgtacgattaatttcgagtagcgttcatttctgact(A)12 |
118 |
3011 |
3128 |
4 |
8920456 |
8924002 |
Primers |
TRINITY_DN12505_c0_g2_i7 |
Mononucleotide |
(T)11 |
11 |
2894 |
2904 |
6 |
4532940 |
4528904 |
Primers |
TRINITY_DN12505_c0_g2_i7 |
Dinucleotide |
(AT)6 |
12 |
5224 |
5235 |
6 |
4532940 |
4528904 |
Primers |
TRINITY_DN12752_c1_g1_i4 |
Trinucleotide |
(TTA)5 |
15 |
450 |
464 |
6 |
9262841 |
9264253 |
Primers |
TRINITY_DN13225_c4_g1_i3 |
Trinucleotide |
(TCC)6 |
18 |
150 |
167 |
3 |
23839425 |
23842548 |
Primers |
TRINITY_DN13225_c4_g1_i3 |
Mononucleotide |
(T)16 |
16 |
723 |
738 |
3 |
23839425 |
23842548 |
Primers |
TRINITY_DN12073_c1_g2_i7 |
Mononucleotide |
(T)13 |
13 |
2035 |
2047 |
6 |
10191522 |
10195926 |
Primers |
TRINITY_DN13509_c1_g1_i6 |
Dinucleotide |
(CT)7 |
14 |
40 |
53 |
5 |
8336479 |
8334458 |
Primers |
TRINITY_DN12506_c0_g4_i6 |
Dinucleotide |
(AT)7 |
14 |
3004 |
3017 |
3 |
36964453 |
36960807 |
Primers |
TRINITY_DN12506_c0_g4_i6 |
Mononucleotide |
(A)10 |
10 |
4393 |
4402 |
3 |
36964453 |
36960807 |
Primers |
TRINITY_DN10750_c0_g1_i22 |
Dinucleotide |
(CT)6 |
12 |
86 |
97 |
1 |
15308437 |
15315145 |
Primers |
TRINITY_DN11901_c3_g1_i18 |
Compound |
(AG)6atgcaaaggcacaaaatacattgttgaaatcggcattcttatttg(CT)7(CA)7 |
85 |
2065 |
2149 |
3 |
9843196 |
9838314 |
Primers |
TRINITY_DN11901_c3_g1_i18 |
Mononucleotide |
(T)13 |
13 |
6570 |
6582 |
3 |
9843196 |
9838314 |
Primers |
TRINITY_DN13892_c0_g1_i5 |
Mononucleotide |
(A)14 |
14 |
1232 |
1245 |
4 |
22879381 |
22881827 |
Primers |
TRINITY_DN13892_c0_g1_i5 |
Mononucleotide |
(T)10 |
10 |
3119 |
3128 |
4 |
22879381 |
22881827 |
Primers |
TRINITY_DN13892_c0_g1_i5 |
Mononucleotide |
(A)10 |
10 |
6404 |
6413 |
4 |
22879381 |
22881827 |
Primers |
TRINITY_DN11343_c0_g1_i2 |
Dinucleotide |
(AG)6 |
12 |
6678 |
6689 |
7 |
10471937 |
10465242 |
Primers |
TRINITY_DN13279_c1_g1_i7 |
Mononucleotide |
(G)11 |
11 |
3129 |
3139 |
2 |
6242210 |
6239885 |
Primers |
TRINITY_DN13279_c1_g1_i7 |
Mononucleotide |
(T)10 |
10 |
4177 |
4186 |
2 |
6242210 |
6239885 |
Primers |
TRINITY_DN11950_c0_g1_i19 |
Dinucleotide |
(AT)8 |
16 |
472 |
487 |
6 |
28785369 |
28790334 |
Primers |
TRINITY_DN11950_c0_g1_i19 |
Dinucleotide |
(TA)8 |
16 |
2791 |
2806 |
6 |
28785369 |
28790334 |
Primers |
TRINITY_DN14320_c1_g1_i5 |
Mononucleotide |
(A)12 |
12 |
5548 |
5559 |
4 |
18303730 |
18304377 |
Primers |
TRINITY_DN11488_c0_g1_i2 |
Mononucleotide |
(T)13 |
13 |
468 |
480 |
Scaffold000113 |
236328 |
234186 |
Primers |
TRINITY_DN12231_c3_g1_i10 |
Mononucleotide |
(A)27 |
27 |
2150 |
2176 |
7 |
17414827 |
17411784 |
Primers |
TRINITY_DN12231_c3_g1_i10 |
Trinucleotide |
(AAT)5 |
15 |
2390 |
2404 |
7 |
17414827 |
17411784 |
Primers |
TRINITY_DN14187_c2_g2_i12 |
Dinucleotide |
(AG)7 |
14 |
1331 |
1344 |
3 |
772919 |
775809 |
Primers |
TRINITY_DN14187_c2_g2_i12 |
Tetranucleotide |
(GAAA)5 |
20 |
1462 |
1481 |
3 |
772919 |
775809 |
Primers |
TRINITY_DN14187_c2_g2_i12 |
Mononucleotide |
(T)17 |
17 |
4200 |
4216 |
3 |
772919 |
775809 |
Primers |
TRINITY_DN14187_c2_g2_i12 |
Mononucleotide |
(A)10 |
10 |
5522 |
5531 |
3 |
772919 |
775809 |
Primers |
TRINITY_DN14187_c2_g2_i12 |
Mononucleotide |
(A)11 |
11 |
6043 |
6053 |
3 |
772919 |
775809 |
Primers |
TRINITY_DN12244_c0_g2_i5 |
Mononucleotide |
(T)31 |
31 |
439 |
469 |
5 |
11748721 |
11747161 |
Primers |
TRINITY_DN12244_c0_g2_i5 |
Mononucleotide |
(T)11 |
11 |
2683 |
2693 |
5 |
11748721 |
11747161 |
Primers |
TRINITY_DN12244_c0_g2_i5 |
Dinucleotide |
(GA)8 |
16 |
3517 |
3532 |
5 |
11748721 |
11747161 |
Primers |
TRINITY_DN14064_c0_g3_i2 |
Dinucleotide |
(GA)8 |
16 |
3604 |
3619 |
6 |
25403244 |
25406621 |
Primers |
TRINITY_DN14064_c0_g3_i2 |
Dinucleotide |
(AT)9 |
18 |
5119 |
5136 |
6 |
25403244 |
25406621 |
Primers |
TRINITY_DN14064_c0_g3_i2 |
Trinucleotide |
(TTC)5 |
15 |
6351 |
6365 |
6 |
25403244 |
25406621 |
Primers |
TRINITY_DN13702_c0_g1_i14 |
Trinucleotide |
(AGA)6 |
18 |
826 |
843 |
6 |
15592135 |
15587772 |
Primers |
TRINITY_DN13702_c0_g1_i14 |
Mononucleotide |
(A)11 |
11 |
2798 |
2808 |
6 |
15592135 |
15587772 |
Primers |
TRINITY_DN14524_c0_g1_i7 |
Mononucleotide |
(T)21 |
21 |
244 |
264 |
2 |
20442977 |
20438889 |
Primers |
TRINITY_DN14524_c0_g1_i7 |
Mononucleotide |
(A)10 |
10 |
4230 |
4239 |
2 |
20442977 |
20438889 |
Primers |
TRINITY_DN12421_c2_g5_i1 |
Mononucleotide |
(T)15 |
15 |
3437 |
3451 |
7 |
9650869 |
9647276 |
Primers |
TRINITY_DN13355_c5_g1_i1 |
Mononucleotide |
(A)13 |
13 |
2425 |
2437 |
6 |
24335726 |
24333935 |
Primers |
TRINITY_DN13355_c5_g1_i1 |
Mononucleotide |
(A)12 |
12 |
6484 |
6495 |
6 |
24335726 |
24333935 |
Primers |
TRINITY_DN13854_c0_g2_i4 |
Pentanucleotide |
(CCCCT)5 |
25 |
1750 |
1774 |
7 |
19028683 |
19026655 |
Primers |
TRINITY_DN13854_c0_g2_i4 |
Mononucleotide |
(A)14 |
14 |
4130 |
4143 |
7 |
19028683 |
19026655 |
Primers |
TRINITY_DN11708_c0_g1_i1 |
Mononucleotide |
(T)11 |
11 |
831 |
841 |
7 |
15518665 |
15516698 |
Primers |
TRINITY_DN13169_c0_g1_i37 |
Mononucleotide |
(T)15 |
15 |
221 |
235 |
6 |
27212090 |
27214126 |
Primers |
TRINITY_DN13169_c0_g1_i37 |
Mononucleotide |
(A)11 |
11 |
3764 |
3774 |
6 |
27212090 |
27214126 |
Primers |
TRINITY_DN14074_c2_g1_i44 |
Mononucleotide |
(T)10 |
10 |
5582 |
5591 |
2 |
16477403 |
16479435 |
Primers |
TRINITY_DN13009_c0_g2_i21 |
Compound |
(AG)11(A)21 |
43 |
8 |
50 |
1 |
24871716 |
24865480 |
Primers |
TRINITY_DN13009_c0_g2_i21 |
Compound |
(TCT)7(TCC)5 |
36 |
179 |
214 |
1 |
24871716 |
24865480 |
Primers |
TRINITY_DN13009_c0_g2_i21 |
Mononucleotide |
(T)11 |
11 |
1778 |
1788 |
1 |
24871716 |
24865480 |
Primers |
TRINITY_DN13009_c0_g2_i21 |
Trinucleotide |
(TAT)7 |
21 |
5164 |
5184 |
1 |
24871716 |
24865480 |
Primers |
TRINITY_DN14124_c1_g1_i35 |
Dinucleotide |
(AT)7 |
14 |
619 |
632 |
6 |
9392390 |
9394144 |
Primers |
TRINITY_DN13201_c0_g1_i10 |
Mononucleotide |
(T)15 |
15 |
1854 |
1868 |
4 |
22540818 |
22542466 |
Primers |
TRINITY_DN13201_c0_g1_i10 |
Trinucleotide |
(ATC)5 |
15 |
6161 |
6175 |
4 |
22540818 |
22542466 |
Primers |
TRINITY_DN13201_c0_g1_i10 |
Mononucleotide |
(A)13 |
13 |
6514 |
6526 |
4 |
22540818 |
22542466 |
Primers |
TRINITY_DN11293_c1_g1_i9 |
Compound |
(A)13gaagaaaaagg(A)11 |
35 |
1229 |
1263 |
6 |
18010885 |
18014124 |
Primers |
TRINITY_DN14579_c0_g1_i17 |
Mononucleotide |
(A)20 |
20 |
2648 |
2667 |
2 |
12090035 |
12092855 |
Primers |
TRINITY_DN12690_c0_g1_i3 |
Mononucleotide |
(T)10 |
10 |
1191 |
1200 |
3 |
7664398 |
7662444 |
Primers |
TRINITY_DN12690_c0_g1_i3 |
Dinucleotide |
(AT)8 |
16 |
6084 |
6099 |
3 |
7664398 |
7662444 |
Primers |
TRINITY_DN13568_c1_g1_i7 |
Trinucleotide |
(TCT)6 |
18 |
35 |
52 |
5 |
17687066 |
17689095 |
Primers |
TRINITY_DN13568_c1_g1_i7 |
Mononucleotide |
(T)15 |
15 |
474 |
488 |
5 |
17687066 |
17689095 |
Primers |
TRINITY_DN13354_c3_g4_i3 |
Dinucleotide |
(TC)6 |
12 |
4266 |
4277 |
5 |
5256897 |
5251218 |
Primers |
TRINITY_DN13354_c3_g4_i3 |
Mononucleotide |
(T)10 |
10 |
4391 |
4400 |
5 |
5256897 |
5251218 |
Primers |
TRINITY_DN13354_c3_g4_i3 |
Mononucleotide |
(A)10 |
10 |
5436 |
5445 |
5 |
5256897 |
5251218 |
Primers |
TRINITY_DN12806_c0_g2_i5 |
Mononucleotide |
(T)11 |
11 |
1719 |
1729 |
4 |
20868203 |
20874649 |
Primers |
TRINITY_DN12806_c0_g2_i5 |
Mononucleotide |
(A)11 |
11 |
3947 |
3957 |
4 |
20868203 |
20874649 |
Primers |
TRINITY_DN12806_c0_g2_i5 |
Mononucleotide |
(A)10 |
10 |
6221 |
6230 |
4 |
20868203 |
20874649 |
Primers |
TRINITY_DN12818_c2_g1_i5 |
Mononucleotide |
(A)14 |
14 |
4412 |
4425 |
6 |
28233378 |
28230179 |
Primers |
TRINITY_DN13469_c0_g2_i3 |
Compound |
(TCT)8ctcttttctataatgcctttgttgtttttgttgggaatggaacttcatc(T)11 |
84 |
1 |
84 |
2 |
13309500 |
13306746 |
Primers |
TRINITY_DN13469_c0_g2_i3 |
Mononucleotide |
(A)20 |
20 |
416 |
435 |
2 |
13309500 |
13306746 |
Primers |
TRINITY_DN13469_c0_g2_i3 |
Dinucleotide |
(AG)6 |
12 |
928 |
939 |
2 |
13309500 |
13306746 |
Primers |
TRINITY_DN13469_c0_g2_i3 |
Mononucleotide |
(T)10 |
10 |
3347 |
3356 |
2 |
13309500 |
13306746 |
Primers |
TRINITY_DN13660_c0_g2_i18 |
Mononucleotide |
(A)14 |
14 |
1417 |
1430 |
1 |
4443824 |
4445558 |
Primers |
TRINITY_DN13660_c0_g2_i18 |
Mononucleotide |
(T)11 |
11 |
1556 |
1566 |
1 |
4443824 |
4445558 |
Primers |
TRINITY_DN13660_c0_g2_i18 |
Mononucleotide |
(A)16 |
16 |
5749 |
5764 |
1 |
4443824 |
4445558 |
Primers |
TRINITY_DN14123_c0_g4_i4 |
Mononucleotide |
(T)10 |
10 |
305 |
314 |
5 |
5117107 |
5121655 |
Primers |
TRINITY_DN14123_c0_g4_i4 |
Mononucleotide |
(T)13 |
13 |
2725 |
2737 |
5 |
5117107 |
5121655 |
Primers |
TRINITY_DN14123_c0_g4_i4 |
Mononucleotide |
(A)22 |
22 |
2917 |
2938 |
5 |
5117107 |
5121655 |
Primers |
TRINITY_DN12918_c1_g2_i3 |
Dinucleotide |
(TA)6 |
12 |
6251 |
6262 |
6 |
6279178 |
6282690 |
Primers |
TRINITY_DN12918_c1_g2_i3 |
Trinucleotide |
(GAA)11 |
33 |
6511 |
6543 |
6 |
6279178 |
6282690 |
Primers |
TRINITY_DN13907_c2_g1_i9 |
Dinucleotide |
(CT)8 |
16 |
353 |
368 |
4 |
18104357 |
18102989 |
Primers |
TRINITY_DN13907_c2_g1_i9 |
Mononucleotide |
(A)10 |
10 |
4194 |
4203 |
4 |
18104357 |
18102989 |
Primers |
TRINITY_DN14067_c2_g1_i8 |
Mononucleotide |
(A)15 |
15 |
210 |
224 |
7 |
16037068 |
16034548 |
Primers |
TRINITY_DN14067_c2_g1_i8 |
Mononucleotide |
(A)25 |
25 |
3295 |
3319 |
7 |
16037068 |
16034548 |
Primers |
TRINITY_DN14067_c2_g1_i8 |
Compound |
(GAAGT)5gtaaagaagaagcagagggagggagggg(GA)14 |
81 |
3952 |
4032 |
7 |
16037068 |
16034548 |
Primers |
TRINITY_DN11772_c4_g1_i7 |
Mononucleotide |
(A)10 |
10 |
69 |
78 |
6 |
9980914 |
9976638 |
Primers |
TRINITY_DN11772_c4_g1_i7 |
Mononucleotide |
(A)17 |
17 |
4262 |
4278 |
6 |
9980914 |
9976638 |
Primers |
TRINITY_DN11772_c4_g1_i7 |
Dinucleotide |
(TA)8 |
16 |
4906 |
4921 |
6 |
9980914 |
9976638 |
Primers |
TRINITY_DN11772_c4_g1_i7 |
Mononucleotide |
(A)12 |
12 |
6408 |
6419 |
6 |
9980914 |
9976638 |
Primers |
TRINITY_DN12657_c0_g1_i42 |
Mononucleotide |
(A)11 |
11 |
9 |
19 |
4 |
23244181 |
23242303 |
Primers |
TRINITY_DN12657_c0_g1_i42 |
Mononucleotide |
(T)10 |
10 |
123 |
132 |
4 |
23244181 |
23242303 |
Primers |
TRINITY_DN12807_c3_g1_i2 |
Mononucleotide |
(A)10 |
10 |
1126 |
1135 |
1 |
27099281 |
27095505 |
Primers |
TRINITY_DN12807_c3_g1_i2 |
Dinucleotide |
(TA)6 |
12 |
3439 |
3450 |
1 |
27099281 |
27095505 |
Primers |
TRINITY_DN12488_c1_g2_i6 |
Mononucleotide |
(T)19 |
19 |
745 |
763 |
3 |
36336325 |
36329800 |
Primers |
TRINITY_DN12488_c1_g2_i6 |
Dinucleotide |
(GA)12 |
24 |
6454 |
6477 |
3 |
36336325 |
36329800 |
Primers |
TRINITY_DN12673_c0_g5_i5 |
Trinucleotide |
(TTC)7 |
21 |
329 |
349 |
7 |
4294964 |
4297753 |
Primers |
TRINITY_DN12673_c0_g5_i5 |
Dinucleotide |
(AG)8 |
16 |
6435 |
6450 |
7 |
4294964 |
4297753 |
Primers |
TRINITY_DN13404_c4_g2_i34 |
Mononucleotide |
(T)10 |
10 |
5352 |
5361 |
1 |
20800771 |
20797527 |
Primers |
TRINITY_DN13404_c4_g2_i34 |
Mononucleotide |
(T)11 |
11 |
6043 |
6053 |
1 |
20800771 |
20797527 |
Primers |
TRINITY_DN11666_c2_g2_i4 |
Mononucleotide |
(T)12 |
12 |
1763 |
1774 |
3 |
12540732 |
12544972 |
Primers |
TRINITY_DN11666_c2_g2_i4 |
Mononucleotide |
(A)19 |
19 |
5095 |
5113 |
3 |
12540732 |
12544972 |
Primers |
TRINITY_DN13609_c1_g2_i7 |
Mononucleotide |
(T)12 |
12 |
5584 |
5595 |
4 |
4637752 |
4640473 |
Primers |
TRINITY_DN13810_c1_g1_i6 |
Dinucleotide |
(AT)8 |
16 |
6326 |
6341 |
5 |
21772485 |
21769803 |
Primers |
TRINITY_DN11748_c2_g1_i17 |
Compound |
(TA)6cacacaacacattgtgtgtggaaccgactagtggaaaaacaaagtctcaagcctttctttataaaac(A)10 |
89 |
269 |
357 |
6 |
1723011 |
1726880 |
Primers |
TRINITY_DN14132_c1_g1_i19 |
Mononucleotide |
(A)16 |
16 |
1055 |
1070 |
1 |
10601646 |
10599143 |
Primers |
TRINITY_DN11817_c2_g1_i6 |
Mononucleotide |
(A)24 |
24 |
523 |
546 |
3 |
21464673 |
21459833 |
Primers |
TRINITY_DN11817_c2_g1_i6 |
Mononucleotide |
(A)12 |
12 |
863 |
874 |
3 |
21464673 |
21459833 |
Primers |
TRINITY_DN11817_c2_g1_i6 |
Trinucleotide |
(AAC)6 |
18 |
6006 |
6023 |
3 |
21464673 |
21459833 |
Primers |
TRINITY_DN11817_c2_g1_i6 |
Trinucleotide |
(AAG)5 |
15 |
6360 |
6374 |
3 |
21464673 |
21459833 |
Primers |
TRINITY_DN11531_c0_g1_i5 |
Compound |
(T)10caaaatatatactctt(TA)9 |
44 |
5047 |
5090 |
2 |
5726734 |
5723197 |
Primers |
TRINITY_DN11531_c0_g1_i5 |
Trinucleotide |
(AGG)5 |
15 |
6455 |
6469 |
2 |
5726734 |
5723197 |
Primers |
TRINITY_DN10858_c0_g1_i5 |
Mononucleotide |
(T)14 |
14 |
1024 |
1037 |
5 |
19560081 |
19565232 |
Primers |
TRINITY_DN13327_c0_g2_i2 |
Dinucleotide |
(TG)6 |
12 |
2165 |
2176 |
3 |
33297545 |
33292703 |
Primers |
TRINITY_DN13327_c0_g2_i2 |
Mononucleotide |
(A)14 |
14 |
6369 |
6382 |
3 |
33297545 |
33292703 |
Primers |
TRINITY_DN11218_c0_g1_i5 |
Mononucleotide |
(T)11 |
11 |
1711 |
1721 |
1 |
18569212 |
18574524 |
Primers |
TRINITY_DN13151_c1_g2_i13 |
Dinucleotide |
(TG)11 |
22 |
6274 |
6295 |
2 |
939777 |
938619 |
Primers |
TRINITY_DN12069_c0_g2_i2 |
Compound |
(T)10gtttttttcgcggttcaatcagtcgaggtaggtatatgattttttcattgtcttttaa(T)10gtcatgagttttggttaatctgaatccacagagattaatatgaatgcatggataattggatttgatcacttgtgcgtccgtttgacgagaatttttca(T)10 |
186 |
216 |
401 |
3 |
37065860 |
37068851 |
Primers |
TRINITY_DN11467_c0_g1_i5 |
Mononucleotide |
(A)12 |
12 |
1350 |
1361 |
6 |
28666559 |
28669892 |
Primers |
TRINITY_DN12658_c1_g1_i5 |
Mononucleotide |
(T)18 |
18 |
202 |
219 |
1 |
1584799 |
1589056 |
Primers |
TRINITY_DN12658_c1_g1_i5 |
Mononucleotide |
(T)12 |
12 |
3098 |
3109 |
1 |
1584799 |
1589056 |
Primers |
TRINITY_DN12658_c1_g1_i5 |
Mononucleotide |
(A)10 |
10 |
5596 |
5605 |
1 |
1584799 |
1589056 |
Primers |
TRINITY_DN12480_c0_g1_i11 |
Trinucleotide |
(TTA)5 |
15 |
5704 |
5718 |
1 |
358913 |
361387 |
Primers |
TRINITY_DN12409_c2_g3_i4 |
Mononucleotide |
(A)12 |
12 |
1292 |
1303 |
6 |
25146741 |
25151286 |
Primers |
TRINITY_DN12409_c2_g3_i4 |
Compound |
(AG)10aagagggaaagatagagagaggagtgaatatatgtatgtacatgagaatccagacaaagaataggagaaagagaa(AG)6 |
107 |
5605 |
5711 |
6 |
25146741 |
25151286 |
Primers |
TRINITY_DN13713_c1_g5_i1 |
Mononucleotide |
(T)12 |
12 |
412 |
423 |
5 |
5294566 |
5288122 |
Primers |
TRINITY_DN13713_c1_g5_i1 |
Mononucleotide |
(A)12 |
12 |
5365 |
5376 |
5 |
5294566 |
5288122 |
Primers |
TRINITY_DN13422_c0_g1_i12 |
Mononucleotide |
(T)11 |
11 |
2810 |
2820 |
3 |
28837638 |
28834558 |
Primers |
TRINITY_DN13422_c0_g1_i12 |
Trinucleotide |
(GGT)5 |
15 |
5212 |
5226 |
3 |
28837638 |
28834558 |
Primers |
TRINITY_DN13599_c0_g2_i2 |
Mononucleotide |
(A)10 |
10 |
4683 |
4692 |
5 |
23266571 |
23263630 |
Primers |
TRINITY_DN13163_c0_g2_i1 |
Trinucleotide |
(TCT)5 |
15 |
6365 |
6379 |
3 |
13515575 |
13509134 |
Primers |
TRINITY_DN11213_c0_g1_i28 |
Mononucleotide |
(T)11 |
11 |
331 |
341 |
1 |
2061290 |
2059775 |
Primers |
TRINITY_DN11213_c0_g1_i28 |
Mononucleotide |
(T)10 |
10 |
4500 |
4509 |
1 |
2061290 |
2059775 |
Primers |
TRINITY_DN12884_c0_g1_i1 |
Dinucleotide |
(AG)16 |
32 |
1642 |
1673 |
6 |
3888172 |
3883385 |
Primers |
TRINITY_DN12884_c0_g1_i1 |
Mononucleotide |
(A)12 |
12 |
2903 |
2914 |
6 |
3888172 |
3883385 |
Primers |
TRINITY_DN12884_c0_g1_i1 |
Mononucleotide |
(T)11 |
11 |
5932 |
5942 |
6 |
3888172 |
3883385 |
Primers |
TRINITY_DN12459_c3_g1_i15 |
Mononucleotide |
(A)11 |
11 |
437 |
447 |
4 |
21103999 |
21100598 |
Primers |
TRINITY_DN12459_c3_g1_i15 |
Compound |
(AG)7aaagagaa(AG)7 |
36 |
694 |
729 |
4 |
21103999 |
21100598 |
Primers |
TRINITY_DN12459_c3_g1_i15 |
Compound |
(CT)6(CA)7 |
26 |
1362 |
1387 |
4 |
21103999 |
21100598 |
Primers |
TRINITY_DN12459_c3_g1_i15 |
Dinucleotide |
(GA)11 |
22 |
6367 |
6388 |
4 |
21103999 |
21100598 |
Primers |
TRINITY_DN12964_c5_g2_i14 |
Compound |
(T)13c(T)10c(T)12 |
37 |
6 |
42 |
6 |
27895360 |
27890305 |
Primers |
TRINITY_DN12964_c5_g2_i14 |
Mononucleotide |
(T)10 |
10 |
244 |
253 |
6 |
27895360 |
27890305 |
Primers |
TRINITY_DN12964_c5_g2_i14 |
Mononucleotide |
(T)15 |
15 |
1932 |
1946 |
6 |
27895360 |
27890305 |
Primers |
TRINITY_DN12964_c5_g2_i14 |
Trinucleotide |
(ATA)5 |
15 |
4559 |
4573 |
6 |
27895360 |
27890305 |
Primers |
TRINITY_DN12964_c5_g2_i14 |
Mononucleotide |
(A)14 |
14 |
5874 |
5887 |
6 |
27895360 |
27890305 |
Primers |
TRINITY_DN12964_c5_g2_i14 |
Compound |
(AG)9aagaagaaaatcaaaatacctgaagaagcaacagagtccgtcttcttcttcctctcctccttcctcctccg(TC)8 |
105 |
6264 |
6368 |
6 |
27895360 |
27890305 |
Primers |
TRINITY_DN12119_c0_g1_i17 |
Trinucleotide |
(AGA)6 |
18 |
5887 |
5904 |
3 |
10776919 |
10779067 |
Primers |
TRINITY_DN12568_c1_g1_i8 |
Mononucleotide |
(A)11 |
11 |
4695 |
4705 |
4 |
9771345 |
9775027 |
Primers |
TRINITY_DN13808_c1_g1_i8 |
Mononucleotide |
(A)13 |
13 |
5886 |
5898 |
2 |
4647849 |
4648961 |
Primers |
TRINITY_DN13866_c1_g2_i4 |
Mononucleotide |
(A)10 |
10 |
2759 |
2768 |
3 |
14791634 |
14794733 |
Primers |
TRINITY_DN11204_c0_g1_i11 |
Mononucleotide |
(T)13 |
13 |
263 |
275 |
7 |
16296236 |
16290785 |
Primers |
TRINITY_DN11200_c3_g8_i1 |
Trinucleotide |
(ATT)5 |
15 |
6056 |
6070 |
4 |
21189569 |
21192388 |
Primers |
TRINITY_DN13491_c1_g3_i8 |
Dinucleotide |
(GA)6 |
12 |
300 |
311 |
2 |
9938831 |
9943002 |
Primers |
TRINITY_DN13491_c1_g3_i8 |
Mononucleotide |
(A)10 |
10 |
5757 |
5766 |
2 |
9938831 |
9943002 |
Primers |
TRINITY_DN13491_c1_g3_i8 |
Compound |
(A)11ccatcgtgtaataaagcatttcaatccacattctccacaaaatttgacaaaaataaattt(A)12ccaaaccagatcaatcagctcaaattaaaag(A)11 |
125 |
5876 |
6000 |
2 |
9938831 |
9943002 |
Primers |
TRINITY_DN13491_c1_g3_i8 |
Mononucleotide |
(A)11 |
11 |
6130 |
6140 |
2 |
9938831 |
9943002 |
Primers |
TRINITY_DN13491_c1_g3_i8 |
Compound |
(GAA)5gcagtgaagaagaggaacactctgtcttcatgattcggatgccccattttttttcttctccttttctttctttcttcttttagtttag(T)29 |
132 |
6259 |
6390 |
2 |
9938831 |
9943002 |
Primers |
TRINITY_DN11079_c3_g2_i7 |
Dinucleotide |
(TC)19 |
38 |
164 |
201 |
5 |
7029756 |
7033415 |
Primers |
TRINITY_DN12904_c5_g1_i3 |
Mononucleotide |
(A)11 |
11 |
48 |
58 |
5 |
22407583 |
22412900 |
Primers |
TRINITY_DN12904_c5_g1_i3 |
Compound |
(T)10atacaaggttccattggatccatcaaaaactagggactacaaaaaaagcaagatgttggatggtgaattcaacgaggaccaaatgtcc(AG)13 |
124 |
511 |
634 |
5 |
22407583 |
22412900 |
Primers |
TRINITY_DN12904_c5_g1_i3 |
Mononucleotide |
(A)10 |
10 |
2875 |
2884 |
5 |
22407583 |
22412900 |
Primers |
TRINITY_DN14266_c0_g2_i4 |
Mononucleotide |
(A)11 |
11 |
2694 |
2704 |
1 |
9671157 |
9666083 |
Primers |
TRINITY_DN13300_c0_g4_i1 |
Mononucleotide |
(A)15 |
15 |
5900 |
5914 |
7 |
3522993 |
3529374 |
Primers |
TRINITY_DN13300_c0_g4_i1 |
Dinucleotide |
(TC)11 |
22 |
6244 |
6265 |
7 |
3522993 |
3529374 |
Primers |
TRINITY_DN13347_c0_g1_i11 |
Mononucleotide |
(T)10 |
10 |
485 |
494 |
1 |
4278539 |
4280498 |
Primers |
TRINITY_DN13347_c0_g1_i11 |
Mononucleotide |
(A)11 |
11 |
4106 |
4116 |
1 |
4278539 |
4280498 |
Primers |
TRINITY_DN13347_c0_g1_i11 |
Trinucleotide |
(TTC)5 |
15 |
6198 |
6212 |
1 |
4278539 |
4280498 |
Primers |
TRINITY_DN14514_c3_g1_i15 |
Mononucleotide |
(A)11 |
11 |
4001 |
4011 |
6 |
606594 |
603921 |
Primers |
TRINITY_DN12850_c0_g2_i5 |
Mononucleotide |
(A)12 |
12 |
2317 |
2328 |
3 |
15637446 |
15633907 |
Primers |
TRINITY_DN12850_c0_g2_i5 |
Trinucleotide |
(AAT)6 |
18 |
6315 |
6332 |
3 |
15637446 |
15633907 |
Primers |
TRINITY_DN12860_c1_g1_i22 |
Mononucleotide |
(A)10 |
10 |
207 |
216 |
6 |
6221387 |
6224545 |
Primers |
TRINITY_DN12860_c1_g1_i22 |
Dinucleotide |
(TC)12 |
24 |
1152 |
1175 |
6 |
6221387 |
6224545 |
Primers |
TRINITY_DN12860_c1_g1_i22 |
Mononucleotide |
(A)12 |
12 |
6036 |
6047 |
6 |
6221387 |
6224545 |
Primers |
TRINITY_DN12860_c1_g1_i22 |
Mononucleotide |
(A)12 |
12 |
6327 |
6338 |
6 |
6221387 |
6224545 |
Primers |
TRINITY_DN12562_c1_g3_i2 |
Dinucleotide |
(TG)7 |
14 |
3455 |
3468 |
4 |
1431459 |
1437443 |
Primers |
TRINITY_DN13409_c3_g1_i2 |
Dinucleotide |
(AG)8 |
16 |
2654 |
2669 |
7 |
856935 |
859741 |
Primers |
TRINITY_DN14316_c2_g1_i12 |
Mononucleotide |
(T)26 |
26 |
3498 |
3523 |
5 |
23240012 |
23238347 |
Primers |
TRINITY_DN14316_c2_g1_i12 |
Mononucleotide |
(A)10 |
10 |
3704 |
3713 |
5 |
23240012 |
23238347 |
Primers |
TRINITY_DN12196_c1_g1_i1 |
Mononucleotide |
(T)14 |
14 |
1698 |
1711 |
3 |
14882702 |
14877601 |
Primers |
TRINITY_DN12196_c1_g1_i1 |
Mononucleotide |
(A)10 |
10 |
2652 |
2661 |
3 |
14882702 |
14877601 |
Primers |
TRINITY_DN12196_c1_g1_i1 |
Dinucleotide |
(AC)6 |
12 |
4607 |
4618 |
3 |
14882702 |
14877601 |
Primers |
TRINITY_DN12196_c1_g1_i1 |
Mononucleotide |
(A)12 |
12 |
6013 |
6024 |
3 |
14882702 |
14877601 |
Primers |
TRINITY_DN12196_c1_g1_i1 |
Dinucleotide |
(TC)11 |
22 |
6250 |
6271 |
3 |
14882702 |
14877601 |
Primers |
TRINITY_DN14265_c3_g2_i12 |
Trinucleotide |
(GCA)5 |
15 |
3381 |
3395 |
4 |
21955890 |
21952026 |
Primers |
TRINITY_DN14265_c3_g2_i12 |
Mononucleotide |
(T)12 |
12 |
4127 |
4138 |
4 |
21955890 |
21952026 |
Primers |
TRINITY_DN14265_c3_g2_i12 |
Mononucleotide |
(T)11 |
11 |
4318 |
4328 |
4 |
21955890 |
21952026 |
Primers |
TRINITY_DN13420_c1_g1_i5 |
Trinucleotide |
(GCA)5 |
15 |
836 |
850 |
3 |
966303 |
971560 |
Primers |
TRINITY_DN13420_c1_g1_i5 |
Dinucleotide |
(GA)8 |
16 |
6237 |
6252 |
3 |
966303 |
971560 |
Primers |
TRINITY_DN13982_c5_g1_i1 |
Mononucleotide |
(A)10 |
10 |
85 |
94 |
1 |
3002798 |
2999858 |
Primers |
TRINITY_DN13982_c5_g1_i1 |
Mononucleotide |
(T)31 |
31 |
1425 |
1455 |
1 |
3002798 |
2999858 |
Primers |
TRINITY_DN13982_c5_g1_i1 |
Trinucleotide |
(TTA)7 |
21 |
4610 |
4630 |
1 |
3002798 |
2999858 |
Primers |
TRINITY_DN12834_c2_g1_i21 |
Mononucleotide |
(T)10 |
10 |
1060 |
1069 |
3 |
27128694 |
27130340 |
Primers |
TRINITY_DN12834_c2_g1_i21 |
Trinucleotide |
(TAA)7 |
21 |
1783 |
1803 |
3 |
27128694 |
27130340 |
Primers |
TRINITY_DN12834_c2_g1_i21 |
Trinucleotide |
(TGG)5 |
15 |
2702 |
2716 |
3 |
27128694 |
27130340 |
Primers |
TRINITY_DN12834_c2_g1_i21 |
Tetranucleotide |
(TTAA)5 |
20 |
3241 |
3260 |
3 |
27128694 |
27130340 |
Primers |
TRINITY_DN12834_c2_g1_i21 |
Mononucleotide |
(T)33 |
33 |
3532 |
3564 |
3 |
27128694 |
27130340 |
Primers |
TRINITY_DN12834_c2_g1_i21 |
Dinucleotide |
(CT)9 |
18 |
5987 |
6004 |
3 |
27128694 |
27130340 |
Primers |
TRINITY_DN12834_c2_g1_i21 |
Dinucleotide |
(CT)11 |
22 |
6230 |
6251 |
3 |
27128694 |
27130340 |
Primers |
TRINITY_DN12859_c5_g1_i22 |
Mononucleotide |
(T)13 |
13 |
173 |
185 |
6 |
3099305 |
3096723 |
Primers |
TRINITY_DN12859_c5_g1_i22 |
Compound |
(TG)9tatgtatacatgtgtattctgt(TG)6 |
52 |
2003 |
2054 |
6 |
3099305 |
3096723 |
Primers |
TRINITY_DN13162_c2_g1_i1 |
Trinucleotide |
(AAT)7 |
21 |
1 |
21 |
3 |
19931550 |
19937857 |
Primers |
TRINITY_DN12297_c2_g1_i1 |
Mononucleotide |
(T)15 |
15 |
2962 |
2976 |
6 |
20631863 |
20634843 |
Primers |
TRINITY_DN12297_c2_g1_i1 |
Mononucleotide |
(A)29 |
29 |
5999 |
6027 |
6 |
20631863 |
20634843 |
Primers |
TRINITY_DN12297_c2_g1_i1 |
Dinucleotide |
(CT)6 |
12 |
6278 |
6289 |
6 |
20631863 |
20634843 |
Primers |
TRINITY_DN12621_c0_g1_i2 |
Mononucleotide |
(A)11 |
11 |
3240 |
3250 |
1 |
6245954 |
6248332 |
Primers |
TRINITY_DN12625_c0_g3_i3 |
Mononucleotide |
(A)14 |
14 |
3213 |
3226 |
6 |
3230465 |
3228060 |
Primers |
TRINITY_DN12625_c0_g3_i3 |
Dinucleotide |
(TC)27 |
54 |
6241 |
6294 |
6 |
3230465 |
3228060 |
Primers |
TRINITY_DN12884_c1_g1_i9 |
Mononucleotide |
(A)22 |
22 |
2603 |
2624 |
3 |
6055164 |
6053373 |
Primers |
TRINITY_DN12884_c1_g1_i9 |
Mononucleotide |
(T)10 |
10 |
6249 |
6258 |
3 |
6055164 |
6053373 |
Primers |
TRINITY_DN14055_c0_g2_i7 |
Mononucleotide |
(A)10 |
10 |
4543 |
4552 |
1 |
3515739 |
3520603 |
Primers |
TRINITY_DN14055_c0_g2_i7 |
Dinucleotide |
(TC)6 |
12 |
4737 |
4748 |
1 |
3515739 |
3520603 |
Primers |
TRINITY_DN13679_c0_g1_i9 |
Dinucleotide |
(AT)8 |
16 |
3134 |
3149 |
1 |
26169091 |
26169950 |
Primers |
TRINITY_DN14133_c0_g1_i10 |
Trinucleotide |
(AGA)7 |
21 |
607 |
627 |
2 |
18700100 |
18698168 |
Primers |
TRINITY_DN14133_c0_g1_i10 |
Trinucleotide |
(AGA)16 |
48 |
6232 |
6279 |
2 |
18700100 |
18698168 |
Primers |
TRINITY_DN10455_c0_g1_i3 |
Mononucleotide |
(T)12 |
12 |
5819 |
5830 |
3 |
29665558 |
29671832 |
Primers |
TRINITY_DN13415_c0_g2_i14 |
Dinucleotide |
(GA)6 |
12 |
1 |
12 |
1 |
24360705 |
24357833 |
Primers |
TRINITY_DN13415_c0_g2_i14 |
Dinucleotide |
(TC)12 |
24 |
138 |
161 |
1 |
24360705 |
24357833 |
Primers |
TRINITY_DN13415_c0_g2_i14 |
Mononucleotide |
(T)12 |
12 |
5340 |
5351 |
1 |
24360705 |
24357833 |
Primers |
TRINITY_DN13415_c0_g2_i14 |
Mononucleotide |
(T)10 |
10 |
6215 |
6224 |
1 |
24360705 |
24357833 |
Primers |
TRINITY_DN11770_c0_g1_i2 |
Mononucleotide |
(A)11 |
11 |
1397 |
1407 |
3 |
5595009 |
5591885 |
Primers |
TRINITY_DN11770_c0_g1_i2 |
Dinucleotide |
(TC)6 |
12 |
6250 |
6261 |
3 |
5595009 |
5591885 |
Primers |
TRINITY_DN13178_c1_g1_i17 |
Mononucleotide |
(A)12 |
12 |
3764 |
3775 |
2 |
15970925 |
15965695 |
Primers |
TRINITY_DN13178_c1_g1_i17 |
Mononucleotide |
(T)11 |
11 |
4425 |
4435 |
2 |
15970925 |
15965695 |
Primers |
TRINITY_DN13178_c1_g1_i17 |
Compound |
(T)11aagaaaattgaatttgtcatcaccgtctgtagttgattaaaatatttcct(A)12 |
73 |
5083 |
5155 |
2 |
15970925 |
15965695 |
Primers |
TRINITY_DN13178_c1_g1_i17 |
Compound |
(T)11c(T)11 |
23 |
5954 |
5976 |
2 |
15970925 |
15965695 |
Primers |
TRINITY_DN12233_c6_g1_i17 |
Dinucleotide |
(GA)14 |
28 |
3828 |
3855 |
2 |
12259508 |
12261491 |
Primers |
TRINITY_DN11104_c1_g5_i2 |
Mononucleotide |
(T)11 |
11 |
266 |
276 |
3 |
37791136 |
37784872 |
Primers |
TRINITY_DN11104_c1_g5_i2 |
Dinucleotide |
(AG)12 |
24 |
5846 |
5869 |
3 |
37791136 |
37784872 |
Primers |
TRINITY_DN11910_c1_g6_i3 |
Trinucleotide |
(CTT)6 |
18 |
4513 |
4530 |
6 |
27732231 |
27734893 |
Primers |
TRINITY_DN13437_c0_g1_i18 |
Compound |
(T)11atttactttttcccttttggaaaatccgaagtgttaatttctgcaaggacagaacactctaccatttgataaccc(A)10 |
96 |
273 |
368 |
4 |
14745033 |
14743238 |
Primers |
TRINITY_DN13437_c0_g1_i18 |
Trinucleotide |
(AAT)5 |
15 |
4818 |
4832 |
4 |
14745033 |
14743238 |
Primers |
TRINITY_DN13437_c0_g1_i18 |
Mononucleotide |
(A)12 |
12 |
5232 |
5243 |
4 |
14745033 |
14743238 |
Primers |
TRINITY_DN12041_c2_g1_i9 |
Mononucleotide |
(A)11 |
11 |
4925 |
4935 |
7 |
18929830 |
18926363 |
Primers |
TRINITY_DN12041_c2_g1_i9 |
Dinucleotide |
(AT)7 |
14 |
5981 |
5994 |
7 |
18929830 |
18926363 |
Primers |
TRINITY_DN12041_c2_g1_i9 |
Dinucleotide |
(AT)6 |
12 |
6184 |
6195 |
7 |
18929830 |
18926363 |
Primers |
TRINITY_DN12071_c0_g1_i18 |
Trinucleotide |
(AAT)5 |
15 |
3277 |
3291 |
2 |
9509529 |
9511236 |
Primers |
TRINITY_DN12071_c0_g1_i18 |
Mononucleotide |
(A)10 |
10 |
3535 |
3544 |
2 |
9509529 |
9511236 |
Primers |
TRINITY_DN11650_c3_g2_i4 |
Trinucleotide |
(AAG)9 |
27 |
203 |
229 |
3 |
37733791 |
37727735 |
Primers |
TRINITY_DN11650_c3_g2_i4 |
Mononucleotide |
(A)10 |
10 |
604 |
613 |
3 |
37733791 |
37727735 |
Primers |
TRINITY_DN11650_c3_g2_i4 |
Compound |
(A)10tggttggtttagggtgttgaagcaaattaggaggttgagaagagagagtagtattgaagtat(GAA)8 |
96 |
5428 |
5523 |
3 |
37733791 |
37727735 |
Primers |
TRINITY_DN13379_c0_g2_i5 |
Mononucleotide |
(T)10 |
10 |
2220 |
2229 |
6 |
1352069 |
1353879 |
Primers |
TRINITY_DN13789_c2_g1_i11 |
Compound |
(TC)10ttccactgtgaaactcaaaaaaaagaagaaaaaaaag(A)10gg(A)10 |
79 |
1 |
79 |
2 |
3190351 |
3187997 |
Primers |
TRINITY_DN13789_c2_g1_i11 |
Mononucleotide |
(T)10 |
10 |
4142 |
4151 |
2 |
3190351 |
3187997 |
Primers |
TRINITY_DN13789_c2_g1_i11 |
Dinucleotide |
(TC)6 |
12 |
5164 |
5175 |
2 |
3190351 |
3187997 |
Primers |
TRINITY_DN11562_c0_g1_i4 |
Mononucleotide |
(A)12 |
12 |
2443 |
2454 |
7 |
18448079 |
18454330 |
Primers |
TRINITY_DN11562_c0_g1_i4 |
Mononucleotide |
(T)11 |
11 |
2700 |
2710 |
7 |
18448079 |
18454330 |
Primers |
TRINITY_DN14402_c1_g3_i3 |
Mononucleotide |
(A)16 |
16 |
4950 |
4965 |
2 |
6024409 |
6029593 |
Primers |
TRINITY_DN12558_c1_g2_i17 |
Compound |
(CTC)8gaatcctcttcacacaaaagctccacttgtttctcttcaaatccgccattttctcttcctctgtctgcg(TC)13 |
119 |
45 |
163 |
6 |
20103480 |
20108236 |
Primers |
TRINITY_DN12558_c1_g2_i17 |
Mononucleotide |
(A)11 |
11 |
1292 |
1302 |
6 |
20103480 |
20108236 |
Primers |
TRINITY_DN12558_c1_g2_i17 |
Mononucleotide |
(T)10 |
10 |
4095 |
4104 |
6 |
20103480 |
20108236 |
Primers |
TRINITY_DN12651_c1_g3_i6 |
Mononucleotide |
(T)15 |
15 |
4252 |
4266 |
2 |
15240532 |
15242904 |
Primers |
TRINITY_DN11938_c0_g1_i3 |
Dinucleotide |
(AG)15 |
30 |
6007 |
6036 |
3 |
1471825 |
1478070 |
Primers |
TRINITY_DN10457_c0_g1_i5 |
Dinucleotide |
(TC)7 |
14 |
62 |
75 |
6 |
28046817 |
28044176 |
Primers |
TRINITY_DN10457_c0_g1_i5 |
Dinucleotide |
(AT)9 |
18 |
3966 |
3983 |
6 |
28046817 |
28044176 |
Primers |
TRINITY_DN10457_c0_g1_i5 |
Mononucleotide |
(A)15 |
15 |
4789 |
4803 |
6 |
28046817 |
28044176 |
Primers |
TRINITY_DN12017_c0_g4_i3 |
Trinucleotide |
(CAT)5 |
15 |
5394 |
5408 |
4 |
356089 |
362329 |
Primers |
TRINITY_DN13442_c0_g2_i7 |
Mononucleotide |
(T)11 |
11 |
2746 |
2756 |
5 |
23740130 |
23735974 |
Primers |
TRINITY_DN13442_c0_g2_i7 |
Compound |
(T)10gtaacctacatacattcagggtagggaatgtaaataaaaatgattgaaaatcattcagctgtagaaaccaatgtttatacac(T)11 |
103 |
5921 |
6023 |
5 |
23740130 |
23735974 |
Primers |
TRINITY_DN13409_c2_g1_i3 |
Compound |
(GAA)5ggagaagaaagaaatgaaatacaataggtgagagtacgggtgtaaatgggttgggttgggttgttgggt(TA)6 |
96 |
2356 |
2451 |
5 |
6757730 |
6760141 |
Primers |
TRINITY_DN13409_c2_g1_i3 |
Trinucleotide |
(CAT)5 |
15 |
4036 |
4050 |
5 |
6757730 |
6760141 |
Primers |
TRINITY_DN14208_c0_g2_i6 |
Mononucleotide |
(T)10 |
10 |
5176 |
5185 |
1 |
21538604 |
21540468 |
Primers |
TRINITY_DN13923_c0_g1_i11 |
Compound |
(T)19cc(T)27gccctaaaatgagaaaag(A)10 |
76 |
7 |
82 |
3 |
17134276 |
17132691 |
Primers |
TRINITY_DN13923_c0_g1_i11 |
Tetranucleotide |
(TTCC)11 |
44 |
1788 |
1831 |
3 |
17134276 |
17132691 |
Primers |
TRINITY_DN13923_c0_g1_i11 |
Mononucleotide |
(T)12 |
12 |
5612 |
5623 |
3 |
17134276 |
17132691 |
Primers |
TRINITY_DN13411_c2_g2_i7 |
Compound |
(TC)8(TA)7 |
30 |
46 |
75 |
1 |
19192707 |
19195159 |
Primers |
TRINITY_DN13411_c2_g2_i7 |
Mononucleotide |
(T)14 |
14 |
4218 |
4231 |
1 |
19192707 |
19195159 |
Primers |
TRINITY_DN13411_c2_g2_i7 |
Dinucleotide |
(TA)9 |
18 |
4929 |
4946 |
1 |
19192707 |
19195159 |
Primers |
TRINITY_DN13411_c2_g2_i7 |
Mononucleotide |
(T)10 |
10 |
6140 |
6149 |
1 |
19192707 |
19195159 |
Primers |
TRINITY_DN13464_c0_g1_i10 |
Mononucleotide |
(T)10 |
10 |
270 |
279 |
5 |
4637650 |
4631710 |
Primers |
TRINITY_DN13464_c0_g1_i10 |
Tetranucleotide |
(ATTC)5 |
20 |
424 |
443 |
5 |
4637650 |
4631710 |
Primers |
TRINITY_DN13464_c0_g1_i10 |
Mononucleotide |
(T)10 |
10 |
2172 |
2181 |
5 |
4637650 |
4631710 |
Primers |
TRINITY_DN13464_c0_g1_i10 |
Mononucleotide |
(A)12 |
12 |
2719 |
2730 |
5 |
4637650 |
4631710 |
Primers |
TRINITY_DN13464_c0_g1_i10 |
Mononucleotide |
(T)11 |
11 |
4955 |
4965 |
5 |
4637650 |
4631710 |
Primers |
TRINITY_DN9636_c0_g1_i2 |
Dinucleotide |
(CA)6 |
12 |
6014 |
6025 |
1 |
5724299 |
5721725 |
Primers |
TRINITY_DN12808_c1_g3_i1 |
Trinucleotide |
(GAA)5 |
15 |
6154 |
6168 |
6 |
8956590 |
8962804 |
Primers |
TRINITY_DN13293_c1_g1_i3 |
Dinucleotide |
(CT)8 |
16 |
343 |
358 |
4 |
1559096 |
1563368 |
Primers |
TRINITY_DN13474_c1_g1_i6 |
Mononucleotide |
(T)20 |
20 |
24 |
43 |
2 |
18372417 |
18367276 |
Primers |
TRINITY_DN13474_c1_g1_i6 |
Compound |
(TTA)6atactactattacttgtacataagggggagcgtctcttggcagtcgcttctactcagtttttctcaattcttcttgttttcc(T)10 |
110 |
4558 |
4667 |
2 |
18372417 |
18367276 |
Primers |
TRINITY_DN13474_c1_g1_i6 |
Mononucleotide |
(A)12 |
12 |
5867 |
5878 |
2 |
18372417 |
18367276 |
Primers |
TRINITY_DN13004_c0_g1_i12 |
Dinucleotide |
(GA)7 |
14 |
107 |
120 |
3 |
26237487 |
26235452 |
Primers |
TRINITY_DN13004_c0_g1_i12 |
Mononucleotide |
(T)13 |
13 |
314 |
326 |
3 |
26237487 |
26235452 |
Primers |
TRINITY_DN13004_c0_g1_i12 |
Mononucleotide |
(T)10 |
10 |
5481 |
5490 |
3 |
26237487 |
26235452 |
Primers |
TRINITY_DN12860_c1_g3_i23 |
Mononucleotide |
(T)10 |
10 |
1655 |
1664 |
2 |
19678912 |
19673846 |
Primers |
TRINITY_DN12860_c1_g3_i23 |
Mononucleotide |
(A)10 |
10 |
2530 |
2539 |
2 |
19678912 |
19673846 |
Primers |
TRINITY_DN12860_c1_g3_i23 |
Mononucleotide |
(A)11 |
11 |
3736 |
3746 |
2 |
19678912 |
19673846 |
Primers |
TRINITY_DN12210_c1_g1_i14 |
Mononucleotide |
(T)21 |
21 |
359 |
379 |
5 |
6402418 |
6400391 |
Primers |
TRINITY_DN12210_c1_g1_i14 |
Dinucleotide |
(AT)8 |
16 |
5887 |
5902 |
5 |
6402418 |
6400391 |
Primers |
TRINITY_DN12210_c1_g1_i14 |
Dinucleotide |
(AG)6 |
12 |
6163 |
6174 |
5 |
6402418 |
6400391 |
Primers |
TRINITY_DN13591_c1_g1_i19 |
Mononucleotide |
(A)10 |
10 |
3165 |
3174 |
4 |
23080387 |
23083261 |
Primers |
TRINITY_DN12069_c0_g1_i17 |
Mononucleotide |
(T)15 |
15 |
23 |
37 |
4 |
22965555 |
22970186 |
Primers |
TRINITY_DN12069_c0_g1_i17 |
Mononucleotide |
(A)13 |
13 |
3624 |
3636 |
4 |
22965555 |
22970186 |
Primers |
TRINITY_DN12069_c0_g1_i17 |
Dinucleotide |
(AT)6 |
12 |
4341 |
4352 |
4 |
22965555 |
22970186 |
Primers |
TRINITY_DN10793_c1_g1_i2 |
Trinucleotide |
(ATC)5 |
15 |
1116 |
1130 |
4 |
20890571 |
20892392 |
Primers |
TRINITY_DN10793_c1_g1_i2 |
Mononucleotide |
(A)11 |
11 |
5355 |
5365 |
4 |
20890571 |
20892392 |
Primers |
TRINITY_DN10793_c1_g1_i2 |
Dinucleotide |
(AG)10 |
20 |
5496 |
5515 |
4 |
20890571 |
20892392 |
Primers |
TRINITY_DN10793_c1_g1_i2 |
Mononucleotide |
(A)10 |
10 |
6010 |
6019 |
4 |
20890571 |
20892392 |
Primers |
TRINITY_DN13690_c1_g1_i8 |
Trinucleotide |
(TTC)6 |
18 |
47 |
64 |
6 |
22220681 |
22218614 |
Primers |
TRINITY_DN13690_c1_g1_i8 |
Mononucleotide |
(T)12 |
12 |
4323 |
4334 |
6 |
22220681 |
22218614 |
Primers |
TRINITY_DN13092_c1_g6_i7 |
Compound |
(CA)7(CT)9 |
32 |
98 |
129 |
4 |
17705566 |
17700452 |
Primers |
TRINITY_DN12651_c1_g2_i6 |
Dinucleotide |
(GA)6 |
12 |
5850 |
5861 |
3 |
6169024 |
6174431 |
Primers |
TRINITY_DN13793_c0_g3_i4 |
Dinucleotide |
(AG)7 |
14 |
2343 |
2356 |
1 |
21669795 |
21665291 |
Primers |
TRINITY_DN13793_c0_g3_i4 |
Dinucleotide |
(AG)7 |
14 |
3387 |
3400 |
1 |
21669795 |
21665291 |
Primers |
TRINITY_DN13793_c0_g3_i4 |
Mononucleotide |
(A)10 |
10 |
5441 |
5450 |
1 |
21669795 |
21665291 |
Primers |
TRINITY_DN13793_c0_g3_i4 |
Mononucleotide |
(G)10 |
10 |
6068 |
6077 |
1 |
21669795 |
21665291 |
Primers |
TRINITY_DN13493_c2_g8_i2 |
Mononucleotide |
(A)10 |
10 |
4178 |
4187 |
5 |
14249635 |
14255845 |
Primers |
TRINITY_DN13493_c2_g8_i2 |
Dinucleotide |
(GA)7 |
14 |
5809 |
5822 |
5 |
14249635 |
14255845 |
Primers |
TRINITY_DN13493_c2_g8_i2 |
Tetranucleotide |
(TTCT)6 |
24 |
6090 |
6113 |
5 |
14249635 |
14255845 |
Primers |
TRINITY_DN14458_c7_g1_i14 |
Dinucleotide |
(TC)6 |
12 |
269 |
280 |
4 |
5361988 |
5357638 |
Primers |
TRINITY_DN14458_c7_g1_i14 |
Dinucleotide |
(CA)8 |
16 |
2179 |
2194 |
4 |
5361988 |
5357638 |
Primers |
TRINITY_DN14458_c7_g1_i14 |
Mononucleotide |
(A)10 |
10 |
5388 |
5397 |
4 |
5361988 |
5357638 |
Primers |
TRINITY_DN13668_c0_g1_i15 |
Mononucleotide |
(T)15 |
15 |
809 |
823 |
2 |
18609651 |
18608090 |
Primers |
TRINITY_DN13786_c1_g1_i7 |
Trinucleotide |
(GAA)5 |
15 |
1068 |
1082 |
5 |
3220446 |
3223028 |
Primers |
TRINITY_DN13786_c1_g1_i7 |
Mononucleotide |
(A)13 |
13 |
6039 |
6051 |
5 |
3220446 |
3223028 |
Primers |
TRINITY_DN12011_c2_g1_i12 |
Dinucleotide |
(TA)6 |
12 |
263 |
274 |
3 |
7304958 |
7307624 |
Primers |
TRINITY_DN12011_c2_g1_i12 |
Mononucleotide |
(T)15 |
15 |
824 |
838 |
3 |
7304958 |
7307624 |
Primers |
TRINITY_DN12011_c2_g1_i12 |
Mononucleotide |
(A)10 |
10 |
5751 |
5760 |
3 |
7304958 |
7307624 |
Primers |
TRINITY_DN12011_c2_g1_i12 |
Mononucleotide |
(A)11 |
11 |
5967 |
5977 |
3 |
7304958 |
7307624 |
Primers |
TRINITY_DN12011_c2_g1_i12 |
Dinucleotide |
(GA)6 |
12 |
6166 |
6177 |
3 |
7304958 |
7307624 |
Primers |
TRINITY_DN14161_c1_g1_i13 |
Trinucleotide |
(TTC)7 |
21 |
83 |
103 |
5 |
22294543 |
22293113 |
Primers |
TRINITY_DN14161_c1_g1_i13 |
Mononucleotide |
(T)10 |
10 |
2742 |
2751 |
5 |
22294543 |
22293113 |
Primers |
TRINITY_DN14161_c1_g1_i13 |
Mononucleotide |
(T)11 |
11 |
2940 |
2950 |
5 |
22294543 |
22293113 |
Primers |
TRINITY_DN11609_c0_g2_i3 |
Trinucleotide |
(TGC)8 |
24 |
62 |
85 |
5 |
12793584 |
12799150 |
Primers |
TRINITY_DN11609_c0_g2_i3 |
Mononucleotide |
(A)12 |
12 |
1324 |
1335 |
5 |
12793584 |
12799150 |
Primers |
TRINITY_DN11609_c0_g2_i3 |
Mononucleotide |
(A)10 |
10 |
3462 |
3471 |
5 |
12793584 |
12799150 |
Primers |
TRINITY_DN12810_c0_g1_i5 |
Mononucleotide |
(A)10 |
10 |
5791 |
5800 |
3 |
9645743 |
9647402 |
Primers |
TRINITY_DN11548_c0_g2_i11 |
Mononucleotide |
(T)10 |
10 |
241 |
250 |
3 |
39637968 |
39632573 |
Primers |
TRINITY_DN11548_c0_g2_i11 |
Dinucleotide |
(CA)6 |
12 |
4874 |
4885 |
3 |
39637968 |
39632573 |
Primers |
TRINITY_DN10135_c0_g1_i8 |
Dinucleotide |
(AT)6 |
12 |
3672 |
3683 |
5 |
23604896 |
23611065 |
Primers |
TRINITY_DN13885_c1_g2_i4 |
Mononucleotide |
(A)10 |
10 |
3600 |
3609 |
4 |
14701053 |
14694889 |
Primers |
TRINITY_DN13885_c1_g2_i4 |
Mononucleotide |
(A)13 |
13 |
5906 |
5918 |
4 |
14701053 |
14694889 |
Primers |
TRINITY_DN11937_c0_g2_i1 |
Mononucleotide |
(A)10 |
10 |
5316 |
5325 |
2 |
8349367 |
8345763 |
Primers |
TRINITY_DN13576_c4_g1_i18 |
Mononucleotide |
(T)13 |
13 |
345 |
357 |
1 |
10154072 |
10155519 |
Primers |
TRINITY_DN13027_c0_g2_i7 |
Mononucleotide |
(A)23 |
23 |
1199 |
1221 |
4 |
22898124 |
22900051 |
Primers |
TRINITY_DN13027_c0_g2_i7 |
Trinucleotide |
(ACC)6 |
18 |
1949 |
1966 |
4 |
22898124 |
22900051 |
Primers |
TRINITY_DN11425_c3_g1_i2 |
Mononucleotide |
(A)10 |
10 |
2925 |
2934 |
1 |
15787624 |
15793772 |
Primers |
TRINITY_DN11425_c3_g1_i2 |
Trinucleotide |
(AGA)6 |
18 |
6002 |
6019 |
1 |
15787624 |
15793772 |
Primers |
TRINITY_DN13394_c3_g3_i11 |
Mononucleotide |
(A)12 |
12 |
332 |
343 |
4 |
19672843 |
19669516 |
Primers |
TRINITY_DN12481_c0_g2_i3 |
Mononucleotide |
(T)18 |
18 |
580 |
597 |
2 |
18942144 |
18938717 |
Primers |
TRINITY_DN13755_c1_g7_i9 |
Compound |
(TC)9c(CT)8 |
35 |
48 |
82 |
3 |
2338556 |
2335285 |
Primers |
TRINITY_DN13755_c1_g7_i9 |
Dinucleotide |
(AT)7 |
14 |
6122 |
6135 |
3 |
2338556 |
2335285 |
Primers |
TRINITY_DN13082_c2_g1_i14 |
Dinucleotide |
(CT)8 |
16 |
4107 |
4122 |
1 |
1306188 |
1303546 |
Primers |
TRINITY_DN13082_c2_g1_i14 |
Mononucleotide |
(A)10 |
10 |
6022 |
6031 |
1 |
1306188 |
1303546 |
Primers |
TRINITY_DN11476_c0_g1_i5 |
Dinucleotide |
(GA)7 |
14 |
1230 |
1243 |
6 |
28829168 |
28826490 |
Primers |
TRINITY_DN11476_c0_g1_i5 |
Mononucleotide |
(A)10 |
10 |
3866 |
3875 |
6 |
28829168 |
28826490 |
Primers |
TRINITY_DN12666_c1_g1_i5 |
Mononucleotide |
(A)11 |
11 |
5759 |
5769 |
1 |
11127353 |
11132165 |
Primers |
TRINITY_DN12666_c1_g1_i5 |
Trinucleotide |
(GAG)8 |
24 |
5998 |
6021 |
1 |
11127353 |
11132165 |
Primers |
TRINITY_DN14647_c1_g1_i9 |
Mononucleotide |
(T)10 |
10 |
4722 |
4731 |
7 |
5928232 |
5931803 |
Primers |
TRINITY_DN14045_c1_g1_i1 |
Dinucleotide |
(TA)9 |
18 |
4908 |
4925 |
7 |
5089133 |
5092271 |
Primers |
TRINITY_DN12902_c1_g1_i7 |
Mononucleotide |
(T)11 |
11 |
202 |
212 |
4 |
12549222 |
12551687 |
Primers |
TRINITY_DN12004_c2_g2_i15 |
Mononucleotide |
(A)12 |
12 |
3032 |
3043 |
4 |
22756304 |
22754588 |
Primers |
TRINITY_DN11883_c0_g1_i10 |
Dinucleotide |
(GC)6 |
12 |
244 |
255 |
6 |
118916 |
121022 |
Primers |
TRINITY_DN13793_c0_g1_i2 |
Dinucleotide |
(AC)7 |
14 |
2311 |
2324 |
1 |
3125236 |
3128005 |
Primers |
TRINITY_DN13793_c0_g1_i2 |
Mononucleotide |
(A)10 |
10 |
3181 |
3190 |
1 |
3125236 |
3128005 |
Primers |
TRINITY_DN14477_c0_g2_i14 |
Compound |
(T)24aaaaaaaaagggggtaaaaaaggga(T)16 |
65 |
28 |
92 |
6 |
20464630 |
20467666 |
Primers |
TRINITY_DN14477_c0_g2_i14 |
Trinucleotide |
(ATT)5 |
15 |
931 |
945 |
6 |
20464630 |
20467666 |
Primers |
TRINITY_DN14477_c0_g2_i14 |
Mononucleotide |
(A)11 |
11 |
6058 |
6068 |
6 |
20464630 |
20467666 |
Primers |
TRINITY_DN14501_c0_g3_i6 |
Dinucleotide |
(TA)6 |
12 |
897 |
908 |
7 |
16903372 |
16907130 |
Primers |
TRINITY_DN14255_c0_g2_i5 |
Mononucleotide |
(A)12 |
12 |
2892 |
2903 |
5 |
21327633 |
21331305 |
Primers |
TRINITY_DN12885_c1_g1_i1 |
Mononucleotide |
(T)10 |
10 |
2738 |
2747 |
5 |
22947648 |
22950515 |
Primers |
TRINITY_DN12885_c1_g1_i1 |
Mononucleotide |
(A)11 |
11 |
5739 |
5749 |
5 |
22947648 |
22950515 |
Primers |
TRINITY_DN12885_c1_g1_i1 |
Trinucleotide |
(GAA)5 |
15 |
5893 |
5907 |
5 |
22947648 |
22950515 |
Primers |
TRINITY_DN12740_c4_g2_i8 |
Mononucleotide |
(T)11 |
11 |
4515 |
4525 |
3 |
14747063 |
14749239 |
Primers |
TRINITY_DN13663_c2_g1_i2 |
Mononucleotide |
(T)14 |
14 |
1128 |
1141 |
1 |
22036917 |
22034037 |
Primers |
TRINITY_DN13663_c2_g1_i2 |
Mononucleotide |
(T)10 |
10 |
1404 |
1413 |
1 |
22036917 |
22034037 |
Primers |
TRINITY_DN13663_c2_g1_i2 |
Mononucleotide |
(A)11 |
11 |
3423 |
3433 |
1 |
22036917 |
22034037 |
Primers |
TRINITY_DN13663_c2_g1_i2 |
Mononucleotide |
(A)11 |
11 |
4855 |
4865 |
1 |
22036917 |
22034037 |
Primers |
TRINITY_DN12122_c0_g2_i5 |
Dinucleotide |
(TG)9 |
18 |
1759 |
1776 |
6 |
28906045 |
28902974 |
Primers |
TRINITY_DN12122_c0_g2_i5 |
Mononucleotide |
(T)11 |
11 |
3062 |
3072 |
6 |
28906045 |
28902974 |
Primers |
TRINITY_DN14551_c0_g4_i6 |
Mononucleotide |
(T)20 |
20 |
1055 |
1074 |
1 |
1088799 |
1093062 |
Primers |
TRINITY_DN14551_c0_g4_i6 |
Mononucleotide |
(T)10 |
10 |
3041 |
3050 |
1 |
1088799 |
1093062 |
Primers |
TRINITY_DN14551_c0_g4_i6 |
Trinucleotide |
(TGC)6 |
18 |
5911 |
5928 |
1 |
1088799 |
1093062 |
Primers |
TRINITY_DN11317_c0_g7_i2 |
Trinucleotide |
(GCC)5 |
15 |
5902 |
5916 |
3 |
9457820 |
9454421 |
Primers |
TRINITY_DN14177_c0_g1_i33 |
Trinucleotide |
(TTC)10 |
30 |
296 |
325 |
3 |
12559891 |
12558654 |
Primers |
TRINITY_DN12665_c1_g2_i9 |
Mononucleotide |
(T)13 |
13 |
4435 |
4447 |
6 |
18864696 |
18866708 |
Primers |
TRINITY_DN10358_c0_g1_i7 |
Mononucleotide |
(T)14 |
14 |
716 |
729 |
1 |
4956626 |
4950530 |
Primers |
TRINITY_DN10358_c0_g1_i7 |
Mononucleotide |
(T)10 |
10 |
2688 |
2697 |
1 |
4956626 |
4950530 |
Primers |
TRINITY_DN12351_c1_g2_i10 |
Dinucleotide |
(TC)12 |
24 |
48 |
71 |
6 |
3910017 |
3913895 |
Primers |
TRINITY_DN12351_c1_g2_i10 |
Compound |
(TCTT)9tatcctc(T)10c(T)24 |
78 |
2154 |
2231 |
6 |
3910017 |
3913895 |
Primers |
TRINITY_DN12351_c1_g2_i10 |
Mononucleotide |
(T)10 |
10 |
2857 |
2866 |
6 |
3910017 |
3913895 |
Primers |
TRINITY_DN12351_c1_g2_i10 |
Trinucleotide |
(GTA)7 |
21 |
5601 |
5621 |
6 |
3910017 |
3913895 |
Primers |
TRINITY_DN12351_c1_g2_i10 |
Mononucleotide |
(A)13 |
13 |
6056 |
6068 |
6 |
3910017 |
3913895 |
Primers |
TRINITY_DN12641_c5_g2_i5 |
Mononucleotide |
(T)10 |
10 |
738 |
747 |
4 |
1266000 |
1272088 |
Primers |
TRINITY_DN13548_c0_g1_i15 |
Mononucleotide |
(A)16 |
16 |
1749 |
1764 |
1 |
10252886 |
10251247 |
Primers |
TRINITY_DN13548_c0_g1_i15 |
Trinucleotide |
(AAG)19 |
57 |
4077 |
4133 |
1 |
10252886 |
10251247 |
Primers |
TRINITY_DN14406_c0_g1_i4 |
Dinucleotide |
(AG)6 |
12 |
5888 |
5899 |
6 |
20994530 |
20996851 |
Primers |
TRINITY_DN13642_c3_g1_i12 |
Mononucleotide |
(A)10 |
10 |
1836 |
1845 |
3 |
35581699 |
35583267 |
Primers |
TRINITY_DN13642_c3_g1_i12 |
Mononucleotide |
(A)10 |
10 |
3126 |
3135 |
3 |
35581699 |
35583267 |
Primers |
TRINITY_DN13642_c3_g1_i12 |
Dinucleotide |
(AG)7 |
14 |
6033 |
6046 |
3 |
35581699 |
35583267 |
Primers |
TRINITY_DN12208_c1_g1_i7 |
Mononucleotide |
(A)12 |
12 |
3175 |
3186 |
5 |
23489601 |
23493814 |
Primers |
TRINITY_DN12208_c1_g1_i7 |
Compound |
(GA)9aagagaaagagaaca(AG)6 |
45 |
6004 |
6048 |
5 |
23489601 |
23493814 |
Primers |
TRINITY_DN13235_c1_g2_i3 |
Mononucleotide |
(T)12 |
12 |
88 |
99 |
2 |
915383 |
910779 |
Primers |
TRINITY_DN13235_c1_g2_i3 |
Trinucleotide |
(AAG)5 |
15 |
279 |
293 |
2 |
915383 |
910779 |
Primers |
TRINITY_DN13235_c1_g2_i3 |
Mononucleotide |
(A)10 |
10 |
1711 |
1720 |
2 |
915383 |
910779 |
Primers |
TRINITY_DN13235_c1_g2_i3 |
Mononucleotide |
(T)11 |
11 |
2396 |
2406 |
2 |
915383 |
910779 |
Primers |
TRINITY_DN13235_c1_g2_i3 |
Mononucleotide |
(T)10 |
10 |
2614 |
2623 |
2 |
915383 |
910779 |
Primers |
TRINITY_DN13235_c1_g2_i3 |
Trinucleotide |
(AAT)5 |
15 |
5368 |
5382 |
2 |
915383 |
910779 |
Primers |
TRINITY_DN12248_c1_g2_i4 |
Dinucleotide |
(TA)7 |
14 |
2632 |
2645 |
1 |
25494020 |
25489903 |
Primers |
TRINITY_DN12248_c1_g2_i4 |
Dinucleotide |
(AG)6 |
12 |
5760 |
5771 |
1 |
25494020 |
25489903 |
Primers |
TRINITY_DN12866_c2_g1_i5 |
Trinucleotide |
(AAT)5 |
15 |
874 |
888 |
6 |
9173107 |
9171548 |
Primers |
TRINITY_DN12866_c2_g1_i5 |
Mononucleotide |
(A)11 |
11 |
1823 |
1833 |
6 |
9173107 |
9171548 |
Primers |
TRINITY_DN12866_c2_g1_i5 |
Mononucleotide |
(T)12 |
12 |
2497 |
2508 |
6 |
9173107 |
9171548 |
Primers |
TRINITY_DN12674_c2_g1_i27 |
Mononucleotide |
(T)16 |
16 |
4327 |
4342 |
6 |
27961502 |
27963914 |
Primers |
TRINITY_DN12674_c2_g1_i27 |
Dinucleotide |
(TC)8 |
16 |
4774 |
4789 |
6 |
27961502 |
27963914 |
Primers |
TRINITY_DN14373_c2_g2_i23 |
Mononucleotide |
(T)11 |
11 |
3902 |
3912 |
6 |
6960645 |
6961804 |
Primers |
TRINITY_DN12823_c4_g3_i27 |
Dinucleotide |
(TC)8 |
16 |
1 |
16 |
6 |
22555099 |
22556753 |
Primers |
TRINITY_DN12095_c1_g4_i5 |
Tetranucleotide |
(CTTT)5 |
20 |
91 |
110 |
3 |
27312535 |
27316335 |
Primers |
TRINITY_DN12095_c1_g4_i5 |
Mononucleotide |
(T)16 |
16 |
3522 |
3537 |
3 |
27312535 |
27316335 |
Primers |
TRINITY_DN12697_c0_g1_i3 |
Mononucleotide |
(A)10 |
10 |
54 |
63 |
7 |
3854294 |
3850691 |
Primers |
TRINITY_DN12697_c0_g1_i3 |
Mononucleotide |
(T)10 |
10 |
1449 |
1458 |
7 |
3854294 |
3850691 |
Primers |
TRINITY_DN14038_c0_g2_i19 |
Mononucleotide |
(T)10 |
10 |
1382 |
1391 |
3 |
36067688 |
36069984 |
Primers |
TRINITY_DN14038_c0_g2_i19 |
Compound |
(AT)7acac(AT)6 |
30 |
4346 |
4375 |
3 |
36067688 |
36069984 |
Primers |
TRINITY_DN12839_c1_g2_i5 |
Trinucleotide |
(TTA)6 |
18 |
711 |
728 |
6 |
26184558 |
26182273 |
Primers |
TRINITY_DN12839_c1_g2_i5 |
Mononucleotide |
(T)11 |
11 |
1456 |
1466 |
6 |
26184558 |
26182273 |
Primers |
TRINITY_DN12839_c1_g2_i5 |
Mononucleotide |
(T)10 |
10 |
2000 |
2009 |
6 |
26184558 |
26182273 |
Primers |
TRINITY_DN12839_c1_g2_i5 |
Mononucleotide |
(T)15 |
15 |
5883 |
5897 |
6 |
26184558 |
26182273 |
Primers |
TRINITY_DN12608_c6_g1_i21 |
Dinucleotide |
(AC)6 |
12 |
3629 |
3640 |
4 |
23218465 |
23212455 |
Primers |
TRINITY_DN12608_c6_g1_i21 |
Mononucleotide |
(A)15 |
15 |
4869 |
4883 |
4 |
23218465 |
23212455 |
Primers |
TRINITY_DN12608_c6_g1_i21 |
Trinucleotide |
(AAG)6 |
18 |
5513 |
5530 |
4 |
23218465 |
23212455 |
Primers |
TRINITY_DN12608_c6_g1_i21 |
Dinucleotide |
(AG)7 |
14 |
5876 |
5889 |
4 |
23218465 |
23212455 |
Primers |
TRINITY_DN12094_c2_g2_i31 |
Trinucleotide |
(TTC)8 |
24 |
159 |
182 |
3 |
254031 |
250425 |
Primers |
TRINITY_DN12094_c2_g2_i31 |
Mononucleotide |
(A)10 |
10 |
3020 |
3029 |
3 |
254031 |
250425 |
Primers |
TRINITY_DN12474_c4_g3_i8 |
Dinucleotide |
(CT)7 |
14 |
33 |
46 |
7 |
9148681 |
9142726 |
Primers |
TRINITY_DN12474_c4_g3_i8 |
Mononucleotide |
(A)10 |
10 |
4491 |
4500 |
7 |
9148681 |
9142726 |
Primers |
TRINITY_DN12474_c4_g3_i8 |
Mononucleotide |
(A)13 |
13 |
5776 |
5788 |
7 |
9148681 |
9142726 |
Primers |
TRINITY_DN11335_c0_g1_i3 |
Mononucleotide |
(A)10 |
10 |
5960 |
5969 |
4 |
19900661 |
19905406 |
Primers |
TRINITY_DN13668_c0_g2_i25 |
Mononucleotide |
(A)13 |
13 |
4502 |
4514 |
2 |
369558 |
367229 |
Primers |
TRINITY_DN13668_c0_g2_i25 |
Mononucleotide |
(A)11 |
11 |
6030 |
6040 |
2 |
369558 |
367229 |
Primers |
TRINITY_DN13547_c4_g1_i1 |
Compound |
(A)10gtaattgtgagtagtagagagtagcccctcggtttccagtgggtttcagagctcaaaaagcttgctgtataagcaaacc(T)11 |
100 |
31 |
130 |
3 |
38000756 |
38003472 |
Primers |
TRINITY_DN12645_c3_g4_i7 |
Compound |
(A)18cgttgttttcacttttaaaaaacccctaaaaagcacatacatagaatgtacacatgaaatgacccattgaaacacataatggtgccctcttaaattc(AGA)6 |
133 |
1765 |
1897 |
4 |
13797608 |
13791942 |
Primers |
TRINITY_DN12645_c3_g4_i7 |
Trinucleotide |
(AGA)8 |
24 |
5640 |
5663 |
4 |
13797608 |
13791942 |
Primers |
TRINITY_DN12728_c3_g2_i9 |
Compound |
(TTTC)5(T)21 |
41 |
5549 |
5589 |
4 |
19109655 |
19111943 |
Primers |
TRINITY_DN12038_c0_g1_i16 |
Dinucleotide |
(AC)7 |
14 |
2926 |
2939 |
4 |
19619786 |
19621964 |
Primers |
TRINITY_DN12038_c0_g1_i16 |
Mononucleotide |
(A)11 |
11 |
4664 |
4674 |
4 |
19619786 |
19621964 |
Primers |
TRINITY_DN13501_c1_g4_i9 |
Mononucleotide |
(T)11 |
11 |
669 |
679 |
4 |
4208887 |
4204336 |
Primers |
TRINITY_DN13501_c1_g4_i9 |
Mononucleotide |
(A)10 |
10 |
5406 |
5415 |
4 |
4208887 |
4204336 |
Primers |
TRINITY_DN13501_c1_g4_i9 |
Compound |
(A)10gaaaaaaccatcgaaaaatcgatatatcatgaacctcgatccaaacacaacgatccgatcaaccagaaaattccagggataaaacg(A)15 |
111 |
5673 |
5783 |
4 |
4208887 |
4204336 |
Primers |
TRINITY_DN13501_c1_g4_i9 |
Dinucleotide |
(GA)20 |
40 |
5911 |
5950 |
4 |
4208887 |
4204336 |
Primers |
TRINITY_DN13431_c3_g1_i5 |
Mononucleotide |
(T)11 |
11 |
2186 |
2196 |
6 |
2335936 |
2333915 |
Primers |
TRINITY_DN13431_c3_g1_i5 |
Mononucleotide |
(A)10 |
10 |
4479 |
4488 |
6 |
2335936 |
2333915 |
Primers |
TRINITY_DN12495_c4_g2_i2 |
Compound |
(AAG)6aatt(GGA)5 |
37 |
49 |
85 |
1 |
7716024 |
7722034 |
Primers |
TRINITY_DN12495_c4_g2_i2 |
Compound |
(CCT)5cg(CT)7 |
31 |
271 |
301 |
1 |
7716024 |
7722034 |
Primers |
TRINITY_DN14090_c1_g1_i12 |
Mononucleotide |
(A)15 |
15 |
2931 |
2945 |
1 |
16987130 |
16990217 |
Primers |
TRINITY_DN11670_c0_g3_i17 |
Mononucleotide |
(T)10 |
10 |
118 |
127 |
1 |
12775024 |
12769794 |
Primers |
TRINITY_DN11670_c0_g3_i17 |
Dinucleotide |
(TC)16 |
32 |
775 |
806 |
1 |
12775024 |
12769794 |
Primers |
TRINITY_DN11670_c0_g3_i17 |
Mononucleotide |
(T)12 |
12 |
1505 |
1516 |
1 |
12775024 |
12769794 |
Primers |
TRINITY_DN11670_c0_g3_i17 |
Mononucleotide |
(A)12 |
12 |
5027 |
5038 |
1 |
12775024 |
12769794 |
Primers |
TRINITY_DN12714_c0_g1_i1 |
Trinucleotide |
(GAA)6 |
18 |
5786 |
5803 |
5 |
374252 |
375551 |
Primers |
TRINITY_DN12293_c0_g1_i5 |
Trinucleotide |
(AAC)5 |
15 |
194 |
208 |
6 |
26207974 |
26205726 |
Primers |
TRINITY_DN13084_c1_g4_i11 |
Trinucleotide |
(GAA)5 |
15 |
3889 |
3903 |
6 |
146891 |
145117 |
Primers |
TRINITY_DN13152_c4_g1_i5 |
Mononucleotide |
(T)11 |
11 |
3411 |
3421 |
4 |
20132954 |
20126955 |
Primers |
TRINITY_DN14549_c0_g1_i26 |
Trinucleotide |
(ATA)5 |
15 |
415 |
429 |
2 |
5178677 |
5180252 |
Primers |
TRINITY_DN14549_c0_g1_i26 |
Mononucleotide |
(T)10 |
10 |
5081 |
5090 |
2 |
5178677 |
5180252 |
Primers |
TRINITY_DN14549_c0_g1_i26 |
Mononucleotide |
(T)10 |
10 |
5817 |
5826 |
2 |
5178677 |
5180252 |
Primers |
TRINITY_DN14067_c2_g3_i4 |
Dinucleotide |
(TA)8 |
16 |
477 |
492 |
3 |
25794282 |
25800287 |
Primers |
TRINITY_DN14067_c2_g3_i4 |
Mononucleotide |
(A)13 |
13 |
1526 |
1538 |
3 |
25794282 |
25800287 |
Primers |
TRINITY_DN14067_c2_g3_i4 |
Mononucleotide |
(T)14 |
14 |
2578 |
2591 |
3 |
25794282 |
25800287 |
Primers |
TRINITY_DN12761_c1_g1_i10 |
Mononucleotide |
(T)11 |
11 |
1800 |
1810 |
4 |
18264174 |
18267984 |
Primers |
TRINITY_DN12761_c1_g1_i10 |
Mononucleotide |
(A)10 |
10 |
2625 |
2634 |
4 |
18264174 |
18267984 |
Primers |
TRINITY_DN12761_c1_g1_i10 |
Mononucleotide |
(A)11 |
11 |
3213 |
3223 |
4 |
18264174 |
18267984 |
Primers |
TRINITY_DN12761_c1_g1_i10 |
Trinucleotide |
(ATG)5 |
15 |
4564 |
4578 |
4 |
18264174 |
18267984 |
Primers |
TRINITY_DN12761_c1_g1_i10 |
Mononucleotide |
(A)10 |
10 |
5556 |
5565 |
4 |
18264174 |
18267984 |
Primers |
TRINITY_DN12761_c1_g1_i10 |
Compound* |
(AAG)6(AG)14* |
44 |
5878 |
5921 |
4 |
18264174 |
18267984 |
Primers |
TRINITY_DN14431_c0_g1_i6 |
Mononucleotide |
(A)16 |
16 |
2609 |
2624 |
6 |
27716462 |
27714203 |
Primers |
TRINITY_DN14431_c0_g1_i6 |
Compound* |
(CTT)12(T)13* |
47 |
5893 |
5939 |
6 |
27716462 |
27714203 |
Primers |
TRINITY_DN14705_c3_g2_i1 |
Mononucleotide |
(A)10 |
10 |
2784 |
2793 |
1 |
3077713 |
3078269 |
Primers |
TRINITY_DN14705_c3_g2_i1 |
Compound |
(T)10atcaaagcaattagtggaattttcctaatgttttgagcagataaatatgaaattccttttcctttttgtaggctatgt(A)12 |
100 |
5690 |
5789 |
1 |
3077713 |
3078269 |
Primers |
TRINITY_DN12917_c0_g1_i11 |
Trinucleotide |
(ATC)5 |
15 |
3521 |
3535 |
2 |
2646560 |
2643674 |
Primers |
TRINITY_DN12701_c0_g3_i15 |
Mononucleotide |
(T)11 |
11 |
5685 |
5695 |
2 |
697119 |
695101 |
Primers |
TRINITY_DN14560_c0_g1_i3 |
Mononucleotide |
(A)11 |
11 |
5974 |
5984 |
3 |
26100052 |
26103716 |
Primers |
TRINITY_DN13684_c1_g1_i6 |
Dinucleotide |
(TC)18 |
36 |
4846 |
4881 |
6 |
24625656 |
24624653 |
Primers |
TRINITY_DN13684_c1_g1_i6 |
Dinucleotide |
(CA)8 |
16 |
5798 |
5813 |
6 |
24625656 |
24624653 |
Primers |
TRINITY_DN13684_c1_g1_i6 |
Mononucleotide |
(A)12 |
12 |
5945 |
5956 |
6 |
24625656 |
24624653 |
Primers |
TRINITY_DN14602_c0_g2_i24 |
Trinucleotide |
(TTC)11 |
33 |
58 |
90 |
3 |
6435576 |
6434254 |
Primers |
TRINITY_DN14602_c0_g2_i24 |
Dinucleotide |
(CA)7 |
14 |
969 |
982 |
3 |
6435576 |
6434254 |
Primers |
TRINITY_DN11698_c0_g1_i8 |
Mononucleotide |
(A)11 |
11 |
571 |
581 |
1 |
11081 |
14004 |
Primers |
TRINITY_DN11209_c1_g2_i15 |
Dinucleotide |
(CT)7 |
14 |
987 |
1000 |
3 |
6669130 |
6667270 |
Primers |
TRINITY_DN11632_c0_g1_i8 |
Dinucleotide |
(AT)7 |
14 |
3986 |
3999 |
5 |
22816553 |
22820786 |
Primers |
TRINITY_DN11299_c1_g1_i7 |
Mononucleotide |
(A)10 |
10 |
10 |
19 |
3 |
26436447 |
26439055 |
Primers |
TRINITY_DN11299_c1_g1_i7 |
Dinucleotide |
(TA)6 |
12 |
196 |
207 |
3 |
26436447 |
26439055 |
Primers |
TRINITY_DN11299_c1_g1_i7 |
Dinucleotide |
(TA)6 |
12 |
401 |
412 |
3 |
26436447 |
26439055 |
Primers |
TRINITY_DN11299_c1_g1_i7 |
Trinucleotide |
(CTG)6 |
18 |
635 |
652 |
3 |
26436447 |
26439055 |
Primers |
TRINITY_DN11299_c1_g1_i7 |
Dinucleotide |
(AT)11 |
22 |
2789 |
2810 |
3 |
26436447 |
26439055 |
Primers |
TRINITY_DN11299_c1_g1_i7 |
Compound |
(TTC)8tttctcttcaccatctctttg(A)10 |
55 |
3116 |
3170 |
3 |
26436447 |
26439055 |
Primers |
TRINITY_DN11299_c1_g1_i7 |
Trinucleotide |
(CAG)5 |
15 |
4986 |
5000 |
3 |
26436447 |
26439055 |
Primers |
TRINITY_DN11299_c1_g1_i7 |
Trinucleotide |
(ACA)5 |
15 |
5557 |
5571 |
3 |
26436447 |
26439055 |
Primers |
TRINITY_DN11299_c1_g1_i7 |
Tetranucleotide |
(TTTC)5 |
20 |
5902 |
5921 |
3 |
26436447 |
26439055 |
Primers |
TRINITY_DN14019_c1_g1_i8 |
Mononucleotide |
(A)10 |
10 |
4770 |
4779 |
2 |
12674736 |
12670583 |
Primers |
TRINITY_DN14019_c1_g1_i8 |
Mononucleotide |
(A)11 |
11 |
5407 |
5417 |
2 |
12674736 |
12670583 |
Primers |
TRINITY_DN13380_c4_g1_i11 |
Mononucleotide |
(T)16 |
16 |
51 |
66 |
3 |
37189176 |
37190996 |
Primers |
TRINITY_DN13985_c5_g1_i2 |
Dinucleotide |
(AG)20 |
40 |
5929 |
5968 |
1 |
21350696 |
21356657 |
Primers |
TRINITY_DN11089_c0_g1_i8 |
Mononucleotide |
(T)11 |
11 |
4619 |
4629 |
7 |
14018705 |
14012735 |
Primers |
TRINITY_DN11089_c0_g1_i8 |
Mononucleotide |
(T)10 |
10 |
4872 |
4881 |
7 |
14018705 |
14012735 |
Primers |
TRINITY_DN11544_c0_g1_i16 |
Mononucleotide |
(A)10 |
10 |
5935 |
5944 |
3 |
18624253 |
18626767 |
Primers |
TRINITY_DN12763_c0_g1_i28 |
Dinucleotide |
(AT)10 |
20 |
768 |
787 |
6 |
29049167 |
29055100 |
Primers |
TRINITY_DN12763_c0_g1_i28 |
Mononucleotide |
(A)10 |
10 |
2598 |
2607 |
6 |
29049167 |
29055100 |
Primers |
TRINITY_DN12763_c0_g1_i28 |
Mononucleotide |
(A)11 |
11 |
3322 |
3332 |
6 |
29049167 |
29055100 |
Primers |
TRINITY_DN12763_c0_g1_i28 |
Dinucleotide |
(AT)6 |
12 |
3506 |
3517 |
6 |
29049167 |
29055100 |
Primers |
TRINITY_DN12763_c0_g1_i28 |
Compound* |
(A)10(AT)9* |
27 |
5928 |
5954 |
6 |
29049167 |
29055100 |
Primers |
TRINITY_DN13654_c0_g4_i5 |
Mononucleotide |
(T)11 |
11 |
308 |
318 |
6 |
24057484 |
24052526 |
Primers |
TRINITY_DN13068_c3_g2_i4 |
Trinucleotide |
(TTC)13 |
39 |
1 |
39 |
2 |
16583411 |
16585864 |
Primers |
TRINITY_DN11706_c2_g3_i10 |
Mononucleotide |
(T)21 |
21 |
3 |
23 |
1 |
24249747 |
24246913 |
Primers |
TRINITY_DN11706_c2_g3_i10 |
Mononucleotide |
(A)10 |
10 |
1926 |
1935 |
1 |
24249747 |
24246913 |
Primers |
TRINITY_DN14310_c3_g2_i2 |
Dinucleotide |
(GT)6 |
12 |
4720 |
4731 |
6 |
1460896 |
1455153 |
Primers |
TRINITY_DN12221_c1_g3_i3 |
Trinucleotide |
(CAA)5 |
15 |
5359 |
5373 |
7 |
16339422 |
16345247 |
Primers |
TRINITY_DN13219_c3_g1_i19 |
Mononucleotide |
(T)11 |
11 |
91 |
101 |
1 |
24425972 |
24427883 |
Primers |
TRINITY_DN13219_c3_g1_i19 |
Mononucleotide |
(T)15 |
15 |
3278 |
3292 |
1 |
24425972 |
24427883 |
Primers |
TRINITY_DN13219_c3_g1_i19 |
Mononucleotide |
(A)11 |
11 |
5879 |
5889 |
1 |
24425972 |
24427883 |
Primers |
TRINITY_DN12992_c1_g1_i13 |
Mononucleotide |
(T)25 |
25 |
5114 |
5138 |
1 |
2824087 |
2826546 |
Primers |
TRINITY_DN14056_c2_g1_i36 |
Mononucleotide |
(T)10 |
10 |
5097 |
5106 |
3 |
21506853 |
21508872 |
Primers |
TRINITY_DN14056_c2_g1_i36 |
Mononucleotide |
(A)13 |
13 |
5783 |
5795 |
3 |
21506853 |
21508872 |
Primers |
TRINITY_DN14545_c0_g1_i30 |
Mononucleotide |
(T)15 |
15 |
3292 |
3306 |
2 |
13096444 |
13099596 |
Primers |
TRINITY_DN14545_c0_g1_i30 |
Mononucleotide |
(A)13 |
13 |
4717 |
4729 |
2 |
13096444 |
13099596 |
Primers |
TRINITY_DN12641_c4_g1_i6 |
Mononucleotide |
(A)18 |
18 |
2295 |
2312 |
2 |
22882305 |
22880121 |
Primers |
TRINITY_DN9494_c0_g1_i7 |
Mononucleotide |
(T)10 |
10 |
2088 |
2097 |
7 |
4663133 |
4667458 |
Primers |
TRINITY_DN9494_c0_g1_i7 |
Mononucleotide |
(T)13 |
13 |
4863 |
4875 |
7 |
4663133 |
4667458 |
Primers |
TRINITY_DN9836_c0_g1_i9 |
Mononucleotide |
(A)10 |
10 |
5420 |
5429 |
2 |
11632737 |
11638450 |
Primers |
TRINITY_DN9836_c0_g1_i9 |
Tetranucleotide |
(CCTT)9 |
36 |
5670 |
5705 |
2 |
11632737 |
11638450 |
Primers |
TRINITY_DN13812_c0_g3_i11 |
Mononucleotide |
(T)10 |
10 |
947 |
956 |
3 |
884657 |
880361 |
Primers |
TRINITY_DN13812_c0_g3_i11 |
Hexanucleotide |
(TCTTTC)5 |
30 |
5892 |
5921 |
3 |
884657 |
880361 |
Primers |
TRINITY_DN13097_c1_g1_i5 |
Mononucleotide |
(T)10 |
10 |
2986 |
2995 |
1 |
19820044 |
19816774 |
Primers |
TRINITY_DN12123_c1_g1_i23 |
Dinucleotide |
(TC)6 |
12 |
162 |
173 |
4 |
390633 |
394416 |
Primers |
TRINITY_DN12123_c1_g1_i23 |
Dinucleotide |
(GT)6 |
12 |
5889 |
5900 |
4 |
390633 |
394416 |
Primers |
TRINITY_DN14268_c2_g6_i17 |
Mononucleotide |
(T)20 |
20 |
959 |
978 |
7 |
3361962 |
3363370 |
Primers |
TRINITY_DN14268_c2_g6_i17 |
Compound* |
(GTTGCT)5(TGC)8* |
50 |
2171 |
2220 |
7 |
3361962 |
3363370 |
Primers |
TRINITY_DN14268_c2_g6_i17 |
Mononucleotide |
(A)13 |
13 |
4973 |
4985 |
7 |
3361962 |
3363370 |
Primers |
TRINITY_DN14252_c0_g1_i2 |
Mononucleotide |
(T)11 |
11 |
203 |
213 |
4 |
19535025 |
19538991 |
Primers |
TRINITY_DN14252_c0_g1_i2 |
Mononucleotide |
(T)10 |
10 |
634 |
643 |
4 |
19535025 |
19538991 |
Primers |
TRINITY_DN11457_c5_g2_i9 |
Dinucleotide |
(AG)6 |
12 |
5819 |
5830 |
3 |
28992833 |
28990156 |
Primers |
TRINITY_DN12548_c1_g2_i19 |
Mononucleotide |
(T)16 |
16 |
1612 |
1627 |
4 |
11370242 |
11369155 |
Primers |
TRINITY_DN12548_c1_g2_i19 |
Mononucleotide |
(T)20 |
20 |
3373 |
3392 |
4 |
11370242 |
11369155 |
Primers |
TRINITY_DN12548_c1_g2_i19 |
Dinucleotide |
(TG)6 |
12 |
4757 |
4768 |
4 |
11370242 |
11369155 |
Primers |
TRINITY_DN14557_c2_g3_i3 |
Dinucleotide |
(TC)7 |
14 |
2032 |
2045 |
2 |
4515937 |
4510027 |
Primers |
TRINITY_DN12286_c1_g1_i3 |
Mononucleotide |
(A)10 |
10 |
2681 |
2690 |
3 |
28425372 |
28428591 |
Primers |
TRINITY_DN13447_c1_g1_i10 |
Mononucleotide |
(A)10 |
10 |
4562 |
4571 |
1 |
4388212 |
4385402 |
Primers |
TRINITY_DN13447_c1_g1_i10 |
Trinucleotide |
(GAA)9 |
27 |
5427 |
5453 |
1 |
4388212 |
4385402 |
Primers |
TRINITY_DN11330_c1_g1_i6 |
Mononucleotide |
(T)13 |
13 |
209 |
221 |
5 |
17920707 |
17917550 |
Primers |
TRINITY_DN11330_c1_g1_i6 |
Mononucleotide |
(T)10 |
10 |
4004 |
4013 |
5 |
17920707 |
17917550 |
Primers |
TRINITY_DN13667_c0_g3_i22 |
Mononucleotide |
(T)10 |
10 |
2490 |
2499 |
5 |
6946037 |
6944219 |
Primers |
TRINITY_DN11766_c0_g2_i4 |
Mononucleotide |
(T)12 |
12 |
4543 |
4554 |
7 |
18872507 |
18870936 |
Primers |
TRINITY_DN11766_c0_g2_i4 |
Mononucleotide |
(T)13 |
13 |
5418 |
5430 |
7 |
18872507 |
18870936 |
Primers |
TRINITY_DN14197_c0_g2_i9 |
Dinucleotide |
(GA)6 |
12 |
1019 |
1030 |
4 |
22208219 |
22205962 |
Primers |
TRINITY_DN12453_c1_g4_i1 |
Dinucleotide |
(TA)8 |
16 |
3721 |
3736 |
7 |
8125468 |
8119578 |
Primers |
TRINITY_DN13887_c2_g3_i5 |
Mononucleotide |
(A)10 |
10 |
3976 |
3985 |
3 |
6307190 |
6303045 |
Primers |
TRINITY_DN12375_c0_g6_i1 |
Dinucleotide |
(TA)7 |
14 |
2950 |
2963 |
1 |
4737000 |
4733463 |
Primers |
TRINITY_DN12375_c0_g6_i1 |
Mononucleotide |
(A)10 |
10 |
5244 |
5253 |
1 |
4737000 |
4733463 |
Primers |
TRINITY_DN13348_c3_g1_i12 |
Mononucleotide |
(T)17 |
17 |
52 |
68 |
2 |
13340251 |
13338583 |
Primers |
TRINITY_DN13348_c3_g1_i12 |
Dinucleotide |
(TG)20 |
40 |
254 |
293 |
2 |
13340251 |
13338583 |
Primers |
TRINITY_DN12280_c4_g1_i4 |
Compound |
(GAA)5agccttccttattcacaaccaccaaccaccacaatctgcacttcttcatccatttttacccttttttcttttttc(T)14 |
104 |
462 |
565 |
3 |
28422137 |
28420940 |
Primers |
TRINITY_DN14204_c1_g1_i4 |
Compound |
(A)10caaacaaatcatcaatgaattccattttaggcacaaacaagctagaaagagcaaaaaaaatcctaacttcgctatgcaatatgacctttctgttg(T)10 |
115 |
657 |
771 |
2 |
13020321 |
13024166 |
Primers |
TRINITY_DN14204_c1_g1_i4 |
Mononucleotide |
(T)15 |
15 |
1004 |
1018 |
2 |
13020321 |
13024166 |
Primers |
TRINITY_DN14204_c1_g1_i4 |
Mononucleotide |
(A)13 |
13 |
5766 |
5778 |
2 |
13020321 |
13024166 |
Primers |
TRINITY_DN13207_c1_g1_i24 |
Mononucleotide |
(T)13 |
13 |
4227 |
4239 |
6 |
24641830 |
24639989 |
Primers |
TRINITY_DN13207_c1_g1_i24 |
Dinucleotide |
(GA)9 |
18 |
5547 |
5564 |
6 |
24641830 |
24639989 |
Primers |
TRINITY_DN10798_c0_g2_i3 |
Dinucleotide |
(TC)6 |
12 |
20 |
31 |
6 |
27003703 |
27009419 |
Primers |
TRINITY_DN10798_c0_g2_i3 |
Mononucleotide |
(T)10 |
10 |
985 |
994 |
6 |
27003703 |
27009419 |
Primers |
TRINITY_DN10798_c0_g2_i3 |
Mononucleotide |
(T)10 |
10 |
1815 |
1824 |
6 |
27003703 |
27009419 |
Primers |
TRINITY_DN14438_c1_g1_i6 |
Mononucleotide |
(A)11 |
11 |
3573 |
3583 |
3 |
28686979 |
28689250 |
Primers |
TRINITY_DN13142_c2_g1_i13 |
Mononucleotide |
(T)15 |
15 |
539 |
553 |
1 |
180683 |
182946 |
Primers |
TRINITY_DN12644_c2_g4_i7 |
Mononucleotide |
(A)13 |
13 |
973 |
985 |
7 |
1823643 |
1819291 |
Primers |
TRINITY_DN12644_c2_g4_i7 |
Mononucleotide |
(A)17 |
17 |
2135 |
2151 |
7 |
1823643 |
1819291 |
Primers |
TRINITY_DN12644_c2_g4_i7 |
Mononucleotide |
(T)16 |
16 |
4824 |
4839 |
7 |
1823643 |
1819291 |
Primers |
TRINITY_DN14019_c1_g3_i11 |
Mononucleotide |
(A)13 |
13 |
5190 |
5202 |
5 |
22268429 |
22270481 |
Primers |
TRINITY_DN14019_c1_g3_i11 |
Mononucleotide |
(A)12 |
12 |
5622 |
5633 |
5 |
22268429 |
22270481 |
Primers |
TRINITY_DN14019_c1_g3_i11 |
Compound |
(TC)9(AC)10 |
38 |
5772 |
5809 |
5 |
22268429 |
22270481 |
Primers |
TRINITY_DN13260_c0_g1_i5 |
Dinucleotide |
(TA)9 |
18 |
78 |
95 |
6 |
5466984 |
5463544 |
Primers |
TRINITY_DN13260_c0_g1_i5 |
Dinucleotide |
(AG)7 |
14 |
3180 |
3193 |
6 |
5466984 |
5463544 |
Primers |
TRINITY_DN13260_c0_g1_i5 |
Trinucleotide |
(CGC)5 |
15 |
5274 |
5288 |
6 |
5466984 |
5463544 |
Primers |
TRINITY_DN12912_c2_g1_i26 |
Mononucleotide |
(A)10 |
10 |
188 |
197 |
2 |
20090226 |
20087884 |
Primers |
TRINITY_DN12912_c2_g1_i26 |
Trinucleotide |
(AAT)6 |
18 |
4960 |
4977 |
2 |
20090226 |
20087884 |
Primers |
TRINITY_DN13837_c1_g1_i13 |
Trinucleotide |
(TCT)17 |
51 |
5713 |
5763 |
6 |
10779567 |
10781624 |
Primers |
TRINITY_DN13228_c0_g1_i3 |
Mononucleotide |
(T)10 |
10 |
2147 |
2156 |
6 |
2318881 |
2315922 |
Primers |
TRINITY_DN13228_c0_g1_i3 |
Mononucleotide |
(A)10 |
10 |
2441 |
2450 |
6 |
2318881 |
2315922 |
Primers |
TRINITY_DN13228_c0_g1_i3 |
Mononucleotide |
(T)11 |
11 |
3748 |
3758 |
6 |
2318881 |
2315922 |
Primers |
TRINITY_DN13228_c0_g1_i3 |
Mononucleotide |
(A)13 |
13 |
4890 |
4902 |
6 |
2318881 |
2315922 |
Primers |
TRINITY_DN12790_c0_g3_i1 |
Mononucleotide |
(A)12 |
12 |
5009 |
5020 |
5 |
22365319 |
22361337 |
Primers |
TRINITY_DN12790_c0_g3_i1 |
Mononucleotide |
(A)13 |
13 |
5580 |
5592 |
5 |
22365319 |
22361337 |
Primers |
TRINITY_DN12790_c0_g3_i1 |
Dinucleotide |
(CT)7 |
14 |
5750 |
5763 |
5 |
22365319 |
22361337 |
Primers |
TRINITY_DN11785_c4_g1_i10 |
Mononucleotide |
(A)14 |
14 |
1566 |
1579 |
3 |
27413795 |
27415892 |
Primers |
TRINITY_DN11785_c4_g1_i10 |
Dinucleotide |
(AG)6 |
12 |
3082 |
3093 |
3 |
27413795 |
27415892 |
Primers |
TRINITY_DN11785_c4_g1_i10 |
Trinucleotide |
(GGT)5 |
15 |
5583 |
5597 |
3 |
27413795 |
27415892 |
Primers |
TRINITY_DN12561_c1_g7_i1 |
Compound |
(T)10cccttcattttctgtcacaacccctgtataa(T)10 |
51 |
1207 |
1257 |
5 |
4690879 |
4696740 |
Primers |
TRINITY_DN12561_c1_g7_i1 |
Dinucleotide |
(TG)9 |
18 |
1712 |
1729 |
5 |
4690879 |
4696740 |
Primers |
TRINITY_DN12561_c1_g7_i1 |
Mononucleotide |
(T)10 |
10 |
5760 |
5769 |
5 |
4690879 |
4696740 |
Primers |
TRINITY_DN13589_c0_g6_i1 |
Compound |
(T)13cttttccctttctttgcttgtcctcgggctgtggggttatttttctttattttattgggtttggtttgttttgtggtc(T)10 |
101 |
5123 |
5223 |
3 |
21213809 |
21207948 |
Primers |
TRINITY_DN13589_c0_g6_i1 |
Mononucleotide |
(T)17 |
17 |
5593 |
5609 |
3 |
21213809 |
21207948 |
Primers |
TRINITY_DN9490_c0_g1_i2 |
Compound |
(A)10gagtgaat(GA)11 |
40 |
103 |
142 |
2 |
5527113 |
5523795 |
Primers |
TRINITY_DN9490_c0_g1_i2 |
Mononucleotide |
(A)11 |
11 |
5404 |
5414 |
2 |
5527113 |
5523795 |
Primers |
TRINITY_DN12137_c2_g1_i2 |
Mononucleotide |
(T)17 |
17 |
1684 |
1700 |
4 |
13062144 |
13059651 |
Primers |
TRINITY_DN11651_c0_g1_i12 |
Trinucleotide |
(TGC)5 |
15 |
2972 |
2986 |
7 |
13068104 |
13066735 |
Primers |
TRINITY_DN11651_c0_g1_i12 |
Mononucleotide |
(A)10 |
10 |
3870 |
3879 |
7 |
13068104 |
13066735 |
Primers |
TRINITY_DN13584_c0_g1_i18 |
Mononucleotide |
(T)10 |
10 |
1448 |
1457 |
1 |
4106611 |
4109138 |
Primers |
TRINITY_DN11957_c3_g6_i2 |
Dinucleotide |
(TC)6 |
12 |
160 |
171 |
1 |
13077889 |
13073781 |
Primers |
TRINITY_DN11957_c3_g6_i2 |
Mononucleotide |
(A)21 |
21 |
1202 |
1222 |
1 |
13077889 |
13073781 |
Primers |
TRINITY_DN11957_c3_g6_i2 |
Mononucleotide |
(A)12 |
12 |
5353 |
5364 |
1 |
13077889 |
13073781 |
Primers |
TRINITY_DN12953_c0_g1_i7 |
Mononucleotide |
(A)11 |
11 |
2993 |
3003 |
6 |
92917 |
91489 |
Primers |
TRINITY_DN12953_c0_g1_i7 |
Mononucleotide |
(T)14 |
14 |
3554 |
3567 |
6 |
92917 |
91489 |
Primers |
TRINITY_DN12953_c0_g1_i7 |
Mononucleotide |
(A)11 |
11 |
5839 |
5849 |
6 |
92917 |
91489 |
Primers |
TRINITY_DN14079_c0_g1_i2 |
Mononucleotide |
(A)15 |
15 |
3938 |
3952 |
1 |
7771494 |
7775044 |
Primers |
TRINITY_DN12383_c0_g5_i2 |
Mononucleotide |
(T)10 |
10 |
249 |
258 |
7 |
11706314 |
11701679 |
Primers |
TRINITY_DN12383_c0_g5_i2 |
Dinucleotide |
(AT)6 |
12 |
1047 |
1058 |
7 |
11706314 |
11701679 |
Primers |
TRINITY_DN12383_c0_g5_i2 |
Dinucleotide |
(TG)6 |
12 |
1908 |
1919 |
7 |
11706314 |
11701679 |
Primers |
TRINITY_DN12383_c0_g5_i2 |
Compound |
(A)16tagcaaggaaagaaaaaag(A)10 |
45 |
5484 |
5528 |
7 |
11706314 |
11701679 |
Primers |
TRINITY_DN12266_c2_g1_i3 |
Mononucleotide |
(T)10 |
10 |
809 |
818 |
7 |
19084188 |
19079597 |
Primers |
TRINITY_DN12459_c4_g2_i9 |
Mononucleotide |
(G)10 |
10 |
1840 |
1849 |
7 |
1378650 |
1375672 |
Primers |
TRINITY_DN10853_c0_g1_i28 |
Mononucleotide |
(T)11 |
11 |
320 |
330 |
6 |
21920221 |
21923559 |
Primers |
TRINITY_DN10556_c0_g1_i3 |
Mononucleotide |
(T)10 |
10 |
739 |
748 |
1 |
6132575 |
6135983 |
Primers |
TRINITY_DN13574_c1_g1_i20 |
Dinucleotide |
(AC)8 |
16 |
3333 |
3348 |
7 |
15790311 |
15788754 |
Primers |
TRINITY_DN13852_c5_g1_i20 |
Mononucleotide |
(T)16 |
16 |
1582 |
1597 |
2 |
15145046 |
15143399 |
Primers |
TRINITY_DN11571_c0_g1_i8 |
Mononucleotide |
(T)13 |
13 |
2871 |
2883 |
6 |
3872950 |
3878781 |
Primers |
TRINITY_DN11571_c0_g1_i8 |
Mononucleotide |
(A)10 |
10 |
3748 |
3757 |
6 |
3872950 |
3878781 |
Primers |
TRINITY_DN11571_c0_g1_i8 |
Mononucleotide |
(T)10 |
10 |
4726 |
4735 |
6 |
3872950 |
3878781 |
Primers |
TRINITY_DN11571_c0_g1_i8 |
Dinucleotide |
(TC)7 |
14 |
5296 |
5309 |
6 |
3872950 |
3878781 |
Primers |
TRINITY_DN11571_c0_g1_i8 |
Dinucleotide |
(AT)6 |
12 |
5569 |
5580 |
6 |
3872950 |
3878781 |
Primers |
TRINITY_DN12106_c1_g1_i2 |
Mononucleotide |
(T)10 |
10 |
280 |
289 |
3 |
12914820 |
12919537 |
Primers |
TRINITY_DN12106_c1_g1_i2 |
Mononucleotide |
(A)11 |
11 |
1380 |
1390 |
3 |
12914820 |
12919537 |
Primers |
TRINITY_DN12106_c1_g1_i2 |
Dinucleotide |
(AT)15 |
30 |
2487 |
2516 |
3 |
12914820 |
12919537 |
Primers |
TRINITY_DN12106_c1_g1_i2 |
Trinucleotide |
(CAT)5 |
15 |
5617 |
5631 |
3 |
12914820 |
12919537 |
Primers |
TRINITY_DN10954_c0_g1_i10 |
Mononucleotide |
(T)14 |
14 |
9 |
22 |
6 |
22578727 |
22584364 |
Primers |
TRINITY_DN10954_c0_g1_i10 |
Dinucleotide |
(AT)7 |
14 |
2704 |
2717 |
6 |
22578727 |
22584364 |
Primers |
TRINITY_DN13049_c1_g2_i4 |
Dinucleotide |
(GA)6 |
12 |
2171 |
2182 |
2 |
20750442 |
20747791 |
Primers |
TRINITY_DN13049_c1_g2_i4 |
Dinucleotide |
(AT)6 |
12 |
2826 |
2837 |
2 |
20750442 |
20747791 |
Primers |
TRINITY_DN13049_c1_g2_i4 |
Mononucleotide |
(A)11 |
11 |
4860 |
4870 |
2 |
20750442 |
20747791 |
Primers |
TRINITY_DN14064_c0_g2_i6 |
Mononucleotide |
(T)10 |
10 |
3476 |
3485 |
4 |
1953715 |
1957231 |
Primers |
TRINITY_DN14064_c0_g2_i6 |
Mononucleotide |
(T)13 |
13 |
4196 |
4208 |
4 |
1953715 |
1957231 |
Primers |
TRINITY_DN11807_c1_g3_i6 |
Mononucleotide |
(A)16 |
16 |
1033 |
1048 |
2 |
19186165 |
19189271 |
Primers |
TRINITY_DN11807_c1_g3_i6 |
Mononucleotide |
(A)12 |
12 |
5096 |
5107 |
2 |
19186165 |
19189271 |
Primers |
TRINITY_DN11654_c0_g1_i16 |
Hexanucleotide |
(TGAAAG)5 |
30 |
5552 |
5581 |
2 |
11696236 |
11698577 |
Primers |
TRINITY_DN9440_c0_g1_i2 |
Mononucleotide |
(A)10 |
10 |
1991 |
2000 |
5 |
22831892 |
22835376 |
Primers |
TRINITY_DN9440_c0_g1_i2 |
Dinucleotide |
(TG)10 |
20 |
3850 |
3869 |
5 |
22831892 |
22835376 |
Primers |
TRINITY_DN12686_c1_g1_i20 |
Dinucleotide |
(AT)6 |
12 |
371 |
382 |
6 |
15902026 |
15905460 |
Primers |
TRINITY_DN12686_c1_g1_i20 |
Mononucleotide |
(T)16 |
16 |
2389 |
2404 |
6 |
15902026 |
15905460 |
Primers |
TRINITY_DN12686_c1_g1_i20 |
Trinucleotide |
(CGT)6 |
18 |
2513 |
2530 |
6 |
15902026 |
15905460 |
Primers |
TRINITY_DN11678_c0_g1_i19 |
Mononucleotide |
(A)11 |
11 |
5590 |
5600 |
3 |
9752668 |
9755422 |
Primers |
TRINITY_DN13313_c4_g2_i5 |
Mononucleotide |
(T)10 |
10 |
527 |
536 |
7 |
11411184 |
11408727 |
Primers |
TRINITY_DN13313_c4_g2_i5 |
Trinucleotide |
(GAA)5 |
15 |
5511 |
5525 |
7 |
11411184 |
11408727 |
Primers |
TRINITY_DN13313_c4_g2_i5 |
Compound |
(A)11gaaaaagaaaaacaaatctcaattttcgaaatcc(T)10 |
55 |
5762 |
5816 |
7 |
11411184 |
11408727 |
Primers |
TRINITY_DN14715_c1_g2_i21 |
Mononucleotide |
(A)10 |
10 |
483 |
492 |
3 |
2044099 |
2041248 |
Primers |
TRINITY_DN14715_c1_g2_i21 |
Dinucleotide |
(TA)6 |
12 |
3403 |
3414 |
3 |
2044099 |
2041248 |
Primers |
TRINITY_DN14715_c1_g2_i21 |
Compound |
(T)11cc(T)17 |
30 |
5782 |
5811 |
3 |
2044099 |
2041248 |
Primers |
TRINITY_DN12351_c1_g1_i5 |
Trinucleotide |
(TTA)5 |
15 |
756 |
770 |
2 |
13217160 |
13222446 |
Primers |
TRINITY_DN12351_c1_g1_i5 |
Trinucleotide |
(TTA)5 |
15 |
1258 |
1272 |
2 |
13217160 |
13222446 |
Primers |
TRINITY_DN12351_c1_g1_i5 |
Mononucleotide |
(T)10 |
10 |
1650 |
1659 |
2 |
13217160 |
13222446 |
Primers |
TRINITY_DN12351_c1_g1_i5 |
Mononucleotide |
(A)16 |
16 |
5509 |
5524 |
2 |
13217160 |
13222446 |
Primers |
TRINITY_DN14676_c4_g1_i23 |
Compound |
(T)11caattaaattattaatttctaaatagtggtttctcaccggttatgtcaaattgtcaaattcacat(A)10 |
86 |
1267 |
1352 |
4 |
20065345 |
20064940 |
Primers |
TRINITY_DN14676_c4_g1_i23 |
Mononucleotide |
(A)10 |
10 |
3541 |
3550 |
4 |
20065345 |
20064940 |
Primers |
TRINITY_DN12395_c2_g2_i1 |
Trinucleotide |
(ATT)5 |
15 |
1608 |
1622 |
3 |
20418964 |
20414035 |
Primers |
TRINITY_DN13327_c0_g1_i9 |
Mononucleotide |
(T)10 |
10 |
537 |
546 |
5 |
24817561 |
24815860 |
Primers |
TRINITY_DN13327_c0_g1_i9 |
Mononucleotide |
(T)16 |
16 |
5347 |
5362 |
5 |
24817561 |
24815860 |
Primers |
TRINITY_DN13711_c2_g2_i5 |
Mononucleotide |
(T)11 |
11 |
1 |
11 |
1 |
9352871 |
9350480 |
Primers |
TRINITY_DN13711_c2_g2_i5 |
Mononucleotide |
(T)22 |
22 |
3293 |
3314 |
1 |
9352871 |
9350480 |
Primers |
TRINITY_DN13711_c2_g2_i5 |
Dinucleotide |
(AT)9 |
18 |
3566 |
3583 |
1 |
9352871 |
9350480 |
Primers |
TRINITY_DN12262_c1_g2_i15 |
Trinucleotide |
(GAG)5 |
15 |
137 |
151 |
6 |
10954137 |
10952696 |
Primers |
TRINITY_DN10855_c0_g1_i24 |
Mononucleotide |
(T)10 |
10 |
2167 |
2176 |
7 |
18987265 |
18984110 |
Primers |
TRINITY_DN10855_c0_g1_i24 |
Trinucleotide |
(AAG)11 |
33 |
5538 |
5570 |
7 |
18987265 |
18984110 |
Primers |
TRINITY_DN11855_c0_g2_i9 |
Compound |
(TG)7(AG)7 |
28 |
1528 |
1555 |
1 |
3741486 |
3743409 |
Primers |
TRINITY_DN12594_c0_g2_i3 |
Dinucleotide |
(CA)6 |
12 |
3119 |
3130 |
5 |
8140688 |
8143721 |
Primers |
TRINITY_DN13390_c0_g1_i10 |
Compound |
(AT)6ttcc(T)10 |
26 |
692 |
717 |
5 |
4602065 |
4599825 |
Primers |
TRINITY_DN13390_c0_g1_i10 |
Mononucleotide |
(A)25 |
25 |
2555 |
2579 |
5 |
4602065 |
4599825 |
Primers |
TRINITY_DN13390_c0_g1_i10 |
Mononucleotide |
(A)10 |
10 |
3052 |
3061 |
5 |
4602065 |
4599825 |
Primers |
TRINITY_DN13779_c1_g2_i18 |
Dinucleotide |
(TA)8 |
16 |
4027 |
4042 |
2 |
18642171 |
18645731 |
Primers |
TRINITY_DN13779_c1_g2_i18 |
Mononucleotide |
(A)24 |
24 |
4162 |
4185 |
2 |
18642171 |
18645731 |
Primers |
TRINITY_DN12690_c0_g2_i3 |
Compound |
(T)11agtaaaaatttgaagtgtccatgagaattgtgtaattgtaaaggg(T)10 |
66 |
5450 |
5515 |
7 |
8340113 |
8337533 |
Primers |
TRINITY_DN12860_c1_g6_i6 |
Compound |
(CT)12(AT)8 |
40 |
172 |
211 |
5 |
24876369 |
24878129 |
Primers |
TRINITY_DN11714_c0_g1_i5 |
Mononucleotide |
(A)10 |
10 |
1814 |
1823 |
2 |
2099128 |
2100902 |
Primers |
TRINITY_DN11714_c0_g1_i5 |
Mononucleotide |
(A)11 |
11 |
2434 |
2444 |
2 |
2099128 |
2100902 |
Primers |
TRINITY_DN11714_c0_g1_i5 |
Mononucleotide |
(T)10 |
10 |
5477 |
5486 |
2 |
2099128 |
2100902 |
Primers |
TRINITY_DN12756_c2_g3_i2 |
Dinucleotide |
(TG)6 |
12 |
4844 |
4855 |
3 |
37099875 |
37103480 |
Primers |
TRINITY_DN13014_c1_g1_i17 |
Mononucleotide |
(A)11 |
11 |
3648 |
3658 |
5 |
20704129 |
20705952 |
Primers |
TRINITY_DN13014_c1_g1_i17 |
Trinucleotide |
(TGC)8 |
24 |
5288 |
5311 |
5 |
20704129 |
20705952 |
Primers |
TRINITY_DN13014_c1_g1_i17 |
Dinucleotide |
(AT)6 |
12 |
5525 |
5536 |
5 |
20704129 |
20705952 |
Primers |
TRINITY_DN12421_c1_g1_i7 |
Mononucleotide |
(T)12 |
12 |
116 |
127 |
6 |
3827130 |
3823800 |
Primers |
TRINITY_DN10884_c0_g1_i18 |
Mononucleotide |
(A)10 |
10 |
2641 |
2650 |
6 |
20353527 |
20357814 |
Primers |
TRINITY_DN10884_c0_g1_i18 |
Mononucleotide |
(T)10 |
10 |
3203 |
3212 |
6 |
20353527 |
20357814 |
Primers |
TRINITY_DN10884_c0_g1_i18 |
Mononucleotide |
(A)13 |
13 |
5140 |
5152 |
6 |
20353527 |
20357814 |
Primers |
TRINITY_DN10884_c0_g1_i18 |
Trinucleotide |
(TGG)5 |
15 |
5391 |
5405 |
6 |
20353527 |
20357814 |
Primers |
TRINITY_DN13667_c0_g4_i5 |
Dinucleotide |
(AG)21 |
42 |
580 |
621 |
6 |
25353282 |
25358481 |
Primers |
TRINITY_DN13667_c0_g4_i5 |
Dinucleotide |
(GT)6 |
12 |
1056 |
1067 |
6 |
25353282 |
25358481 |
Primers |
TRINITY_DN13667_c0_g4_i5 |
Mononucleotide |
(T)10 |
10 |
1365 |
1374 |
6 |
25353282 |
25358481 |
Primers |
TRINITY_DN13667_c0_g4_i5 |
Mononucleotide |
(A)16 |
16 |
3473 |
3488 |
6 |
25353282 |
25358481 |
Primers |
TRINITY_DN13667_c0_g4_i5 |
Dinucleotide |
(GA)7 |
14 |
4082 |
4095 |
6 |
25353282 |
25358481 |
Primers |
TRINITY_DN13667_c0_g4_i5 |
Trinucleotide |
(AAT)5 |
15 |
4498 |
4512 |
6 |
25353282 |
25358481 |
Primers |
TRINITY_DN13667_c0_g4_i5 |
Mononucleotide |
(T)12 |
12 |
5097 |
5108 |
6 |
25353282 |
25358481 |
Primers |
TRINITY_DN13161_c0_g3_i5 |
Mononucleotide |
(A)10 |
10 |
337 |
346 |
1 |
3641038 |
3644245 |
Primers |
TRINITY_DN13161_c0_g3_i5 |
Dinucleotide |
(TC)9 |
18 |
4603 |
4620 |
1 |
3641038 |
3644245 |
Primers |
TRINITY_DN8901_c0_g1_i1 |
Mononucleotide |
(T)10 |
10 |
742 |
751 |
2 |
19179446 |
19173672 |
Primers |
TRINITY_DN8901_c0_g1_i1 |
Mononucleotide |
(T)10 |
10 |
1182 |
1191 |
2 |
19179446 |
19173672 |
Primers |
TRINITY_DN8901_c0_g1_i1 |
Mononucleotide |
(T)11 |
11 |
4342 |
4352 |
2 |
19179446 |
19173672 |
Primers |
TRINITY_DN11402_c0_g1_i17 |
Mononucleotide |
(A)10 |
10 |
838 |
847 |
4 |
19898462 |
19899312 |
Primers |
TRINITY_DN13855_c2_g1_i12 |
Trinucleotide |
(TAT)6 |
18 |
49 |
66 |
2 |
7549800 |
7555551 |
Primers |
TRINITY_DN13855_c2_g1_i12 |
Trinucleotide |
(AAG)6 |
18 |
5229 |
5246 |
2 |
7549800 |
7555551 |
Primers |
TRINITY_DN10983_c0_g1_i8 |
Mononucleotide |
(A)10 |
10 |
2384 |
2393 |
2 |
17032198 |
17028704 |
Primers |
TRINITY_DN11277_c0_g1_i2 |
Mononucleotide |
(A)12 |
12 |
2043 |
2054 |
1 |
22939737 |
22944223 |
Primers |
TRINITY_DN11277_c0_g1_i2 |
Dinucleotide |
(AG)7 |
14 |
5212 |
5225 |
1 |
22939737 |
22944223 |
Primers |
TRINITY_DN8751_c0_g1_i5 |
Mononucleotide |
(A)10 |
10 |
1726 |
1735 |
7 |
12909647 |
12904988 |
Primers |
TRINITY_DN13412_c3_g2_i1 |
Mononucleotide |
(T)12 |
12 |
409 |
420 |
1 |
21913140 |
21908920 |
Primers |
TRINITY_DN13412_c3_g2_i1 |
Mononucleotide |
(A)10 |
10 |
4851 |
4860 |
1 |
21913140 |
21908920 |
Primers |
TRINITY_DN13412_c3_g2_i1 |
Compound |
(T)11ctaaa(ATT)5 |
31 |
5545 |
5575 |
1 |
21913140 |
21908920 |
Primers |
TRINITY_DN14547_c1_g6_i1 |
Mononucleotide |
(G)12 |
12 |
2733 |
2744 |
3 |
12159356 |
12155143 |
Primers |
TRINITY_DN11812_c1_g1_i6 |
Trinucleotide |
(TCT)9 |
27 |
49 |
75 |
6 |
22179551 |
22177097 |
Primers |
TRINITY_DN10466_c0_g1_i6 |
Mononucleotide |
(T)10 |
10 |
4846 |
4855 |
3 |
34202897 |
34199978 |
Primers |
TRINITY_DN13924_c1_g2_i14 |
Compound |
(TTC)8(T)11 |
35 |
329 |
363 |
6 |
5034295 |
5032272 |
Primers |
TRINITY_DN13924_c1_g2_i14 |
Dinucleotide |
(CT)14 |
28 |
4880 |
4907 |
6 |
5034295 |
5032272 |
Primers |
TRINITY_DN13924_c1_g2_i14 |
Mononucleotide |
(T)10 |
10 |
5415 |
5424 |
6 |
5034295 |
5032272 |
Primers |
TRINITY_DN13924_c1_g2_i14 |
Mononucleotide |
(T)21 |
21 |
5638 |
5658 |
6 |
5034295 |
5032272 |
Primers |
TRINITY_DN9765_c1_g1_i8 |
Mononucleotide |
(T)10 |
10 |
324 |
333 |
4 |
2871979 |
2874076 |
Primers |
TRINITY_DN9765_c1_g1_i8 |
Mononucleotide |
(T)22 |
22 |
802 |
823 |
4 |
2871979 |
2874076 |
Primers |
TRINITY_DN9765_c1_g1_i8 |
Mononucleotide |
(T)11 |
11 |
2869 |
2879 |
4 |
2871979 |
2874076 |
Primers |
TRINITY_DN9765_c1_g1_i8 |
Trinucleotide |
(TAT)7 |
21 |
3658 |
3678 |
4 |
2871979 |
2874076 |
Primers |
TRINITY_DN14390_c0_g1_i6 |
Mononucleotide |
(T)11 |
11 |
268 |
278 |
4 |
4895515 |
4889994 |
Primers |
TRINITY_DN14390_c0_g1_i6 |
Compound |
(T)17(G)11 |
28 |
442 |
469 |
4 |
4895515 |
4889994 |
Primers |
TRINITY_DN12830_c0_g3_i8 |
Mononucleotide |
(T)17 |
17 |
235 |
251 |
5 |
27245220 |
27247638 |
Primers |
TRINITY_DN12830_c0_g3_i8 |
Mononucleotide |
(T)10 |
10 |
3406 |
3415 |
5 |
27245220 |
27247638 |
Primers |
TRINITY_DN14617_c2_g1_i16 |
Trinucleotide |
(GCA)5 |
15 |
569 |
583 |
1 |
19678512 |
19680314 |
Primers |
TRINITY_DN11375_c1_g1_i15 |
Mononucleotide |
(A)10 |
10 |
841 |
850 |
5 |
27413990 |
27418797 |
Primers |
TRINITY_DN14691_c3_g7_i5 |
Mononucleotide |
(T)10 |
10 |
32 |
41 |
3 |
35960338 |
35963829 |
Primers |
TRINITY_DN14691_c3_g7_i5 |
Dinucleotide |
(AG)6 |
12 |
3835 |
3846 |
3 |
35960338 |
35963829 |
Primers |
TRINITY_DN11224_c1_g1_i3 |
Mononucleotide |
(A)12 |
12 |
2798 |
2809 |
5 |
17602482 |
17608208 |
Primers |
TRINITY_DN11224_c1_g1_i3 |
Dinucleotide |
(AG)6 |
12 |
4683 |
4694 |
5 |
17602482 |
17608208 |
Primers |
TRINITY_DN11224_c1_g1_i3 |
Mononucleotide |
(A)10 |
10 |
5339 |
5348 |
5 |
17602482 |
17608208 |
Primers |
TRINITY_DN11224_c1_g1_i3 |
Mononucleotide |
(A)16 |
16 |
5589 |
5604 |
5 |
17602482 |
17608208 |
Primers |
TRINITY_DN14364_c4_g1_i17 |
Mononucleotide |
(T)10 |
10 |
2697 |
2706 |
6 |
5876707 |
5874873 |
Primers |
TRINITY_DN14461_c0_g1_i19 |
Mononucleotide |
(T)11 |
11 |
116 |
126 |
3 |
26968859 |
26969614 |
Primers |
TRINITY_DN11381_c0_g1_i10 |
Mononucleotide |
(A)12 |
12 |
5718 |
5729 |
1 |
6743101 |
6741355 |
Primers |
TRINITY_DN12087_c0_g1_i13 |
Mononucleotide |
(T)16 |
16 |
745 |
760 |
5 |
10356038 |
10359988 |
Primers |
TRINITY_DN13035_c0_g2_i3 |
Mononucleotide |
(A)15 |
15 |
5139 |
5153 |
4 |
21095028 |
21097107 |
Primers |
TRINITY_DN13385_c0_g2_i18 |
Mononucleotide |
(T)15 |
15 |
750 |
764 |
3 |
22577747 |
22574418 |
Primers |
TRINITY_DN11479_c4_g2_i26 |
Mononucleotide |
(A)14 |
14 |
191 |
204 |
2 |
14951937 |
14949508 |
Primers |
TRINITY_DN11479_c4_g2_i26 |
Trinucleotide |
(CTT)7 |
21 |
2734 |
2754 |
2 |
14951937 |
14949508 |
Primers |
TRINITY_DN13462_c1_g1_i16 |
Mononucleotide |
(A)10 |
10 |
2938 |
2947 |
2 |
6825567 |
6827646 |
Primers |
TRINITY_DN13776_c1_g1_i13 |
Mononucleotide |
(A)16 |
16 |
293 |
308 |
7 |
18784584 |
18787590 |
Primers |
TRINITY_DN13776_c1_g1_i13 |
Tetranucleotide |
(CATT)6 |
24 |
551 |
574 |
7 |
18784584 |
18787590 |
Primers |
TRINITY_DN13776_c1_g1_i13 |
Mononucleotide |
(A)11 |
11 |
3012 |
3022 |
7 |
18784584 |
18787590 |
Primers |
TRINITY_DN13776_c1_g1_i13 |
Mononucleotide |
(A)13 |
13 |
5666 |
5678 |
7 |
18784584 |
18787590 |
Primers |
TRINITY_DN13354_c3_g5_i1 |
Dinucleotide |
(AT)7 |
14 |
51 |
64 |
3 |
31461648 |
31455958 |
Primers |
TRINITY_DN13354_c3_g5_i1 |
Mononucleotide |
(A)10 |
10 |
577 |
586 |
3 |
31461648 |
31455958 |
Primers |
TRINITY_DN12388_c1_g1_i2 |
Tetranucleotide |
(GATT)5 |
20 |
51 |
70 |
6 |
25785726 |
25791435 |
Primers |
TRINITY_DN13126_c0_g7_i12 |
Mononucleotide |
(T)16 |
16 |
22 |
37 |
7 |
16634529 |
16632208 |
Primers |
TRINITY_DN13126_c0_g7_i12 |
Mononucleotide |
(T)32 |
32 |
159 |
190 |
7 |
16634529 |
16632208 |
Primers |
TRINITY_DN13126_c0_g7_i12 |
Mononucleotide |
(T)11 |
11 |
3096 |
3106 |
7 |
16634529 |
16632208 |
Primers |
TRINITY_DN10903_c2_g2_i3 |
Mononucleotide |
(T)11 |
11 |
66 |
76 |
6 |
16439547 |
16442641 |
Primers |
TRINITY_DN12008_c1_g1_i1 |
Mononucleotide |
(G)10 |
10 |
4397 |
4406 |
2 |
1522782 |
1524316 |
Primers |
TRINITY_DN12008_c1_g1_i1 |
Compound |
(GAA)12gggaataatattttgctcgtgaagacagcgacttgttgctttcatgattcctcaacccacactgattgaatcgtacgca(ATT)6 |
133 |
5346 |
5478 |
2 |
1522782 |
1524316 |
Primers |
TRINITY_DN13009_c0_g1_i11 |
Mononucleotide |
(T)20 |
20 |
1414 |
1433 |
6 |
23502945 |
23500415 |
Primers |
TRINITY_DN10920_c0_g1_i28 |
Mononucleotide |
(T)10 |
10 |
231 |
240 |
7 |
14448712 |
14451451 |
Primers |
TRINITY_DN11609_c0_g5_i2 |
Trinucleotide |
(CTG)7 |
21 |
1856 |
1876 |
2 |
2023619 |
2021707 |
Primers |
TRINITY_DN10531_c0_g1_i2 |
Mononucleotide |
(T)10 |
10 |
3483 |
3492 |
2 |
13997462 |
14001762 |
Primers |
TRINITY_DN14442_c2_g4_i9 |
Trinucleotide |
(TTA)5 |
15 |
104 |
118 |
2 |
18777002 |
18772214 |
Primers |
TRINITY_DN14442_c2_g4_i9 |
Mononucleotide |
(A)12 |
12 |
244 |
255 |
2 |
18777002 |
18772214 |
Primers |
TRINITY_DN14442_c2_g4_i9 |
Mononucleotide |
(T)12 |
12 |
4838 |
4849 |
2 |
18777002 |
18772214 |
Primers |
TRINITY_DN14318_c3_g1_i4 |
Dinucleotide |
(TA)9 |
18 |
248 |
265 |
5 |
24538627 |
24540602 |
Primers |
TRINITY_DN14318_c3_g1_i4 |
Trinucleotide |
(AAT)5 |
15 |
734 |
748 |
5 |
24538627 |
24540602 |
Primers |
TRINITY_DN12259_c0_g1_i16 |
Dinucleotide |
(AT)11 |
22 |
4525 |
4546 |
5 |
26127771 |
26128672 |
Primers |
TRINITY_DN13060_c0_g1_i15 |
Dinucleotide |
(TC)8 |
16 |
421 |
436 |
6 |
25242924 |
25244779 |
Primers |
TRINITY_DN13060_c0_g1_i15 |
Dinucleotide |
(AG)7 |
14 |
3192 |
3205 |
6 |
25242924 |
25244779 |
Primers |
TRINITY_DN11869_c2_g4_i11 |
Mononucleotide |
(A)11 |
11 |
3939 |
3949 |
5 |
12600249 |
12595687 |
Primers |
TRINITY_DN11869_c2_g4_i11 |
Hexanucleotide |
(TGATGC)5 |
30 |
4939 |
4968 |
5 |
12600249 |
12595687 |
Primers |
TRINITY_DN11869_c2_g4_i11 |
Compound |
(GAT)5(GAA)8 |
39 |
5167 |
5205 |
5 |
12600249 |
12595687 |
Primers |
TRINITY_DN11869_c2_g4_i11 |
Dinucleotide |
(TC)9 |
18 |
5583 |
5600 |
5 |
12600249 |
12595687 |
Primers |
TRINITY_DN13502_c0_g1_i10 |
Mononucleotide |
(T)15 |
15 |
259 |
273 |
3 |
7116557 |
7113584 |
Primers |
TRINITY_DN13502_c0_g1_i10 |
Mononucleotide |
(A)11 |
11 |
2207 |
2217 |
3 |
7116557 |
7113584 |
Primers |
TRINITY_DN11128_c1_g2_i11 |
Mononucleotide |
(T)12 |
12 |
381 |
392 |
3 |
9391019 |
9392822 |
Primers |
TRINITY_DN11128_c1_g2_i11 |
Mononucleotide |
(T)11 |
11 |
579 |
589 |
3 |
9391019 |
9392822 |
Primers |
TRINITY_DN13245_c1_g1_i14 |
Mononucleotide |
(T)10 |
10 |
658 |
667 |
1 |
12137111 |
12138453 |
Primers |
TRINITY_DN13245_c1_g1_i14 |
Mononucleotide |
(A)10 |
10 |
965 |
974 |
1 |
12137111 |
12138453 |
Primers |
TRINITY_DN13245_c1_g1_i14 |
Mononucleotide |
(T)10 |
10 |
1097 |
1106 |
1 |
12137111 |
12138453 |
Primers |
TRINITY_DN10998_c0_g1_i18 |
Mononucleotide |
(A)12 |
12 |
4344 |
4355 |
6 |
4808917 |
4803261 |
Primers |
TRINITY_DN10998_c0_g1_i18 |
Compound |
(TA)6(GA)7 |
26 |
4991 |
5016 |
6 |
4808917 |
4803261 |
Primers |
TRINITY_DN14310_c3_g1_i1 |
Mononucleotide |
(C)10 |
10 |
502 |
511 |
4 |
5721823 |
5716195 |
Primers |
TRINITY_DN12168_c3_g2_i5 |
Tetranucleotide |
(ATTC)5 |
20 |
1339 |
1358 |
2 |
1632472 |
1630017 |
Primers |
TRINITY_DN12670_c3_g2_i4 |
Trinucleotide |
(TCT)10 |
30 |
1 |
30 |
5 |
22113057 |
22118699 |
Primers |
TRINITY_DN12670_c3_g2_i4 |
Mononucleotide |
(T)23 |
23 |
407 |
429 |
5 |
22113057 |
22118699 |
Primers |
TRINITY_DN12670_c3_g2_i4 |
Mononucleotide |
(T)10 |
10 |
5368 |
5377 |
5 |
22113057 |
22118699 |
Primers |
TRINITY_DN11609_c0_g8_i1 |
Pentanucleotide |
(GAAAA)6 |
30 |
59 |
88 |
2 |
21765 |
17765 |
Primers |
TRINITY_DN11609_c0_g8_i1 |
Mononucleotide |
(T)10 |
10 |
4108 |
4117 |
2 |
21765 |
17765 |
Primers |
TRINITY_DN14268_c2_g1_i8 |
Trinucleotide |
(CTG)6 |
18 |
3352 |
3369 |
1 |
5475181 |
5472889 |
Primers |
TRINITY_DN11315_c0_g1_i3 |
Mononucleotide |
(T)10 |
10 |
3767 |
3776 |
5 |
23994658 |
23990287 |
Primers |
TRINITY_DN11069_c6_g1_i2 |
Compound* |
(AT)6tatgatatttgttcatcttc(TCT)5tcgtctttctttctttccttc(TTCT)5(TTC)6*ctcttcca(CT)6tcttcacaggtcactggt(GA)7 |
154 |
53 |
206 |
5 |
3415356 |
3420918 |
Primers |
TRINITY_DN11676_c0_g1_i9 |
Mononucleotide |
(T)10 |
10 |
785 |
794 |
6 |
6413388 |
6416513 |
Primers |
TRINITY_DN11676_c0_g1_i9 |
Mononucleotide |
(A)26 |
26 |
4245 |
4270 |
6 |
6413388 |
6416513 |
Primers |
TRINITY_DN11676_c0_g1_i9 |
Trinucleotide |
(TTG)6 |
18 |
5386 |
5403 |
6 |
6413388 |
6416513 |
Primers |
TRINITY_DN14059_c1_g1_i2 |
Dinucleotide |
(CT)6 |
12 |
2861 |
2872 |
3 |
10076837 |
10080152 |
Primers |
TRINITY_DN14059_c1_g1_i2 |
Mononucleotide |
(A)13 |
13 |
4121 |
4133 |
3 |
10076837 |
10080152 |
Primers |
TRINITY_DN14059_c1_g1_i2 |
Dinucleotide |
(AT)6 |
12 |
4314 |
4325 |
3 |
10076837 |
10080152 |
Primers |
TRINITY_DN14059_c1_g1_i2 |
Dinucleotide |
(AT)7 |
14 |
4593 |
4606 |
3 |
10076837 |
10080152 |
Primers |
TRINITY_DN14059_c1_g1_i2 |
Trinucleotide |
(AAT)5 |
15 |
5391 |
5405 |
3 |
10076837 |
10080152 |
Primers |
TRINITY_DN12361_c5_g1_i6 |
Trinucleotide |
(ATG)6 |
18 |
1451 |
1468 |
5 |
21777008 |
21779688 |
Primers |
TRINITY_DN12361_c5_g1_i6 |
Dinucleotide |
(GA)8 |
16 |
3996 |
4011 |
5 |
21777008 |
21779688 |
Primers |
TRINITY_DN12361_c5_g1_i6 |
Mononucleotide |
(T)11 |
11 |
4504 |
4514 |
5 |
21777008 |
21779688 |
Primers |
TRINITY_DN13252_c2_g2_i9 |
Mononucleotide |
(A)10 |
10 |
16 |
25 |
6 |
2898515 |
2894200 |
Primers |
TRINITY_DN13252_c2_g2_i9 |
Mononucleotide |
(A)24 |
24 |
4972 |
4995 |
6 |
2898515 |
2894200 |
Primers |
TRINITY_DN14550_c1_g1_i20 |
Mononucleotide |
(A)14 |
14 |
3378 |
3391 |
5 |
5021910 |
5023135 |
Primers |
TRINITY_DN13578_c0_g3_i5 |
Mononucleotide |
(T)10 |
10 |
1133 |
1142 |
3 |
242777 |
244506 |
Primers |
TRINITY_DN13578_c0_g3_i5 |
Mononucleotide |
(T)10 |
10 |
1779 |
1788 |
3 |
242777 |
244506 |
Primers |
TRINITY_DN13244_c1_g1_i13 |
Mononucleotide |
(T)15 |
15 |
3299 |
3313 |
5 |
23827330 |
23830776 |
Primers |
TRINITY_DN13244_c1_g1_i13 |
Trinucleotide |
(CAG)7 |
21 |
3849 |
3869 |
5 |
23827330 |
23830776 |
Primers |
TRINITY_DN13244_c1_g1_i13 |
Mononucleotide |
(T)10 |
10 |
4514 |
4523 |
5 |
23827330 |
23830776 |
Primers |
TRINITY_DN13244_c1_g1_i13 |
Mononucleotide |
(T)14 |
14 |
5128 |
5141 |
5 |
23827330 |
23830776 |
Primers |
TRINITY_DN13244_c1_g1_i13 |
Dinucleotide |
(TC)7 |
14 |
5451 |
5464 |
5 |
23827330 |
23830776 |
Primers |
TRINITY_DN13729_c0_g1_i26 |
Mononucleotide |
(A)10 |
10 |
5002 |
5011 |
6 |
24193210 |
24195086 |
Primers |
TRINITY_DN12811_c3_g1_i13 |
Trinucleotide |
(TCT)7 |
21 |
110 |
130 |
2 |
15938894 |
15935612 |
Primers |
TRINITY_DN12811_c3_g1_i13 |
Mononucleotide |
(T)10 |
10 |
5491 |
5500 |
2 |
15938894 |
15935612 |
Primers |
TRINITY_DN10140_c0_g1_i14 |
Mononucleotide |
(T)13 |
13 |
2772 |
2784 |
6 |
4625475 |
4628831 |
Primers |
TRINITY_DN12996_c4_g1_i12 |
Compound |
(A)10tcatgaacagtggaattagaaaaaatt(A)18 |
55 |
5113 |
5167 |
5 |
24473967 |
24477394 |
Primers |
TRINITY_DN12996_c4_g1_i12 |
Compound |
(AG)6aatgttcgtagcgaaagagcgagcgaaggggagagagaa(AG)7 |
65 |
5480 |
5544 |
5 |
24473967 |
24477394 |
Primers |
TRINITY_DN10723_c2_g4_i9 |
Mononucleotide |
(A)10 |
10 |
5463 |
5472 |
6 |
12314036 |
12317070 |
Primers |
TRINITY_DN8912_c0_g1_i5 |
Mononucleotide |
(A)12 |
12 |
5305 |
5316 |
Scaffold000122 |
210508 |
214917 |
Primers |
TRINITY_DN10804_c0_g1_i1 |
Trinucleotide |
(ATG)5 |
15 |
5194 |
5208 |
6 |
3937517 |
3943128 |
Primers |
TRINITY_DN13942_c1_g1_i11 |
Compound* |
(T)12gttttctcttcttcattctttcaagttcttcaatccatcaaacaccatcatttagatctcttttcacaaaaaaaaagaaaaaggaatcccaa(TTC)8(TC)8* |
142 |
7 |
148 |
7 |
16779692 |
16779138 |
Primers |
TRINITY_DN12308_c2_g2_i25 |
Dinucleotide |
(GA)11 |
22 |
540 |
561 |
5 |
21076564 |
21074857 |
Primers |
TRINITY_DN14483_c3_g1_i30 |
Mononucleotide |
(A)12 |
12 |
2313 |
2324 |
3 |
18404199 |
18401769 |
Primers |
TRINITY_DN14483_c3_g1_i30 |
Mononucleotide |
(T)18 |
18 |
5571 |
5588 |
3 |
18404199 |
18401769 |
Primers |
TRINITY_DN13076_c3_g2_i2 |
Mononucleotide |
(T)13 |
13 |
1702 |
1714 |
1 |
7657186 |
7652968 |
Primers |
TRINITY_DN13076_c3_g2_i2 |
Mononucleotide |
(A)12 |
12 |
2204 |
2215 |
1 |
7657186 |
7652968 |
Primers |
TRINITY_DN13076_c3_g2_i2 |
Mononucleotide |
(A)15 |
15 |
2329 |
2343 |
1 |
7657186 |
7652968 |
Primers |
TRINITY_DN13076_c3_g2_i2 |
Mononucleotide |
(A)11 |
11 |
2669 |
2679 |
1 |
7657186 |
7652968 |
Primers |
TRINITY_DN13076_c3_g2_i2 |
Tetranucleotide |
(CAAA)5 |
20 |
2805 |
2824 |
1 |
7657186 |
7652968 |
Primers |
TRINITY_DN11947_c1_g1_i15 |
Mononucleotide |
(T)11 |
11 |
2591 |
2601 |
3 |
4914185 |
4916932 |
Primers |
TRINITY_DN11947_c1_g1_i15 |
Mononucleotide |
(A)10 |
10 |
4064 |
4073 |
3 |
4914185 |
4916932 |
Primers |
TRINITY_DN13002_c0_g1_i10 |
Mononucleotide |
(A)14 |
14 |
999 |
1012 |
6 |
17131052 |
17133133 |
Primers |
TRINITY_DN13002_c0_g1_i10 |
Compound |
(A)10t(A)11 |
22 |
2067 |
2088 |
6 |
17131052 |
17133133 |
Primers |
TRINITY_DN13002_c0_g1_i10 |
Mononucleotide |
(A)13 |
13 |
3872 |
3884 |
6 |
17131052 |
17133133 |
Primers |
TRINITY_DN12883_c1_g2_i3 |
Trinucleotide |
(GAA)14 |
42 |
1791 |
1832 |
7 |
14007145 |
14004731 |
Primers |
TRINITY_DN12883_c1_g2_i3 |
Dinucleotide |
(GT)7 |
14 |
2638 |
2651 |
7 |
14007145 |
14004731 |
Primers |
TRINITY_DN12883_c1_g2_i3 |
Mononucleotide |
(A)14 |
14 |
3971 |
3984 |
7 |
14007145 |
14004731 |
Primers |
TRINITY_DN12717_c5_g1_i5 |
Dinucleotide |
(GA)10 |
20 |
1221 |
1240 |
2 |
1417293 |
1421817 |
Primers |
TRINITY_DN12717_c5_g1_i5 |
Trinucleotide |
(GAA)6 |
18 |
5474 |
5491 |
2 |
1417293 |
1421817 |
Primers |
TRINITY_DN14273_c2_g1_i3 |
Dinucleotide |
(AT)6 |
12 |
3598 |
3609 |
6 |
10538073 |
10534957 |
Primers |
TRINITY_DN13608_c0_g1_i5 |
Mononucleotide |
(T)15 |
15 |
3954 |
3968 |
7 |
3677506 |
3680579 |
Primers |
TRINITY_DN13608_c0_g1_i5 |
Mononucleotide |
(A)13 |
13 |
5350 |
5362 |
7 |
3677506 |
3680579 |
Primers |
TRINITY_DN14353_c5_g1_i5 |
Mononucleotide |
(A)10 |
10 |
354 |
363 |
2 |
2117620 |
2112055 |
Primers |
TRINITY_DN14353_c5_g1_i5 |
Mononucleotide |
(A)14 |
14 |
616 |
629 |
2 |
2117620 |
2112055 |
Primers |
TRINITY_DN14361_c2_g1_i2 |
Mononucleotide |
(T)13 |
13 |
541 |
553 |
3 |
36267569 |
36263807 |
Primers |
TRINITY_DN14361_c2_g1_i2 |
Mononucleotide |
(T)10 |
10 |
711 |
720 |
3 |
36267569 |
36263807 |
Primers |
TRINITY_DN14361_c2_g1_i2 |
Mononucleotide |
(T)10 |
10 |
1778 |
1787 |
3 |
36267569 |
36263807 |
Primers |
TRINITY_DN13196_c0_g1_i18 |
Trinucleotide |
(CCG)6 |
18 |
140 |
157 |
2 |
5320251 |
5322051 |
Primers |
TRINITY_DN12725_c0_g1_i4 |
Mononucleotide |
(T)11 |
11 |
200 |
210 |
7 |
15353073 |
15356779 |
Primers |
TRINITY_DN12725_c0_g1_i4 |
Mononucleotide |
(A)11 |
11 |
2983 |
2993 |
7 |
15353073 |
15356779 |
Primers |
TRINITY_DN12725_c0_g1_i4 |
Compound |
(A)10ccattgaaatggata(AT)6 |
37 |
3552 |
3588 |
7 |
15353073 |
15356779 |
Primers |
TRINITY_DN10746_c0_g1_i4 |
Mononucleotide |
(T)10 |
10 |
5539 |
5548 |
3 |
694452 |
697940 |
Primers |
TRINITY_DN12534_c2_g1_i3 |
Mononucleotide |
(T)16 |
16 |
2840 |
2855 |
1 |
4191991 |
4189522 |
Primers |
TRINITY_DN12462_c0_g3_i3 |
Mononucleotide |
(T)10 |
10 |
480 |
489 |
5 |
26447188 |
26444427 |
Primers |
TRINITY_DN12680_c1_g1_i15 |
Trinucleotide |
(TTC)15 |
45 |
8 |
52 |
6 |
6337803 |
6343318 |
Primers |
TRINITY_DN10939_c0_g1_i3 |
Mononucleotide |
(T)11 |
11 |
2064 |
2074 |
1 |
12563223 |
12559330 |
Primers |
TRINITY_DN11565_c3_g1_i2 |
Mononucleotide |
(A)12 |
12 |
824 |
835 |
1 |
26171208 |
26174769 |
Primers |
TRINITY_DN14168_c1_g3_i4 |
Mononucleotide |
(T)10 |
10 |
1784 |
1793 |
2 |
16139582 |
16134011 |
Primers |
TRINITY_DN13257_c0_g1_i6 |
Dinucleotide |
(TG)8 |
16 |
4294 |
4309 |
4 |
13669032 |
13666221 |
Primers |
TRINITY_DN13257_c0_g1_i6 |
Mononucleotide |
(A)23 |
23 |
4935 |
4957 |
4 |
13669032 |
13666221 |
Primers |
TRINITY_DN14454_c1_g1_i26 |
Mononucleotide |
(A)10 |
10 |
1339 |
1348 |
6 |
20072584 |
20070703 |
Primers |
TRINITY_DN14454_c1_g1_i26 |
Mononucleotide |
(T)18 |
18 |
3694 |
3711 |
6 |
20072584 |
20070703 |
Primers |
TRINITY_DN10018_c0_g1_i3 |
Mononucleotide |
(T)13 |
13 |
396 |
408 |
5 |
24839830 |
24843851 |
Primers |
TRINITY_DN12647_c5_g1_i1 |
Mononucleotide |
(T)11 |
11 |
602 |
612 |
7 |
907665 |
903625 |
Primers |
TRINITY_DN12647_c5_g1_i1 |
Dinucleotide |
(AT)11 |
22 |
2265 |
2286 |
7 |
907665 |
903625 |
Primers |
TRINITY_DN12343_c2_g1_i11 |
Mononucleotide |
(A)10 |
10 |
5470 |
5479 |
6 |
21301754 |
21304202 |
Primers |
TRINITY_DN12509_c0_g1_i15 |
Mononucleotide |
(T)15 |
15 |
520 |
534 |
3 |
27187579 |
27191021 |
Primers |
TRINITY_DN12517_c1_g1_i2 |
Mononucleotide |
(A)13 |
13 |
3407 |
3419 |
1 |
2636737 |
2635143 |
Primers |
TRINITY_DN13585_c4_g3_i1 |
Mononucleotide |
(T)18 |
18 |
22 |
39 |
2 |
2987169 |
2992721 |
Primers |
TRINITY_DN13558_c0_g1_i10 |
Trinucleotide |
(TGC)5 |
15 |
855 |
869 |
5 |
3387050 |
3389830 |
Primers |
TRINITY_DN13473_c2_g2_i10 |
Compound |
(TTC)6tttttttcc(T)12 |
39 |
192 |
230 |
3 |
10889236 |
10894080 |
Primers |
TRINITY_DN13473_c2_g2_i10 |
Dinucleotide |
(CT)9 |
18 |
1364 |
1381 |
3 |
10889236 |
10894080 |
Primers |
TRINITY_DN12869_c0_g1_i22 |
Hexanucleotide |
(GCCTCT)6 |
36 |
93 |
128 |
4 |
10606820 |
10604698 |
Primers |
TRINITY_DN12869_c0_g1_i22 |
Dinucleotide |
(AG)6 |
12 |
2876 |
2887 |
4 |
10606820 |
10604698 |
Primers |
TRINITY_DN12869_c0_g1_i22 |
Mononucleotide |
(A)12 |
12 |
4909 |
4920 |
4 |
10606820 |
10604698 |
Primers |
TRINITY_DN12631_c0_g1_i12 |
Mononucleotide |
(T)11 |
11 |
1594 |
1604 |
3 |
8341802 |
8342847 |
Primers |
TRINITY_DN12778_c3_g4_i13 |
Trinucleotide |
(TCC)5 |
15 |
823 |
837 |
3 |
26360790 |
26359305 |
Primers |
TRINITY_DN12778_c3_g4_i13 |
Dinucleotide |
(AG)9 |
18 |
5495 |
5512 |
3 |
26360790 |
26359305 |
Primers |
TRINITY_DN11115_c0_g1_i14 |
Mononucleotide |
(A)12 |
12 |
17 |
28 |
6 |
23388676 |
23391044 |
Primers |
TRINITY_DN11115_c0_g1_i14 |
Dinucleotide |
(CT)7 |
14 |
4450 |
4463 |
6 |
23388676 |
23391044 |
Primers |
TRINITY_DN13357_c0_g1_i19 |
Mononucleotide |
(A)12 |
12 |
1641 |
1652 |
6 |
18214518 |
18210993 |
Primers |
TRINITY_DN13357_c0_g1_i19 |
Mononucleotide |
(A)10 |
10 |
2304 |
2313 |
6 |
18214518 |
18210993 |
Primers |
TRINITY_DN12154_c0_g1_i2 |
Tetranucleotide |
(GAAA)6 |
24 |
5497 |
5520 |
5 |
20189178 |
20186238 |
Primers |
TRINITY_DN12712_c0_g1_i13 |
Tetranucleotide |
(AAAT)5 |
20 |
24 |
43 |
7 |
18870764 |
18868396 |
Primers |
TRINITY_DN11612_c3_g2_i14 |
Compound |
(TC)6tattcccctctgtttttttctctctattctacacatttcttttcttttccg(T)11 |
74 |
264 |
337 |
5 |
2581546 |
2579549 |
Primers |
TRINITY_DN11612_c3_g2_i14 |
Mononucleotide |
(T)12 |
12 |
4563 |
4574 |
5 |
2581546 |
2579549 |
Primers |
TRINITY_DN13632_c4_g1_i8 |
Dinucleotide |
(CA)7 |
14 |
2376 |
2389 |
3 |
13469474 |
13473754 |
Primers |
TRINITY_DN13632_c4_g1_i8 |
Mononucleotide |
(T)10 |
10 |
4652 |
4661 |
3 |
13469474 |
13473754 |
Primers |
TRINITY_DN13766_c1_g3_i12 |
Compound |
(A)12cag(A)11gaaacccagaaagc(A)14 |
54 |
5480 |
5533 |
7 |
18695995 |
18698504 |
Primers |
TRINITY_DN14724_c4_g2_i3 |
Mononucleotide |
(T)10 |
10 |
5321 |
5330 |
4 |
19225639 |
19228775 |
Primers |
TRINITY_DN11583_c1_g2_i3 |
Mononucleotide |
(A)10 |
10 |
144 |
153 |
7 |
13913383 |
13911264 |
Primers |
TRINITY_DN13342_c1_g1_i2 |
Compound |
(T)12ggtttc(T)17 |
35 |
248 |
282 |
4 |
10900816 |
10906344 |
Primers |
TRINITY_DN13342_c1_g1_i2 |
Mononucleotide |
(T)15 |
15 |
458 |
472 |
4 |
10900816 |
10906344 |
Primers |
TRINITY_DN13342_c1_g1_i2 |
Mononucleotide |
(T)14 |
14 |
1474 |
1487 |
4 |
10900816 |
10906344 |
Primers |
TRINITY_DN13342_c1_g1_i2 |
Mononucleotide |
(T)11 |
11 |
2196 |
2206 |
4 |
10900816 |
10906344 |
Primers |
TRINITY_DN13342_c1_g1_i2 |
Trinucleotide |
(GGA)10 |
30 |
5499 |
5528 |
4 |
10900816 |
10906344 |
Primers |
TRINITY_DN12636_c5_g3_i12 |
Mononucleotide |
(A)10 |
10 |
1521 |
1530 |
3 |
280700 |
282427 |
Primers |
TRINITY_DN12636_c5_g3_i12 |
Mononucleotide |
(T)10 |
10 |
3537 |
3546 |
3 |
280700 |
282427 |
Primers |
TRINITY_DN12983_c0_g3_i7 |
Mononucleotide |
(A)19 |
19 |
53 |
71 |
2 |
5291499 |
5293332 |
Primers |
TRINITY_DN12983_c0_g3_i7 |
Trinucleotide |
(AGA)16 |
48 |
308 |
355 |
2 |
5291499 |
5293332 |
Primers |
TRINITY_DN14456_c0_g1_i11 |
Dinucleotide |
(GA)6 |
12 |
4501 |
4512 |
Scaffold000247 |
506 |
4422 |
Primers |
TRINITY_DN14456_c0_g1_i11 |
Mononucleotide |
(A)11 |
11 |
4645 |
4655 |
Scaffold000247 |
506 |
4422 |
Primers |
TRINITY_DN14456_c0_g1_i11 |
Mononucleotide |
(A)10 |
10 |
5413 |
5422 |
Scaffold000247 |
506 |
4422 |
Primers |
TRINITY_DN12188_c2_g4_i11 |
Tetranucleotide |
(ATAC)8 |
32 |
1 |
32 |
7 |
12975721 |
12970212 |
Primers |
TRINITY_DN12188_c2_g4_i11 |
Mononucleotide |
(T)10 |
10 |
2713 |
2722 |
7 |
12975721 |
12970212 |
Primers |
TRINITY_DN12188_c2_g4_i11 |
Dinucleotide |
(GA)8 |
16 |
4406 |
4421 |
7 |
12975721 |
12970212 |
Primers |
TRINITY_DN12188_c2_g4_i11 |
Mononucleotide |
(T)22 |
22 |
5492 |
5513 |
7 |
12975721 |
12970212 |
Primers |
TRINITY_DN13904_c2_g2_i16 |
Dinucleotide |
(GA)9 |
18 |
5345 |
5362 |
2 |
5689272 |
5690484 |
Primers |
TRINITY_DN14292_c2_g2_i21 |
Mononucleotide |
(A)13 |
13 |
1374 |
1386 |
4 |
1077376 |
1075708 |
Primers |
TRINITY_DN14292_c2_g2_i21 |
Compound |
(TCT)6ccttcttcttcttttctctctcctaagcttatctctctctttctctctcc(CT)8 |
84 |
5400 |
5483 |
4 |
1077376 |
1075708 |
Primers |
TRINITY_DN13321_c0_g1_i16 |
Dinucleotide |
(AC)11 |
22 |
1014 |
1035 |
6 |
28208705 |
28206046 |
Primers |
TRINITY_DN13330_c0_g2_i3 |
Compound |
(GA)7aaaagaaagagactacaaaaagtagagagt(GA)6 |
56 |
5233 |
5288 |
6 |
3953667 |
3959021 |
Primers |
TRINITY_DN14584_c4_g8_i2 |
Mononucleotide |
(A)11 |
11 |
1822 |
1832 |
3 |
31506930 |
31512439 |
Primers |
TRINITY_DN12697_c1_g1_i2 |
Dinucleotide |
(TC)10 |
20 |
59 |
78 |
3 |
5785536 |
5781834 |
Primers |
TRINITY_DN12697_c1_g1_i2 |
Mononucleotide |
(A)11 |
11 |
4584 |
4594 |
3 |
5785536 |
5781834 |
Primers |
TRINITY_DN12697_c1_g1_i2 |
Mononucleotide |
(T)10 |
10 |
5159 |
5168 |
3 |
5785536 |
5781834 |
Primers |
TRINITY_DN12731_c0_g1_i1 |
Mononucleotide |
(A)10 |
10 |
2721 |
2730 |
5 |
16467749 |
16473274 |
Primers |
TRINITY_DN10938_c0_g1_i2 |
Dinucleotide |
(GT)7 |
14 |
2308 |
2321 |
1 |
4983979 |
4981403 |
Primers |
TRINITY_DN12723_c0_g1_i18 |
Dinucleotide |
(AT)6 |
12 |
187 |
198 |
3 |
38866189 |
38864095 |
Primers |
TRINITY_DN12723_c0_g1_i18 |
Mononucleotide |
(T)11 |
11 |
5487 |
5497 |
3 |
38866189 |
38864095 |
Primers |
TRINITY_DN12965_c0_g1_i2 |
Compound |
(TCT)6tcctctttgtgagtcttatgatgatgaatcataaaataaaatattagttaaaggaaaatctcaaccccacaccatttgtcgccc(TCT)6 |
120 |
75 |
194 |
6 |
26650355 |
26655158 |
Primers |
TRINITY_DN12965_c0_g1_i2 |
Dinucleotide |
(TA)6 |
12 |
2210 |
2221 |
6 |
26650355 |
26655158 |
Primers |
TRINITY_DN12965_c0_g1_i2 |
Trinucleotide |
(TGC)5 |
15 |
3508 |
3522 |
6 |
26650355 |
26655158 |
Primers |
TRINITY_DN12965_c0_g1_i2 |
Mononucleotide |
(T)10 |
10 |
3842 |
3851 |
6 |
26650355 |
26655158 |
Primers |
TRINITY_DN14174_c1_g1_i10 |
Mononucleotide |
(A)11 |
11 |
1111 |
1121 |
4 |
6319468 |
6320440 |
Primers |
TRINITY_DN10844_c0_g1_i7 |
Mononucleotide |
(A)12 |
12 |
4571 |
4582 |
1 |
1729618 |
1725689 |
Primers |
TRINITY_DN10844_c0_g1_i7 |
Mononucleotide |
(A)10 |
10 |
4985 |
4994 |
1 |
1729618 |
1725689 |
Primers |
TRINITY_DN12796_c0_g1_i4 |
Compound |
(AAAT)5ataaatatatatatacaaacacatgaatgaataatataataatg(ATA)5 |
79 |
80 |
158 |
3 |
33254402 |
33255571 |
Primers |
TRINITY_DN12393_c1_g4_i5 |
Mononucleotide |
(A)10 |
10 |
4667 |
4676 |
4 |
5397747 |
5402496 |
Primers |
TRINITY_DN12393_c1_g4_i5 |
Dinucleotide |
(AT)9 |
18 |
5002 |
5019 |
4 |
5397747 |
5402496 |
Primers |
TRINITY_DN12393_c1_g4_i5 |
Mononucleotide |
(A)10 |
10 |
5272 |
5281 |
4 |
5397747 |
5402496 |
Primers |
TRINITY_DN12393_c1_g4_i5 |
Dinucleotide |
(AG)7 |
14 |
5444 |
5457 |
4 |
5397747 |
5402496 |
Primers |
TRINITY_DN11498_c2_g1_i4 |
Trinucleotide |
(TAA)5 |
15 |
268 |
282 |
6 |
6252428 |
6249132 |
Primers |
TRINITY_DN11498_c2_g1_i4 |
Dinucleotide |
(AT)8 |
16 |
608 |
623 |
6 |
6252428 |
6249132 |
Primers |
TRINITY_DN11498_c2_g1_i4 |
Mononucleotide |
(A)10 |
10 |
2567 |
2576 |
6 |
6252428 |
6249132 |
Primers |
TRINITY_DN11498_c2_g1_i4 |
Dinucleotide |
(TA)6 |
12 |
2873 |
2884 |
6 |
6252428 |
6249132 |
Primers |
TRINITY_DN11498_c2_g1_i4 |
Trinucleotide |
(AGA)5 |
15 |
3275 |
3289 |
6 |
6252428 |
6249132 |
Primers |
TRINITY_DN11498_c2_g1_i4 |
Dinucleotide |
(TG)7 |
14 |
5299 |
5312 |
6 |
6252428 |
6249132 |
Primers |
TRINITY_DN10234_c0_g1_i6 |
Mononucleotide |
(T)10 |
10 |
392 |
401 |
2 |
1513473 |
1508043 |
Primers |
TRINITY_DN10234_c0_g1_i6 |
Mononucleotide |
(A)11 |
11 |
1472 |
1482 |
2 |
1513473 |
1508043 |
Primers |
TRINITY_DN10234_c0_g1_i6 |
Mononucleotide |
(A)11 |
11 |
4353 |
4363 |
2 |
1513473 |
1508043 |
Primers |
TRINITY_DN13687_c1_g1_i5 |
Mononucleotide |
(T)14 |
14 |
1738 |
1751 |
2 |
20930393 |
20933704 |
Primers |
TRINITY_DN11897_c2_g3_i3 |
Mononucleotide |
(T)11 |
11 |
192 |
202 |
5 |
5070629 |
5074425 |
Primers |
TRINITY_DN10977_c0_g1_i19 |
Trinucleotide |
(AGA)5 |
15 |
1898 |
1912 |
5 |
6097771 |
6099695 |
Primers |
TRINITY_DN10977_c0_g1_i19 |
Trinucleotide |
(TGC)5 |
15 |
2021 |
2035 |
5 |
6097771 |
6099695 |
Primers |
TRINITY_DN14105_c0_g2_i19 |
Mononucleotide |
(T)29 |
29 |
1 |
29 |
3 |
74744 |
72580 |
Primers |
TRINITY_DN14517_c0_g1_i10 |
Mononucleotide |
(T)16 |
16 |
117 |
132 |
5 |
419995 |
414588 |
Primers |
TRINITY_DN11579_c1_g1_i4 |
Mononucleotide |
(A)11 |
11 |
1671 |
1681 |
2 |
17415720 |
17420468 |
Primers |
TRINITY_DN11579_c1_g1_i4 |
Dinucleotide |
(TA)7 |
14 |
3373 |
3386 |
2 |
17415720 |
17420468 |
Primers |
TRINITY_DN11163_c1_g1_i2 |
Mononucleotide |
(T)10 |
10 |
1852 |
1861 |
5 |
26751675 |
26746180 |
Primers |
TRINITY_DN11163_c1_g1_i2 |
Dinucleotide |
(CT)7 |
14 |
4860 |
4873 |
5 |
26751675 |
26746180 |
Primers |
TRINITY_DN10254_c0_g1_i7 |
Mononucleotide |
(T)13 |
13 |
460 |
472 |
3 |
38024897 |
38028097 |
Primers |
TRINITY_DN10254_c0_g1_i7 |
Mononucleotide |
(T)10 |
10 |
1486 |
1495 |
3 |
38024897 |
38028097 |
Primers |
TRINITY_DN12345_c0_g1_i19 |
Dinucleotide |
(AT)10 |
20 |
1832 |
1851 |
6 |
24208720 |
24203248 |
Primers |
TRINITY_DN11488_c0_g3_i4 |
Mononucleotide |
(A)12 |
12 |
2788 |
2799 |
5 |
10810481 |
10806778 |
Primers |
TRINITY_DN11488_c0_g3_i4 |
Dinucleotide |
(AG)6 |
12 |
4125 |
4136 |
5 |
10810481 |
10806778 |
Primers |
TRINITY_DN10978_c0_g1_i13 |
Dinucleotide |
(AT)11 |
22 |
2726 |
2747 |
6 |
25719328 |
25720970 |
Primers |
TRINITY_DN12370_c0_g3_i2 |
Mononucleotide |
(A)11 |
11 |
117 |
127 |
6 |
28892921 |
28889424 |
Primers |
TRINITY_DN13276_c4_g1_i13 |
Dinucleotide |
(GA)7 |
14 |
725 |
738 |
3 |
12076351 |
12077886 |
Primers |
TRINITY_DN13276_c4_g1_i13 |
Dinucleotide |
(GA)8 |
16 |
1399 |
1414 |
3 |
12076351 |
12077886 |
Primers |
TRINITY_DN13276_c4_g1_i13 |
Dinucleotide |
(AG)6 |
12 |
4057 |
4068 |
3 |
12076351 |
12077886 |
Primers |
TRINITY_DN12375_c0_g5_i20 |
Mononucleotide |
(A)11 |
11 |
5032 |
5042 |
3 |
21701893 |
21706095 |
Primers |
TRINITY_DN8705_c0_g1_i3 |
Mononucleotide |
(T)12 |
12 |
34 |
45 |
2 |
8158114 |
8163578 |
Primers |
TRINITY_DN8705_c0_g1_i3 |
Mononucleotide |
(T)10 |
10 |
264 |
273 |
2 |
8158114 |
8163578 |
Primers |
TRINITY_DN8705_c0_g1_i3 |
Mononucleotide |
(T)12 |
12 |
428 |
439 |
2 |
8158114 |
8163578 |
Primers |
TRINITY_DN9384_c0_g1_i1 |
Compound |
(TTA)6tttgtttgaattgttaatgtttttggtttgatgtgg(T)17 |
71 |
406 |
476 |
7 |
648364 |
644495 |
Primers |
TRINITY_DN14481_c0_g4_i5 |
Dinucleotide |
(AT)6 |
12 |
99 |
110 |
6 |
5802401 |
5798235 |
Primers |
TRINITY_DN14481_c0_g4_i5 |
Mononucleotide |
(A)11 |
11 |
2257 |
2267 |
6 |
5802401 |
5798235 |
Primers |
TRINITY_DN14481_c0_g4_i5 |
Trinucleotide |
(TTC)5 |
15 |
4885 |
4899 |
6 |
5802401 |
5798235 |
Primers |
TRINITY_DN14481_c0_g4_i5 |
Mononucleotide |
(T)13 |
13 |
5386 |
5398 |
6 |
5802401 |
5798235 |
Primers |
TRINITY_DN11996_c1_g6_i4 |
Mononucleotide |
(T)12 |
12 |
1831 |
1842 |
2 |
14681684 |
14678541 |
Primers |
TRINITY_DN11996_c1_g6_i4 |
Mononucleotide |
(A)12 |
12 |
1969 |
1980 |
2 |
14681684 |
14678541 |
Primers |
TRINITY_DN11996_c1_g6_i4 |
Mononucleotide |
(A)12 |
12 |
2694 |
2705 |
2 |
14681684 |
14678541 |
Primers |
TRINITY_DN12102_c1_g1_i10 |
Dinucleotide |
(CT)13 |
26 |
60 |
85 |
4 |
14214948 |
14217597 |
Primers |
TRINITY_DN12102_c1_g1_i10 |
Dinucleotide |
(AG)11 |
22 |
5435 |
5456 |
4 |
14214948 |
14217597 |
Primers |
TRINITY_DN14603_c2_g2_i6 |
Mononucleotide |
(A)14 |
14 |
5120 |
5133 |
7 |
16685237 |
16688386 |
Primers |
TRINITY_DN14603_c2_g2_i6 |
Mononucleotide |
(A)12 |
12 |
5393 |
5404 |
7 |
16685237 |
16688386 |
Primers |
TRINITY_DN11408_c1_g6_i1 |
Mononucleotide |
(A)10 |
10 |
2496 |
2505 |
4 |
19425900 |
19423694 |
Primers |
TRINITY_DN11408_c1_g6_i1 |
Mononucleotide |
(T)10 |
10 |
3011 |
3020 |
4 |
19425900 |
19423694 |
Primers |
TRINITY_DN11408_c1_g6_i1 |
Mononucleotide |
(A)15 |
15 |
5144 |
5158 |
4 |
19425900 |
19423694 |
Primers |
TRINITY_DN13683_c2_g1_i18 |
Mononucleotide |
(T)10 |
10 |
1752 |
1761 |
2 |
8956910 |
8958250 |
Primers |
TRINITY_DN13530_c3_g11_i1 |
Mononucleotide |
(A)16 |
16 |
2575 |
2590 |
4 |
3107956 |
3113351 |
Primers |
TRINITY_DN13530_c3_g11_i1 |
Compound |
(TA)15tttatttg(TA)9 |
56 |
5358 |
5413 |
4 |
3107956 |
3113351 |
Primers |
TRINITY_DN11185_c0_g1_i10 |
Mononucleotide |
(A)10 |
10 |
5213 |
5222 |
1 |
7338931 |
7342603 |
Primers |
TRINITY_DN13896_c1_g1_i18 |
Dinucleotide |
(AG)7 |
14 |
2286 |
2299 |
1 |
1370928 |
1372231 |
Primers |
TRINITY_DN13896_c1_g1_i18 |
Trinucleotide |
(GGT)5 |
15 |
4880 |
4894 |
1 |
1370928 |
1372231 |
Primers |
TRINITY_DN13896_c1_g1_i18 |
Mononucleotide |
(T)11 |
11 |
5401 |
5411 |
1 |
1370928 |
1372231 |
Primers |
TRINITY_DN10770_c1_g1_i1 |
Mononucleotide |
(A)10 |
10 |
3293 |
3302 |
1 |
2649562 |
2646783 |
Primers |
TRINITY_DN11699_c6_g1_i1 |
Mononucleotide |
(A)16 |
16 |
1856 |
1871 |
2 |
17077278 |
17082719 |
Primers |
TRINITY_DN11699_c6_g1_i1 |
Mononucleotide |
(T)10 |
10 |
2341 |
2350 |
2 |
17077278 |
17082719 |
Primers |
TRINITY_DN11699_c6_g1_i1 |
Dinucleotide |
(GA)7 |
14 |
3250 |
3263 |
2 |
17077278 |
17082719 |
Primers |
TRINITY_DN13585_c4_g1_i1 |
Mononucleotide |
(T)18 |
18 |
255 |
272 |
2 |
22743256 |
22748150 |
Primers |
TRINITY_DN13585_c4_g1_i1 |
Mononucleotide |
(A)10 |
10 |
3159 |
3168 |
2 |
22743256 |
22748150 |
Primers |
TRINITY_DN13650_c1_g1_i21 |
Mononucleotide |
(A)11 |
11 |
5418 |
5428 |
3 |
795552 |
797454 |
Primers |
TRINITY_DN11304_c1_g2_i2 |
Mononucleotide |
(A)11 |
11 |
1729 |
1739 |
5 |
23334453 |
23338998 |
Primers |
TRINITY_DN10145_c0_g1_i16 |
Mononucleotide |
(T)13 |
13 |
5361 |
5373 |
3 |
32321930 |
32326197 |
Primers |
TRINITY_DN11805_c0_g1_i9 |
Mononucleotide |
(A)11 |
11 |
4442 |
4452 |
1 |
7664507 |
7661905 |
Primers |
TRINITY_DN11604_c0_g1_i15 |
Mononucleotide |
(A)13 |
13 |
4656 |
4668 |
3 |
9675380 |
9678271 |
Primers |
TRINITY_DN9574_c0_g1_i7 |
Mononucleotide |
(A)10 |
10 |
3129 |
3138 |
3 |
2405547 |
2402540 |
Primers |
TRINITY_DN12576_c2_g6_i2 |
Hexanucleotide |
(CCCACA)5 |
30 |
4933 |
4962 |
4 |
3081004 |
3085018 |
Primers |
TRINITY_DN11572_c1_g1_i3 |
Trinucleotide |
(CTT)6 |
18 |
62 |
79 |
3 |
23651979 |
23656447 |
Primers |
TRINITY_DN12229_c1_g1_i4 |
Mononucleotide |
(A)10 |
10 |
4621 |
4630 |
4 |
18734706 |
18730824 |
Primers |
TRINITY_DN13607_c0_g1_i2 |
Mononucleotide |
(T)10 |
10 |
4805 |
4814 |
7 |
17881509 |
17883634 |
Primers |
TRINITY_DN13607_c0_g1_i2 |
Mononucleotide |
(A)22 |
22 |
5362 |
5383 |
7 |
17881509 |
17883634 |
Primers |
TRINITY_DN14202_c2_g1_i11 |
Compound |
(A)11c(A)10 |
22 |
108 |
129 |
7 |
1242035 |
1239955 |
Primers |
TRINITY_DN14202_c2_g1_i11 |
Trinucleotide |
(TTG)5 |
15 |
238 |
252 |
7 |
1242035 |
1239955 |
Primers |
TRINITY_DN14202_c2_g1_i11 |
Mononucleotide |
(T)12 |
12 |
560 |
571 |
7 |
1242035 |
1239955 |
Primers |
TRINITY_DN14202_c2_g1_i11 |
Mononucleotide |
(A)19 |
19 |
2680 |
2698 |
7 |
1242035 |
1239955 |
Primers |
TRINITY_DN13244_c1_g2_i11 |
Compound |
(A)25ccaaaaac(A)21 |
54 |
1 |
54 |
4 |
21431885 |
21436147 |
Primers |
TRINITY_DN13244_c1_g2_i11 |
Dinucleotide |
(AG)9 |
18 |
4200 |
4217 |
4 |
21431885 |
21436147 |
Primers |
TRINITY_DN14108_c2_g4_i12 |
Dinucleotide |
(GA)7 |
14 |
3011 |
3024 |
4 |
69626 |
67747 |
Primers |
TRINITY_DN12541_c1_g1_i13 |
Mononucleotide |
(T)10 |
10 |
107 |
116 |
1 |
8835566 |
8837678 |
Primers |
TRINITY_DN11473_c1_g4_i10 |
Mononucleotide |
(A)10 |
10 |
3776 |
3785 |
4 |
18141230 |
18139503 |
Primers |
TRINITY_DN13138_c3_g2_i18 |
Mononucleotide |
(A)22 |
22 |
4343 |
4364 |
4 |
9685395 |
9683043 |
Primers |
TRINITY_DN13138_c3_g2_i18 |
Mononucleotide |
(A)13 |
13 |
5149 |
5161 |
4 |
9685395 |
9683043 |
Primers |
TRINITY_DN13252_c1_g1_i3 |
Mononucleotide |
(T)12 |
12 |
267 |
278 |
4 |
5124103 |
5120029 |
Primers |
TRINITY_DN13252_c1_g1_i3 |
Mononucleotide |
(A)13 |
13 |
5332 |
5344 |
4 |
5124103 |
5120029 |
Primers |
TRINITY_DN13836_c4_g1_i8 |
Mononucleotide |
(T)11 |
11 |
74 |
84 |
3 |
27914148 |
27916372 |
Primers |
TRINITY_DN13836_c4_g1_i8 |
Trinucleotide |
(CTC)5 |
15 |
5218 |
5232 |
3 |
27914148 |
27916372 |
Primers |
TRINITY_DN13836_c4_g1_i8 |
Dinucleotide |
(AG)16 |
32 |
5352 |
5383 |
3 |
27914148 |
27916372 |
Primers |
TRINITY_DN10889_c0_g1_i13 |
Mononucleotide |
(A)13 |
13 |
4492 |
4504 |
1 |
22208511 |
22211223 |
Primers |
TRINITY_DN13595_c0_g1_i7 |
Dinucleotide |
(TC)8 |
16 |
584 |
599 |
4 |
1889769 |
1891335 |
Primers |
TRINITY_DN13595_c0_g1_i7 |
Mononucleotide |
(T)11 |
11 |
3267 |
3277 |
4 |
1889769 |
1891335 |
Primers |
TRINITY_DN12250_c1_g1_i16 |
Trinucleotide |
(GAA)5 |
15 |
1027 |
1041 |
3 |
13645167 |
13647295 |
Primers |
TRINITY_DN13701_c0_g1_i10 |
Mononucleotide |
(T)10 |
10 |
1790 |
1799 |
2 |
633136 |
635380 |
Primers |
TRINITY_DN11993_c0_g1_i9 |
Pentanucleotide |
(GAAAG)5 |
25 |
5330 |
5354 |
2 |
14354846 |
14352816 |
Primers |
TRINITY_DN14248_c1_g2_i13 |
Mononucleotide |
(A)11 |
11 |
503 |
513 |
6 |
1080658 |
1084006 |
Primers |
TRINITY_DN14377_c1_g1_i11 |
Dinucleotide |
(AT)6 |
12 |
12 |
23 |
6 |
25573531 |
25572050 |
Primers |
TRINITY_DN14377_c1_g1_i11 |
Dinucleotide |
(AT)9 |
18 |
552 |
569 |
6 |
25573531 |
25572050 |
Primers |
TRINITY_DN14377_c1_g1_i11 |
Dinucleotide |
(AG)6 |
12 |
5244 |
5255 |
6 |
25573531 |
25572050 |
Primers |
TRINITY_DN13106_c0_g3_i17 |
Mononucleotide |
(T)12 |
12 |
448 |
459 |
6 |
11692578 |
11695427 |
Primers |
TRINITY_DN13106_c0_g3_i17 |
Mononucleotide |
(A)10 |
10 |
2799 |
2808 |
6 |
11692578 |
11695427 |
Primers |
TRINITY_DN13106_c0_g3_i17 |
Mononucleotide |
(A)10 |
10 |
3210 |
3219 |
6 |
11692578 |
11695427 |
Primers |
TRINITY_DN12555_c1_g1_i16 |
Mononucleotide |
(T)10 |
10 |
99 |
108 |
6 |
2798825 |
2804187 |
Primers |
TRINITY_DN12555_c1_g1_i16 |
Mononucleotide |
(T)10 |
10 |
1009 |
1018 |
6 |
2798825 |
2804187 |
Primers |
TRINITY_DN12555_c1_g1_i16 |
Mononucleotide |
(A)16 |
16 |
4368 |
4383 |
6 |
2798825 |
2804187 |
Primers |
TRINITY_DN13371_c2_g1_i2 |
Trinucleotide |
(AAG)5 |
15 |
5285 |
5299 |
3 |
35150961 |
35152666 |
Primers |
TRINITY_DN10384_c0_g1_i7 |
Mononucleotide |
(A)11 |
11 |
3296 |
3306 |
2 |
10971095 |
10973334 |
Primers |
TRINITY_DN14259_c1_g1_i4 |
Compound |
(TCT)5tcatcttcttcttcttcatcttcttcttccaattgaatccatggaaattttgcacaaacacagttggtttccttttctgagttgaatttct(TC)6 |
118 |
36 |
153 |
4 |
5688505 |
5691576 |
Primers |
TRINITY_DN14259_c1_g1_i4 |
Mononucleotide |
(T)10 |
10 |
1807 |
1816 |
4 |
5688505 |
5691576 |
Primers |
TRINITY_DN14259_c1_g1_i4 |
Mononucleotide |
(A)11 |
11 |
5186 |
5196 |
4 |
5688505 |
5691576 |
Primers |
TRINITY_DN14327_c0_g5_i2 |
Trinucleotide |
(CCA)5 |
15 |
4998 |
5012 |
1 |
1051952 |
1049384 |
Primers |
TRINITY_DN11058_c0_g1_i5 |
Dinucleotide |
(CT)9 |
18 |
5320 |
5337 |
3 |
9060434 |
9057821 |
Primers |
TRINITY_DN11145_c1_g1_i9 |
Mononucleotide |
(A)11 |
11 |
191 |
201 |
2 |
10940830 |
10942887 |
Primers |
TRINITY_DN11145_c1_g1_i9 |
Mononucleotide |
(A)10 |
10 |
3401 |
3410 |
2 |
10940830 |
10942887 |
Primers |
TRINITY_DN11145_c1_g1_i9 |
Trinucleotide |
(CTT)5 |
15 |
4985 |
4999 |
2 |
10940830 |
10942887 |
Primers |
TRINITY_DN12324_c1_g4_i1 |
Mononucleotide |
(T)11 |
11 |
204 |
214 |
6 |
24001131 |
23998870 |
Primers |
TRINITY_DN12324_c1_g4_i1 |
Trinucleotide |
(TAA)6 |
18 |
355 |
372 |
6 |
24001131 |
23998870 |
Primers |
TRINITY_DN11613_c0_g1_i1 |
Trinucleotide |
(TTA)5 |
15 |
1771 |
1785 |
5 |
21435360 |
21437384 |
Primers |
TRINITY_DN11613_c0_g1_i1 |
Mononucleotide |
(T)12 |
12 |
3610 |
3621 |
5 |
21435360 |
21437384 |
Primers |
TRINITY_DN12644_c2_g2_i17 |
Mononucleotide |
(T)14 |
14 |
5277 |
5290 |
3 |
8384573 |
8387235 |
Primers |
TRINITY_DN12083_c3_g2_i15 |
Mononucleotide |
(A)14 |
14 |
3498 |
3511 |
5 |
3460704 |
3464536 |
Primers |
TRINITY_DN12083_c3_g2_i15 |
Dinucleotide |
(AG)6 |
12 |
3763 |
3774 |
5 |
3460704 |
3464536 |
Primers |
TRINITY_DN12075_c1_g1_i12 |
Mononucleotide |
(A)10 |
10 |
4460 |
4469 |
4 |
6864752 |
6868111 |
Primers |
TRINITY_DN13817_c0_g1_i6 |
Trinucleotide |
(CTC)5 |
15 |
2547 |
2561 |
7 |
18258110 |
18255283 |
Primers |
TRINITY_DN13817_c0_g1_i6 |
Mononucleotide |
(A)17 |
17 |
4620 |
4636 |
7 |
18258110 |
18255283 |
Primers |
TRINITY_DN14144_c1_g2_i6 |
Mononucleotide |
(A)12 |
12 |
242 |
253 |
4 |
11046703 |
11044080 |
Primers |
TRINITY_DN12294_c1_g1_i16 |
Mononucleotide |
(A)10 |
10 |
972 |
981 |
2 |
5918626 |
5913291 |
Primers |
TRINITY_DN12294_c1_g1_i16 |
Compound |
(A)13ggaaaaaagg(A)13 |
36 |
4012 |
4047 |
2 |
5918626 |
5913291 |
Primers |
TRINITY_DN12294_c1_g1_i16 |
Mononucleotide |
(A)10 |
10 |
4880 |
4889 |
2 |
5918626 |
5913291 |
Primers |
TRINITY_DN12294_c1_g1_i16 |
Dinucleotide |
(AG)10 |
20 |
5192 |
5211 |
2 |
5918626 |
5913291 |
Primers |
TRINITY_DN12566_c0_g1_i10 |
Trinucleotide |
(CTT)6 |
18 |
124 |
141 |
6 |
6214717 |
6211852 |
Primers |
TRINITY_DN12566_c0_g1_i10 |
Trinucleotide |
(CGA)6 |
18 |
405 |
422 |
6 |
6214717 |
6211852 |
Primers |
TRINITY_DN12566_c0_g1_i10 |
Mononucleotide |
(A)11 |
11 |
1374 |
1384 |
6 |
6214717 |
6211852 |
Primers |
TRINITY_DN11766_c0_g1_i3 |
Mononucleotide |
(A)19 |
19 |
24 |
42 |
1 |
18296311 |
18292745 |
Primers |
TRINITY_DN11766_c0_g1_i3 |
Mononucleotide |
(A)10 |
10 |
1336 |
1345 |
1 |
18296311 |
18292745 |
Primers |
TRINITY_DN11766_c0_g1_i3 |
Compound |
(TAA)5(GAA)9 |
42 |
4658 |
4699 |
1 |
18296311 |
18292745 |
Primers |
TRINITY_DN12639_c1_g1_i6 |
Mononucleotide |
(T)16 |
16 |
1118 |
1133 |
6 |
3783738 |
3781752 |
Primers |
TRINITY_DN12639_c1_g1_i6 |
Mononucleotide |
(A)24 |
24 |
5266 |
5289 |
6 |
3783738 |
3781752 |
Primers |
TRINITY_DN12547_c0_g1_i5 |
Mononucleotide |
(T)11 |
11 |
658 |
668 |
5 |
1100501 |
1097150 |
Primers |
TRINITY_DN12547_c0_g1_i5 |
Tetranucleotide |
(TTTC)6 |
24 |
933 |
956 |
5 |
1100501 |
1097150 |
Primers |
TRINITY_DN12547_c0_g1_i5 |
Mononucleotide |
(T)11 |
11 |
2935 |
2945 |
5 |
1100501 |
1097150 |
Primers |
TRINITY_DN13912_c1_g1_i34 |
Mononucleotide |
(T)13 |
13 |
1469 |
1481 |
6 |
17781594 |
17780638 |
Primers |
TRINITY_DN12598_c3_g1_i5 |
Dinucleotide |
(TA)7 |
14 |
428 |
441 |
6 |
5227148 |
5224500 |
Primers |
TRINITY_DN12598_c3_g1_i5 |
Mononucleotide |
(A)12 |
12 |
3568 |
3579 |
6 |
5227148 |
5224500 |
Primers |
TRINITY_DN12598_c3_g1_i5 |
Mononucleotide |
(A)10 |
10 |
4909 |
4918 |
6 |
5227148 |
5224500 |
Primers |
TRINITY_DN11796_c0_g4_i6 |
Mononucleotide |
(A)11 |
11 |
4566 |
4576 |
6 |
28612782 |
28616343 |
Primers |
TRINITY_DN13080_c1_g6_i1 |
Mononucleotide |
(T)10 |
10 |
17 |
26 |
2 |
93414 |
98738 |
Primers |
TRINITY_DN13080_c1_g6_i1 |
Mononucleotide |
(T)15 |
15 |
2118 |
2132 |
2 |
93414 |
98738 |
Primers |
TRINITY_DN13080_c1_g6_i1 |
Mononucleotide |
(T)13 |
13 |
2504 |
2516 |
2 |
93414 |
98738 |
Primers |
TRINITY_DN13080_c1_g6_i1 |
Mononucleotide |
(A)15 |
15 |
3632 |
3646 |
2 |
93414 |
98738 |
Primers |
TRINITY_DN13080_c1_g6_i1 |
Mononucleotide |
(A)15 |
15 |
4376 |
4390 |
2 |
93414 |
98738 |
Primers |
TRINITY_DN12384_c1_g1_i6 |
Mononucleotide |
(A)14 |
14 |
277 |
290 |
2 |
20813553 |
20818875 |
Primers |
TRINITY_DN12384_c1_g1_i6 |
Mononucleotide |
(A)10 |
10 |
2714 |
2723 |
2 |
20813553 |
20818875 |
Primers |
TRINITY_DN12384_c1_g1_i6 |
Trinucleotide |
(TGA)7 |
21 |
4063 |
4083 |
2 |
20813553 |
20818875 |
Primers |
TRINITY_DN13777_c1_g1_i20 |
Dinucleotide |
(CT)7 |
14 |
19 |
32 |
6 |
21398301 |
21400014 |
Primers |
TRINITY_DN12834_c1_g1_i6 |
Mononucleotide |
(T)19 |
19 |
4728 |
4746 |
1 |
487143 |
483942 |
Primers |
TRINITY_DN11935_c3_g1_i11 |
Mononucleotide |
(T)13 |
13 |
135 |
147 |
2 |
19250990 |
19252751 |
Primers |
TRINITY_DN11935_c3_g1_i11 |
Trinucleotide |
(GCA)5 |
15 |
1975 |
1989 |
2 |
19250990 |
19252751 |
Primers |
TRINITY_DN11935_c3_g1_i11 |
Mononucleotide |
(A)14 |
14 |
2342 |
2355 |
2 |
19250990 |
19252751 |
Primers |
TRINITY_DN11935_c3_g1_i11 |
Mononucleotide |
(T)11 |
11 |
4495 |
4505 |
2 |
19250990 |
19252751 |
Primers |
TRINITY_DN13636_c1_g2_i16 |
Mononucleotide |
(T)14 |
14 |
1835 |
1848 |
6 |
6292924 |
6289240 |
Primers |
TRINITY_DN13636_c1_g2_i16 |
Mononucleotide |
(A)12 |
12 |
2933 |
2944 |
6 |
6292924 |
6289240 |
Primers |
TRINITY_DN13636_c1_g2_i16 |
Dinucleotide |
(TA)8 |
16 |
5284 |
5299 |
6 |
6292924 |
6289240 |
Primers |
TRINITY_DN11009_c0_g1_i5 |
Mononucleotide |
(A)10 |
10 |
1792 |
1801 |
3 |
36705248 |
36700969 |
Primers |
TRINITY_DN10653_c0_g1_i13 |
Mononucleotide |
(T)17 |
17 |
381 |
397 |
3 |
7126907 |
7132212 |
Primers |
TRINITY_DN10653_c0_g1_i13 |
Mononucleotide |
(A)10 |
10 |
5082 |
5091 |
3 |
7126907 |
7132212 |
Primers |
TRINITY_DN12551_c0_g3_i18 |
Mononucleotide |
(T)10 |
10 |
507 |
516 |
5 |
27798360 |
27800726 |
Primers |
TRINITY_DN12551_c0_g3_i18 |
Dinucleotide |
(GA)7 |
14 |
1848 |
1861 |
5 |
27798360 |
27800726 |
Primers |
TRINITY_DN11079_c3_g5_i6 |
Mononucleotide |
(A)10 |
10 |
4278 |
4287 |
6 |
22316023 |
22318857 |
Primers |
TRINITY_DN11079_c3_g5_i6 |
Mononucleotide |
(T)11 |
11 |
4981 |
4991 |
6 |
22316023 |
22318857 |
Primers |
TRINITY_DN11079_c3_g5_i6 |
Compound |
(C)10acttttatttatttacttttttttattcctcct(TC)9 |
61 |
5242 |
5302 |
6 |
22316023 |
22318857 |
Primers |
TRINITY_DN12436_c1_g1_i6 |
Dinucleotide |
(GA)7 |
14 |
5191 |
5204 |
6 |
28871533 |
28873563 |
Primers |
TRINITY_DN12275_c7_g1_i6 |
Compound |
(A)10gg(T)10 |
22 |
5266 |
5287 |
3 |
38697127 |
38700298 |
Primers |
TRINITY_DN11094_c0_g1_i15 |
Trinucleotide |
(ATT)5 |
15 |
4889 |
4903 |
6 |
10330161 |
10335423 |
Primers |
TRINITY_DN11094_c0_g1_i15 |
Mononucleotide |
(T)10 |
10 |
5178 |
5187 |
6 |
10330161 |
10335423 |
Primers |
TRINITY_DN14138_c1_g1_i9 |
Trinucleotide |
(GAC)5 |
15 |
808 |
822 |
7 |
4058454 |
4056892 |
Primers |
TRINITY_DN14138_c1_g1_i9 |
Mononucleotide |
(T)10 |
10 |
1877 |
1886 |
7 |
4058454 |
4056892 |
Primers |
TRINITY_DN13492_c1_g1_i1 |
Mononucleotide |
(A)15 |
15 |
5102 |
5116 |
2 |
16168035 |
16166341 |
Primers |
TRINITY_DN13483_c5_g1_i8 |
Dinucleotide |
(TA)6 |
12 |
181 |
192 |
5 |
16649260 |
16647709 |
Primers |
TRINITY_DN13483_c5_g1_i8 |
Dinucleotide |
(TC)6 |
12 |
2540 |
2551 |
5 |
16649260 |
16647709 |
Primers |
TRINITY_DN14165_c2_g2_i3 |
Mononucleotide |
(A)12 |
12 |
150 |
161 |
6 |
14722265 |
14718538 |
Primers |
TRINITY_DN14165_c2_g2_i3 |
Mononucleotide |
(A)12 |
12 |
1778 |
1789 |
6 |
14722265 |
14718538 |
Primers |
TRINITY_DN14165_c2_g2_i3 |
Mononucleotide |
(A)11 |
11 |
2243 |
2253 |
6 |
14722265 |
14718538 |
Primers |
TRINITY_DN14165_c2_g2_i3 |
Mononucleotide |
(T)12 |
12 |
2764 |
2775 |
6 |
14722265 |
14718538 |
Primers |
TRINITY_DN13923_c0_g4_i5 |
Compound |
(T)13c(T)11 |
25 |
432 |
456 |
3 |
8475826 |
8473432 |
Primers |
TRINITY_DN12750_c1_g2_i2 |
Dinucleotide |
(AG)7 |
14 |
1126 |
1139 |
6 |
26297873 |
26301235 |
Primers |
TRINITY_DN12750_c1_g2_i2 |
Mononucleotide |
(A)11 |
11 |
5265 |
5275 |
6 |
26297873 |
26301235 |
Primers |
TRINITY_DN12607_c2_g1_i1 |
Mononucleotide |
(A)18 |
18 |
1138 |
1155 |
3 |
31083789 |
31080849 |
Primers |
TRINITY_DN12290_c1_g1_i2 |
Trinucleotide |
(CTC)7 |
21 |
2410 |
2430 |
5 |
9741135 |
9744583 |
Primers |
TRINITY_DN12290_c1_g1_i2 |
Dinucleotide |
(AG)6 |
12 |
5188 |
5199 |
5 |
9741135 |
9744583 |
Primers |
TRINITY_DN12114_c0_g4_i7 |
Compound |
(T)11aag(A)13 |
27 |
135 |
161 |
2 |
17300132 |
17302488 |
Primers |
TRINITY_DN12208_c2_g1_i5 |
Compound |
(CTT)7catcttcttcttcttg(TC)6 |
49 |
54 |
102 |
5 |
19787443 |
19783835 |
Primers |
TRINITY_DN12208_c2_g1_i5 |
Trinucleotide |
(TTC)5 |
15 |
315 |
329 |
5 |
19787443 |
19783835 |
Primers |
TRINITY_DN12208_c2_g1_i5 |
Trinucleotide |
(GAT)5 |
15 |
890 |
904 |
5 |
19787443 |
19783835 |
Primers |
TRINITY_DN12208_c2_g1_i5 |
Trinucleotide |
(AAG)8 |
24 |
1383 |
1406 |
5 |
19787443 |
19783835 |
Primers |
TRINITY_DN12208_c2_g1_i5 |
Tetranucleotide |
(TTTC)6 |
24 |
3813 |
3836 |
5 |
19787443 |
19783835 |
Primers |
TRINITY_DN13620_c0_g2_i11 |
Mononucleotide |
(A)10 |
10 |
61 |
70 |
2 |
19436564 |
19434109 |
Primers |
TRINITY_DN13620_c0_g2_i11 |
Mononucleotide |
(T)10 |
10 |
1569 |
1578 |
2 |
19436564 |
19434109 |
Primers |
TRINITY_DN11886_c0_g1_i5 |
Mononucleotide |
(A)14 |
14 |
4592 |
4605 |
6 |
338733 |
334436 |
Primers |
TRINITY_DN13459_c0_g4_i4 |
Mononucleotide |
(A)14 |
14 |
718 |
731 |
3 |
28184606 |
28183075 |
Primers |
TRINITY_DN10261_c0_g1_i1 |
Mononucleotide |
(T)10 |
10 |
3 |
12 |
2 |
20634598 |
20638153 |
Primers |
TRINITY_DN10261_c0_g1_i1 |
Dinucleotide |
(CT)6 |
12 |
4264 |
4275 |
2 |
20634598 |
20638153 |
Primers |
TRINITY_DN10261_c0_g1_i1 |
Dinucleotide |
(AC)10 |
20 |
4862 |
4881 |
2 |
20634598 |
20638153 |
Primers |
TRINITY_DN14402_c0_g1_i8 |
Dinucleotide |
(TA)7 |
14 |
905 |
918 |
2 |
12211718 |
12210500 |
Primers |
TRINITY_DN14402_c0_g1_i8 |
Trinucleotide |
(GAC)5 |
15 |
3377 |
3391 |
2 |
12211718 |
12210500 |
Primers |
TRINITY_DN13277_c0_g3_i3 |
Trinucleotide |
(GAA)7 |
21 |
3639 |
3659 |
6 |
4169207 |
4166121 |
Primers |
TRINITY_DN13277_c0_g3_i3 |
Trinucleotide |
(TAA)8 |
24 |
4733 |
4756 |
6 |
4169207 |
4166121 |
Primers |
TRINITY_DN11735_c2_g1_i3 |
Mononucleotide |
(T)10 |
10 |
240 |
249 |
3 |
1429740 |
1432069 |
Primers |
TRINITY_DN11735_c2_g1_i3 |
Mononucleotide |
(T)12 |
12 |
4166 |
4177 |
3 |
1429740 |
1432069 |
Primers |
TRINITY_DN11735_c2_g1_i3 |
Mononucleotide |
(A)14 |
14 |
4346 |
4359 |
3 |
1429740 |
1432069 |
Primers |
TRINITY_DN11735_c2_g1_i3 |
Mononucleotide |
(A)11 |
11 |
5176 |
5186 |
3 |
1429740 |
1432069 |
Primers |
TRINITY_DN11173_c1_g3_i4 |
Dinucleotide |
(TG)6 |
12 |
3265 |
3276 |
6 |
6860606 |
6864185 |
Primers |
TRINITY_DN11173_c1_g3_i4 |
Mononucleotide |
(T)17 |
17 |
4964 |
4980 |
6 |
6860606 |
6864185 |
Primers |
TRINITY_DN13081_c0_g3_i3 |
Mononucleotide |
(T)12 |
12 |
2791 |
2802 |
3 |
29607024 |
29605184 |
Primers |
TRINITY_DN13081_c0_g3_i3 |
Mononucleotide |
(T)10 |
10 |
3790 |
3799 |
3 |
29607024 |
29605184 |
Primers |
TRINITY_DN13081_c0_g3_i3 |
Compound |
(TTC)5ta(CTT)6(CTG)7 |
56 |
4975 |
5030 |
3 |
29607024 |
29605184 |
Primers |
TRINITY_DN12303_c3_g2_i3 |
Mononucleotide |
(A)10 |
10 |
294 |
303 |
5 |
26570422 |
26566851 |
Primers |
TRINITY_DN12303_c3_g2_i3 |
Tetranucleotide |
(AAGA)6 |
24 |
2703 |
2726 |
5 |
26570422 |
26566851 |
Primers |
TRINITY_DN12303_c3_g2_i3 |
Mononucleotide |
(A)10 |
10 |
2858 |
2867 |
5 |
26570422 |
26566851 |
Primers |
TRINITY_DN11317_c0_g3_i14 |
Mononucleotide |
(T)23 |
23 |
21 |
43 |
6 |
27883575 |
27882164 |
Primers |
TRINITY_DN11317_c0_g3_i14 |
Mononucleotide |
(A)10 |
10 |
602 |
611 |
6 |
27883575 |
27882164 |
Primers |
TRINITY_DN11317_c0_g3_i14 |
Mononucleotide |
(A)15 |
15 |
5219 |
5233 |
6 |
27883575 |
27882164 |
Primers |
TRINITY_DN11653_c1_g1_i23 |
Dinucleotide |
(TA)12 |
24 |
58 |
81 |
5 |
16426389 |
16423730 |
Primers |
TRINITY_DN11653_c1_g1_i23 |
Mononucleotide |
(T)10 |
10 |
4560 |
4569 |
5 |
16426389 |
16423730 |
Primers |
TRINITY_DN12658_c1_g2_i5 |
Dinucleotide |
(AG)7 |
14 |
5236 |
5249 |
1 |
3654672 |
3656490 |
Primers |
TRINITY_DN14743_c16_g2_i4 |
Mononucleotide |
(A)13 |
13 |
394 |
406 |
5 |
19667482 |
19664524 |
Primers |
TRINITY_DN13848_c3_g1_i7 |
Trinucleotide |
(TTC)7 |
21 |
416 |
436 |
1 |
4823239 |
4825310 |
Primers |
TRINITY_DN13848_c3_g1_i7 |
Mononucleotide |
(A)11 |
11 |
4620 |
4630 |
1 |
4823239 |
4825310 |
Primers |
TRINITY_DN11940_c0_g1_i1 |
Dinucleotide |
(AT)6 |
12 |
2374 |
2385 |
7 |
11049861 |
11045683 |
Primers |
TRINITY_DN12326_c0_g2_i7 |
Trinucleotide |
(AAG)8 |
24 |
4967 |
4990 |
5 |
21362962 |
21365756 |
Primers |
TRINITY_DN8938_c0_g1_i1 |
Mononucleotide |
(T)19 |
19 |
305 |
323 |
2 |
16066405 |
16061144 |
Primers |
TRINITY_DN8938_c0_g1_i1 |
Mononucleotide |
(T)10 |
10 |
5088 |
5097 |
2 |
16066405 |
16061144 |
Primers |
TRINITY_DN13243_c1_g1_i3 |
Mononucleotide |
(A)14 |
14 |
3448 |
3461 |
2 |
6371575 |
6366992 |
Primers |
TRINITY_DN13243_c1_g1_i3 |
Mononucleotide |
(T)10 |
10 |
4025 |
4034 |
2 |
6371575 |
6366992 |
Primers |
TRINITY_DN12915_c0_g4_i1 |
Mononucleotide |
(A)10 |
10 |
2107 |
2116 |
5 |
7188606 |
7185477 |
Primers |
TRINITY_DN12915_c0_g4_i1 |
Trinucleotide |
(CTG)5 |
15 |
3427 |
3441 |
5 |
7188606 |
7185477 |
Primers |
TRINITY_DN12915_c0_g4_i1 |
Mononucleotide |
(A)10 |
10 |
4672 |
4681 |
5 |
7188606 |
7185477 |
Primers |
TRINITY_DN12915_c0_g4_i1 |
Mononucleotide |
(A)10 |
10 |
5039 |
5048 |
5 |
7188606 |
7185477 |
Primers |
TRINITY_DN12915_c0_g4_i1 |
Dinucleotide |
(GA)9 |
18 |
5216 |
5233 |
5 |
7188606 |
7185477 |
Primers |
TRINITY_DN13972_c0_g1_i17 |
Mononucleotide |
(T)11 |
11 |
185 |
195 |
4 |
12836365 |
12835429 |
Primers |
TRINITY_DN13842_c1_g1_i25 |
Mononucleotide |
(A)10 |
10 |
329 |
338 |
1 |
2145428 |
2147223 |
Primers |
TRINITY_DN12695_c0_g1_i31 |
Mononucleotide |
(A)10 |
10 |
152 |
161 |
3 |
25121652 |
25125175 |
Primers |
TRINITY_DN13721_c1_g3_i1 |
Mononucleotide |
(T)11 |
11 |
1145 |
1155 |
5 |
3621596 |
3616346 |
Primers |
TRINITY_DN13721_c1_g3_i1 |
Trinucleotide |
(CAT)5 |
15 |
2549 |
2563 |
5 |
3621596 |
3616346 |
Primers |
TRINITY_DN13721_c1_g3_i1 |
Trinucleotide |
(TGC)5 |
15 |
3364 |
3378 |
5 |
3621596 |
3616346 |
Primers |
TRINITY_DN13721_c1_g3_i1 |
Mononucleotide |
(T)20 |
20 |
4394 |
4413 |
5 |
3621596 |
3616346 |
Primers |
TRINITY_DN12916_c1_g1_i7 |
Mononucleotide |
(A)10 |
10 |
1452 |
1461 |
2 |
13067009 |
13064414 |
Primers |
TRINITY_DN12916_c1_g1_i7 |
Trinucleotide |
(TTC)7 |
21 |
4657 |
4677 |
2 |
13067009 |
13064414 |
Primers |
TRINITY_DN12916_c1_g1_i7 |
Compound |
(AG)10aagcataggcaaggaagaaggtaggggctcgagaa(AG)10aagcataggcaaggaagaaggtaggggctcgagaa(AG)9 |
128 |
5119 |
5246 |
2 |
13067009 |
13064414 |
Primers |
TRINITY_DN13233_c3_g1_i12 |
Trinucleotide |
(TGT)6 |
18 |
123 |
140 |
6 |
24789767 |
24784525 |
Primers |
TRINITY_DN13233_c3_g1_i12 |
Mononucleotide |
(A)11 |
11 |
4419 |
4429 |
6 |
24789767 |
24784525 |
Primers |
TRINITY_DN13561_c1_g2_i6 |
Mononucleotide |
(T)15 |
15 |
429 |
443 |
3 |
36900367 |
36897771 |
Primers |
TRINITY_DN13561_c1_g2_i6 |
Mononucleotide |
(T)12 |
12 |
5208 |
5219 |
3 |
36900367 |
36897771 |
Primers |
TRINITY_DN12058_c1_g3_i16 |
Mononucleotide |
(A)16 |
16 |
19 |
34 |
2 |
16017298 |
16019073 |
Primers |
TRINITY_DN12058_c1_g3_i16 |
Mononucleotide |
(T)22 |
22 |
669 |
690 |
2 |
16017298 |
16019073 |
Primers |
TRINITY_DN12183_c0_g1_i2 |
Dinucleotide |
(AT)6 |
12 |
47 |
58 |
6 |
21271700 |
21274902 |
Primers |
TRINITY_DN12183_c0_g1_i2 |
Mononucleotide |
(T)13 |
13 |
380 |
392 |
6 |
21271700 |
21274902 |
Primers |
TRINITY_DN12183_c0_g1_i2 |
Dinucleotide |
(AT)8 |
16 |
2234 |
2249 |
6 |
21271700 |
21274902 |
Primers |
TRINITY_DN12001_c3_g7_i3 |
Dinucleotide |
(AG)9 |
18 |
147 |
164 |
6 |
26379585 |
26375809 |
Primers |
TRINITY_DN12001_c3_g7_i3 |
Pentanucleotide |
(TCTCT)5 |
25 |
416 |
440 |
6 |
26379585 |
26375809 |
Primers |
TRINITY_DN12001_c3_g7_i3 |
Dinucleotide |
(TC)9 |
18 |
2912 |
2929 |
6 |
26379585 |
26375809 |
Primers |
TRINITY_DN14369_c0_g1_i9 |
Trinucleotide |
(GAA)10 |
30 |
4877 |
4906 |
5 |
18482827 |
18487345 |
Primers |
TRINITY_DN13629_c0_g2_i2 |
Dinucleotide |
(AG)13 |
26 |
1270 |
1295 |
5 |
3497709 |
3494992 |
Primers |
TRINITY_DN13629_c0_g2_i2 |
Mononucleotide |
(A)17 |
17 |
1827 |
1843 |
5 |
3497709 |
3494992 |
Primers |
TRINITY_DN14452_c1_g1_i14 |
Dinucleotide |
(TA)8 |
16 |
4673 |
4688 |
1 |
6755915 |
6755076 |
Primers |
TRINITY_DN14452_c1_g1_i14 |
Mononucleotide |
(A)14 |
14 |
4920 |
4933 |
1 |
6755915 |
6755076 |
Primers |
TRINITY_DN12200_c0_g1_i10 |
Mononucleotide |
(A)15 |
15 |
713 |
727 |
6 |
24903438 |
24900436 |
Primers |
TRINITY_DN14477_c0_g1_i32 |
Mononucleotide |
(A)15 |
15 |
1598 |
1612 |
7 |
15307252 |
15308913 |
Primers |
TRINITY_DN14477_c0_g1_i32 |
Mononucleotide |
(T)10 |
10 |
1886 |
1895 |
7 |
15307252 |
15308913 |
Primers |
TRINITY_DN14477_c0_g1_i32 |
Mononucleotide |
(A)10 |
10 |
4534 |
4543 |
7 |
15307252 |
15308913 |
Primers |
TRINITY_DN13930_c1_g1_i18 |
Compound |
(AG)12at(A)13 |
39 |
4882 |
4920 |
5 |
23582067 |
23580759 |
Primers |
TRINITY_DN13522_c0_g1_i13 |
Mononucleotide |
(T)11 |
11 |
4865 |
4875 |
6 |
17531375 |
17529324 |
Primers |
TRINITY_DN12529_c1_g2_i1 |
Trinucleotide |
(AAG)5 |
15 |
5145 |
5159 |
3 |
508933 |
503709 |
Primers |
TRINITY_DN13683_c2_g3_i1 |
Mononucleotide |
(T)10 |
10 |
1716 |
1725 |
5 |
9091675 |
9087432 |
Primers |
TRINITY_DN12271_c0_g2_i13 |
Compound |
(T)18(AT)8 |
34 |
186 |
219 |
7 |
5104457 |
5099438 |
Primers |
TRINITY_DN12271_c0_g2_i13 |
Mononucleotide |
(T)12 |
12 |
4904 |
4915 |
7 |
5104457 |
5099438 |
Primers |
TRINITY_DN13374_c4_g1_i10 |
Mononucleotide |
(A)11 |
11 |
4699 |
4709 |
6 |
5209832 |
5207613 |
Primers |
TRINITY_DN14234_c2_g4_i1 |
Mononucleotide |
(A)12 |
12 |
4322 |
4333 |
3 |
15154992 |
15149996 |
Primers |
TRINITY_DN14234_c2_g4_i1 |
Mononucleotide |
(T)11 |
11 |
4904 |
4914 |
3 |
15154992 |
15149996 |
Primers |
TRINITY_DN11859_c3_g2_i3 |
Mononucleotide |
(T)17 |
17 |
14 |
30 |
1 |
12060651 |
12057348 |
Primers |
TRINITY_DN11859_c3_g2_i3 |
Mononucleotide |
(T)17 |
17 |
163 |
179 |
1 |
12060651 |
12057348 |
Primers |
TRINITY_DN11859_c3_g2_i3 |
Dinucleotide |
(CT)6 |
12 |
330 |
341 |
1 |
12060651 |
12057348 |
Primers |
TRINITY_DN11859_c3_g2_i3 |
Dinucleotide |
(AC)9 |
18 |
1526 |
1543 |
1 |
12060651 |
12057348 |
Primers |
TRINITY_DN11859_c3_g2_i3 |
Mononucleotide |
(T)10 |
10 |
3133 |
3142 |
1 |
12060651 |
12057348 |
Primers |
TRINITY_DN11859_c3_g2_i3 |
Mononucleotide |
(T)18 |
18 |
3280 |
3297 |
1 |
12060651 |
12057348 |
Primers |
TRINITY_DN11859_c3_g2_i3 |
Dinucleotide |
(TG)16 |
32 |
5132 |
5163 |
1 |
12060651 |
12057348 |
Primers |
TRINITY_DN12288_c1_g3_i5 |
Mononucleotide |
(T)18 |
18 |
680 |
697 |
6 |
5268584 |
5272551 |
Primers |
TRINITY_DN13025_c0_g1_i10 |
Mononucleotide |
(A)10 |
10 |
1903 |
1912 |
1 |
2729896 |
2731517 |
Primers |
TRINITY_DN13025_c0_g1_i10 |
Mononucleotide |
(T)13 |
13 |
3988 |
4000 |
1 |
2729896 |
2731517 |
Primers |
TRINITY_DN10981_c3_g2_i8 |
Trinucleotide |
(CTT)6 |
18 |
226 |
243 |
6 |
18376134 |
18373267 |
Primers |
TRINITY_DN10981_c3_g2_i8 |
Mononucleotide |
(T)10 |
10 |
4819 |
4828 |
6 |
18376134 |
18373267 |
Primers |
TRINITY_DN14029_c3_g1_i12 |
Mononucleotide |
(A)10 |
10 |
26 |
35 |
3 |
11384472 |
11382232 |
Primers |
TRINITY_DN14029_c3_g1_i12 |
Trinucleotide |
(GAA)5 |
15 |
1579 |
1593 |
3 |
11384472 |
11382232 |
Primers |
TRINITY_DN12594_c0_g1_i28 |
Dinucleotide |
(TG)7 |
14 |
4727 |
4740 |
3 |
36119347 |
36118442 |
Primers |
TRINITY_DN14498_c2_g1_i10 |
Dinucleotide |
(GA)12 |
24 |
5136 |
5159 |
3 |
37440358 |
37438597 |
Primers |
TRINITY_DN14062_c0_g1_i7 |
Mononucleotide |
(A)13 |
13 |
52 |
64 |
1 |
25561757 |
25564345 |
Primers |
TRINITY_DN14062_c0_g1_i7 |
Trinucleotide |
(ATA)5 |
15 |
1973 |
1987 |
1 |
25561757 |
25564345 |
Primers |
TRINITY_DN14062_c0_g1_i7 |
Mononucleotide |
(A)10 |
10 |
3623 |
3632 |
1 |
25561757 |
25564345 |
Primers |
TRINITY_DN14062_c0_g1_i7 |
Mononucleotide |
(A)10 |
10 |
4324 |
4333 |
1 |
25561757 |
25564345 |
Primers |
TRINITY_DN11832_c0_g1_i6 |
Mononucleotide |
(A)10 |
10 |
3475 |
3484 |
1 |
28265621 |
28268170 |
Primers |
TRINITY_DN11832_c0_g1_i6 |
Compound |
(C)12acagtttccttcactcaactgggttttctccaagctcaacacagctcagtcaaaat(A)17 |
85 |
4484 |
4568 |
1 |
28265621 |
28268170 |
Primers |
TRINITY_DN11832_c0_g1_i6 |
Mononucleotide |
(A)19 |
19 |
4693 |
4711 |
1 |
28265621 |
28268170 |
Primers |
TRINITY_DN11832_c0_g1_i6 |
Dinucleotide |
(AG)6 |
12 |
5068 |
5079 |
1 |
28265621 |
28268170 |
Primers |
TRINITY_DN11363_c0_g1_i11 |
Mononucleotide |
(T)10 |
10 |
1620 |
1629 |
7 |
2513725 |
2510038 |
Primers |
TRINITY_DN11363_c0_g1_i11 |
Mononucleotide |
(T)10 |
10 |
3338 |
3347 |
7 |
2513725 |
2510038 |
Primers |
TRINITY_DN11731_c1_g1_i4 |
Trinucleotide |
(GCT)5 |
15 |
1969 |
1983 |
1 |
5303332 |
5307402 |
Primers |
TRINITY_DN11731_c1_g1_i4 |
Mononucleotide |
(T)16 |
16 |
4056 |
4071 |
1 |
5303332 |
5307402 |
Primers |
TRINITY_DN11731_c1_g1_i4 |
Dinucleotide |
(AG)9 |
18 |
5170 |
5187 |
1 |
5303332 |
5307402 |
Primers |
TRINITY_DN13985_c6_g1_i1 |
Mononucleotide |
(A)14 |
14 |
1559 |
1572 |
2 |
18452511 |
18448996 |
Primers |
TRINITY_DN13985_c6_g1_i1 |
Mononucleotide |
(A)14 |
14 |
4904 |
4917 |
2 |
18452511 |
18448996 |
Primers |
TRINITY_DN13985_c6_g1_i1 |
Mononucleotide |
(T)13 |
13 |
5158 |
5170 |
2 |
18452511 |
18448996 |
Primers |
TRINITY_DN14199_c0_g1_i14 |
Mononucleotide |
(A)10 |
10 |
888 |
897 |
2 |
19584540 |
19582881 |
Primers |
TRINITY_DN10348_c0_g1_i12 |
Mononucleotide |
(A)21 |
21 |
213 |
233 |
6 |
20216141 |
20218796 |
Primers |
TRINITY_DN11406_c0_g3_i3 |
Trinucleotide |
(CTT)7 |
21 |
134 |
154 |
1 |
13024090 |
13021101 |
Primers |
TRINITY_DN13381_c0_g1_i10 |
Dinucleotide |
(TA)7 |
14 |
2264 |
2277 |
1 |
20340151 |
20341456 |
Primers |
TRINITY_DN12956_c1_g1_i27 |
Dinucleotide |
(CT)7 |
14 |
2195 |
2208 |
4 |
1585303 |
1588589 |
Primers |
TRINITY_DN11637_c0_g1_i16 |
Compound |
(CTT)8tgattcgattctattcgatttaatgtttttgttttttttaattccttgttttttgttttctgcttctttcgaggtactc(T)14 |
117 |
156 |
272 |
6 |
16616469 |
16613104 |
Primers |
TRINITY_DN11637_c0_g1_i16 |
Tetranucleotide |
(TATT)5 |
20 |
514 |
533 |
6 |
16616469 |
16613104 |
Primers |
TRINITY_DN12205_c0_g1_i8 |
Mononucleotide |
(A)10 |
10 |
4741 |
4750 |
7 |
18308660 |
18311289 |
Primers |
TRINITY_DN12966_c0_g1_i11 |
Dinucleotide |
(TC)6 |
12 |
211 |
222 |
3 |
28895602 |
28898157 |
Primers |
TRINITY_DN12966_c0_g1_i11 |
Dinucleotide |
(TC)7 |
14 |
3789 |
3802 |
3 |
28895602 |
28898157 |
Primers |
TRINITY_DN12944_c0_g1_i8 |
Compound |
(A)10cagtagcacatttcatgacaaaatggacagagaaagctattcaagcaattgcaaaaggaaaaggagaaggaga(AG)8aaac(A)12 |
115 |
2454 |
2568 |
3 |
11005152 |
11003484 |
Primers |
TRINITY_DN12944_c0_g1_i8 |
Mononucleotide |
(A)10 |
10 |
5150 |
5159 |
3 |
11005152 |
11003484 |
Primers |
TRINITY_DN12278_c0_g9_i2 |
Compound |
(AT)6(GT)12 |
36 |
3085 |
3120 |
4 |
19142916 |
19139814 |
Primers |
TRINITY_DN13678_c5_g2_i17 |
Trinucleotide |
(CTT)6 |
18 |
278 |
295 |
6 |
21706539 |
21707871 |
Primers |
TRINITY_DN13678_c5_g2_i17 |
Mononucleotide |
(A)15 |
15 |
2132 |
2146 |
6 |
21706539 |
21707871 |
Primers |
TRINITY_DN13803_c1_g2_i22 |
Mononucleotide |
(A)11 |
11 |
2843 |
2853 |
2 |
9582420 |
9583411 |
Primers |
TRINITY_DN13386_c1_g1_i14 |
Mononucleotide |
(T)16 |
16 |
924 |
939 |
7 |
1672120 |
1669039 |
Primers |
TRINITY_DN13386_c1_g1_i14 |
Compound |
(AC)7aaattcagacaatcaagccaacccacttgggaaaaacaaaacatgaagaaccaagaactcagcaataacaaatttgatacaaaacagaaac(A)32 |
137 |
4612 |
4748 |
7 |
1672120 |
1669039 |
Primers |
TRINITY_DN13386_c1_g1_i14 |
Compound |
(T)10c(T)14 |
25 |
5028 |
5052 |
7 |
1672120 |
1669039 |
Primers |
TRINITY_DN14175_c2_g1_i4 |
Mononucleotide |
(A)10 |
10 |
436 |
445 |
4 |
22497200 |
22494815 |
Primers |
TRINITY_DN14175_c2_g1_i4 |
Mononucleotide |
(A)19 |
19 |
3229 |
3247 |
4 |
22497200 |
22494815 |
Primers |
TRINITY_DN14133_c0_g4_i3 |
Trinucleotide |
(AGA)6 |
18 |
4116 |
4133 |
3 |
27385031 |
27380637 |
Primers |
TRINITY_DN14133_c0_g4_i3 |
Trinucleotide |
(ATT)6 |
18 |
4784 |
4801 |
3 |
27385031 |
27380637 |
Primers |
TRINITY_DN11616_c1_g1_i5 |
Dinucleotide |
(AC)7 |
14 |
1454 |
1467 |
2 |
15622081 |
15618406 |
Primers |
TRINITY_DN11616_c1_g1_i5 |
Dinucleotide |
(TC)7 |
14 |
1813 |
1826 |
2 |
15622081 |
15618406 |
Primers |
TRINITY_DN11616_c1_g1_i5 |
Trinucleotide |
(TTC)5 |
15 |
4068 |
4082 |
2 |
15622081 |
15618406 |
Primers |
TRINITY_DN11095_c0_g1_i22 |
Mononucleotide |
(A)10 |
10 |
1687 |
1696 |
2 |
16046755 |
16048324 |
Primers |
TRINITY_DN13078_c1_g1_i10 |
Compound |
(GTG)6gatatttcatcttcggatatcagagaacagttagatctttctataaatacaatatttcttgtcccacaaa(T)10 |
98 |
1687 |
1784 |
2 |
17957940 |
17954676 |
Primers |
TRINITY_DN11270_c0_g1_i1 |
Compound |
(CT)8atctctctcttaacag(AC)6 |
44 |
96 |
139 |
3 |
34787411 |
34783808 |
Primers |
TRINITY_DN11270_c0_g1_i1 |
Mononucleotide |
(T)18 |
18 |
5046 |
5063 |
3 |
34787411 |
34783808 |
Primers |
TRINITY_DN12408_c2_g2_i16 |
Dinucleotide |
(TC)8 |
16 |
20 |
35 |
3 |
28205285 |
28200323 |
Primers |
TRINITY_DN12408_c2_g2_i16 |
Mononucleotide |
(T)13 |
13 |
2010 |
2022 |
3 |
28205285 |
28200323 |
Primers |
TRINITY_DN13200_c0_g1_i8 |
Mononucleotide |
(A)10 |
10 |
4651 |
4660 |
5 |
6175388 |
6172354 |
Primers |
TRINITY_DN13200_c0_g1_i8 |
Trinucleotide |
(AAG)6 |
18 |
4896 |
4913 |
5 |
6175388 |
6172354 |
Primers |
TRINITY_DN13521_c0_g1_i23 |
Dinucleotide |
(TA)8 |
16 |
63 |
78 |
6 |
2625281 |
2621914 |
Primers |
TRINITY_DN13521_c0_g1_i23 |
Mononucleotide |
(T)10 |
10 |
1834 |
1843 |
6 |
2625281 |
2621914 |
Primers |
TRINITY_DN13521_c0_g1_i23 |
Dinucleotide |
(CT)6 |
12 |
4948 |
4959 |
6 |
2625281 |
2621914 |
Primers |
TRINITY_DN12605_c0_g1_i13 |
Mononucleotide |
(T)12 |
12 |
287 |
298 |
3 |
21498277 |
21494174 |
Primers |
TRINITY_DN12605_c0_g1_i13 |
Compound |
(TG)7tc(TA)6 |
28 |
2093 |
2120 |
3 |
21498277 |
21494174 |
Primers |
TRINITY_DN12605_c0_g1_i13 |
Trinucleotide |
(ATT)6 |
18 |
5003 |
5020 |
3 |
21498277 |
21494174 |
Primers |
TRINITY_DN14543_c3_g5_i6 |
Mononucleotide |
(T)24 |
24 |
610 |
633 |
6 |
19089194 |
19085473 |
Primers |
TRINITY_DN12334_c0_g1_i29 |
Mononucleotide |
(A)10 |
10 |
3247 |
3256 |
4 |
688414 |
689802 |
Primers |
TRINITY_DN12334_c0_g1_i29 |
Mononucleotide |
(T)10 |
10 |
4513 |
4522 |
4 |
688414 |
689802 |
Primers |
TRINITY_DN12334_c0_g1_i29 |
Compound* |
(A)10(AG)7* |
23 |
4917 |
4939 |
4 |
688414 |
689802 |
Primers |
TRINITY_DN14008_c1_g1_i7 |
Mononucleotide |
(T)10 |
10 |
2430 |
2439 |
6 |
21155632 |
21159014 |
Primers |
TRINITY_DN14008_c1_g1_i7 |
Mononucleotide |
(T)10 |
10 |
3273 |
3282 |
6 |
21155632 |
21159014 |
Primers |
TRINITY_DN13213_c5_g1_i13 |
Mononucleotide |
(A)11 |
11 |
2253 |
2263 |
7 |
18385588 |
18386864 |
Primers |
TRINITY_DN12830_c0_g8_i1 |
Mononucleotide |
(A)10 |
10 |
4550 |
4559 |
2 |
5322333 |
5326756 |
Primers |
TRINITY_DN12830_c0_g8_i1 |
Mononucleotide |
(A)10 |
10 |
5107 |
5116 |
2 |
5322333 |
5326756 |
Primers |
TRINITY_DN10076_c0_g1_i1 |
Mononucleotide |
(T)10 |
10 |
157 |
166 |
3 |
28948633 |
28944561 |
Primers |
TRINITY_DN13787_c2_g7_i14 |
Compound |
(A)10ttaaaccaagaaaag(A)12gtagaaaaaagagttcactacctaatctgtcagctcgtcaactgcagattcttccc(CTT)6 |
111 |
4578 |
4688 |
6 |
16446936 |
16449863 |
Primers |
TRINITY_DN13787_c2_g7_i14 |
Trinucleotide |
(TTG)5 |
15 |
4973 |
4987 |
6 |
16446936 |
16449863 |
Primers |
TRINITY_DN13787_c2_g7_i14 |
Trinucleotide |
(CTC)7 |
21 |
5118 |
5138 |
6 |
16446936 |
16449863 |
Primers |
TRINITY_DN13254_c1_g1_i3 |
Mononucleotide |
(T)12 |
12 |
205 |
216 |
2 |
3169320 |
3168015 |
Primers |
TRINITY_DN14635_c2_g1_i7 |
Mononucleotide |
(T)16 |
16 |
16 |
31 |
3 |
23145589 |
23141795 |
Primers |
TRINITY_DN14635_c2_g1_i7 |
Mononucleotide |
(A)23 |
23 |
1307 |
1329 |
3 |
23145589 |
23141795 |
Primers |
TRINITY_DN11722_c0_g2_i19 |
Mononucleotide |
(T)11 |
11 |
1521 |
1531 |
1 |
20924168 |
20919014 |
Primers |
TRINITY_DN11722_c0_g2_i19 |
Mononucleotide |
(T)13 |
13 |
3661 |
3673 |
1 |
20924168 |
20919014 |
Primers |
TRINITY_DN13539_c0_g1_i6 |
Hexanucleotide |
(GCAACA)12 |
72 |
847 |
918 |
7 |
5677385 |
5673551 |
Primers |
TRINITY_DN12518_c2_g4_i1 |
Trinucleotide |
(CAG)5 |
15 |
2951 |
2965 |
7 |
1525736 |
1524166 |
Primers |
TRINITY_DN13126_c0_g1_i1 |
Mononucleotide |
(A)11 |
11 |
2682 |
2692 |
2 |
12057386 |
12062532 |
Primers |
TRINITY_DN12496_c1_g1_i12 |
Mononucleotide |
(T)11 |
11 |
1241 |
1251 |
2 |
15718394 |
15721549 |
Primers |
TRINITY_DN12496_c1_g1_i12 |
Compound |
(GT)10at(AG)7 |
36 |
4905 |
4940 |
2 |
15718394 |
15721549 |
Primers |
TRINITY_DN12077_c0_g1_i28 |
Mononucleotide |
(A)11 |
11 |
2954 |
2964 |
2 |
19744325 |
19742928 |
Primers |
TRINITY_DN12077_c0_g1_i28 |
Compound |
(AAG)9gttcatattatccctagtttaattgttttcacggatttcatgaagatatggagaa(AG)7 |
96 |
4568 |
4663 |
2 |
19744325 |
19742928 |
Primers |
TRINITY_DN12077_c0_g1_i28 |
Trinucleotide |
(GAA)8 |
24 |
4858 |
4881 |
2 |
19744325 |
19742928 |
Primers |
TRINITY_DN12077_c0_g1_i28 |
Mononucleotide |
(A)10 |
10 |
5047 |
5056 |
2 |
19744325 |
19742928 |
Primers |
TRINITY_DN10765_c0_g1_i2 |
Mononucleotide |
(T)10 |
10 |
352 |
361 |
6 |
23929410 |
23927957 |
Primers |
TRINITY_DN12704_c0_g7_i10 |
Mononucleotide |
(T)10 |
10 |
673 |
682 |
3 |
36912655 |
36915824 |
Primers |
TRINITY_DN12704_c0_g7_i10 |
Mononucleotide |
(A)10 |
10 |
1745 |
1754 |
3 |
36912655 |
36915824 |
Primers |
TRINITY_DN13623_c0_g3_i12 |
Mononucleotide |
(A)12 |
12 |
3388 |
3399 |
7 |
9614254 |
9615599 |
Primers |
TRINITY_DN14547_c1_g1_i14 |
Hexanucleotide |
(TTTTTC)5 |
30 |
48 |
77 |
4 |
22091143 |
22093138 |
Primers |
TRINITY_DN14653_c0_g1_i13 |
Compound |
(TC)6tttttcttg(T)12 |
33 |
58 |
90 |
6 |
6176874 |
6180160 |
Primers |
TRINITY_DN12805_c0_g4_i4 |
Dinucleotide |
(TC)6 |
12 |
1266 |
1277 |
3 |
11130841 |
11133164 |
Primers |
TRINITY_DN12805_c0_g4_i4 |
Trinucleotide |
(AAG)5 |
15 |
3629 |
3643 |
3 |
11130841 |
11133164 |
Primers |
TRINITY_DN12805_c0_g4_i4 |
Dinucleotide |
(AT)7 |
14 |
4300 |
4313 |
3 |
11130841 |
11133164 |
Primers |
TRINITY_DN12628_c1_g1_i16 |
Mononucleotide |
(A)16 |
16 |
4233 |
4248 |
4 |
20167557 |
20170637 |
Primers |
TRINITY_DN12298_c2_g3_i2 |
Dinucleotide |
(AG)6 |
12 |
390 |
401 |
5 |
9704394 |
9706752 |
Primers |
TRINITY_DN12298_c2_g3_i2 |
Mononucleotide |
(A)11 |
11 |
4352 |
4362 |
5 |
9704394 |
9706752 |
Primers |
TRINITY_DN12298_c2_g3_i2 |
Compound |
(A)11ctactaaaataaccgatcagcagcgaagaaccacaaacaaacaacataaaaaaaattcagaaatcaaacaaacagaaa(AG)6 |
101 |
4784 |
4884 |
5 |
9704394 |
9706752 |
Primers |
TRINITY_DN12298_c2_g3_i2 |
Trinucleotide |
(GAA)11 |
33 |
5082 |
5114 |
5 |
9704394 |
9706752 |
Primers |
TRINITY_DN11317_c0_g4_i8 |
Trinucleotide |
(TTC)7 |
21 |
76 |
96 |
1 |
22278888 |
22280836 |
Primers |
TRINITY_DN13066_c5_g3_i13 |
Trinucleotide |
(TCT)6 |
18 |
212 |
229 |
1 |
20444954 |
20446316 |
Primers |
TRINITY_DN13066_c5_g3_i13 |
Trinucleotide |
(TGC)6 |
18 |
482 |
499 |
1 |
20444954 |
20446316 |
Primers |
TRINITY_DN11872_c0_g1_i5 |
Mononucleotide |
(A)10 |
10 |
1931 |
1940 |
3 |
36884778 |
36888272 |
Primers |
TRINITY_DN11872_c0_g1_i5 |
Mononucleotide |
(T)10 |
10 |
4279 |
4288 |
3 |
36884778 |
36888272 |
Primers |
TRINITY_DN12858_c1_g4_i6 |
Mononucleotide |
(A)12 |
12 |
1114 |
1125 |
6 |
27965515 |
27970646 |
Primers |
TRINITY_DN11518_c0_g1_i5 |
Dinucleotide |
(TG)6 |
12 |
2622 |
2633 |
6 |
19510497 |
19508688 |
Primers |
TRINITY_DN14411_c1_g2_i4 |
Mononucleotide |
(T)12 |
12 |
4850 |
4861 |
1 |
9292307 |
9293071 |
Primers |
TRINITY_DN14536_c6_g2_i11 |
Mononucleotide |
(T)10 |
10 |
2013 |
2022 |
3 |
33390203 |
33391805 |
Primers |
TRINITY_DN14536_c6_g2_i11 |
Trinucleotide |
(AGA)5 |
15 |
4977 |
4991 |
3 |
33390203 |
33391805 |
Primers |
TRINITY_DN11648_c2_g1_i13 |
Compound |
(A)17ggaattctctactttctctcacccacacagagaaaaattcaacaggcccacattgaatttagagc(T)10 |
92 |
5015 |
5106 |
3 |
31897500 |
31900631 |
Primers |
TRINITY_DN12941_c1_g2_i6 |
Mononucleotide |
(T)17 |
17 |
3270 |
3286 |
2 |
2632461 |
2631164 |
Primers |
TRINITY_DN12941_c1_g2_i6 |
Dinucleotide |
(TG)10 |
20 |
3834 |
3853 |
2 |
2632461 |
2631164 |
Primers |
TRINITY_DN11605_c2_g1_i12 |
Mononucleotide |
(A)11 |
11 |
3814 |
3824 |
1 |
1868124 |
1870895 |
Primers |
TRINITY_DN11605_c2_g1_i12 |
Mononucleotide |
(A)12 |
12 |
4922 |
4933 |
1 |
1868124 |
1870895 |
Primers |
TRINITY_DN12749_c0_g1_i16 |
Mononucleotide |
(A)10 |
10 |
91 |
100 |
6 |
8202300 |
8205145 |
Primers |
TRINITY_DN12749_c0_g1_i16 |
Dinucleotide |
(TC)6 |
12 |
1224 |
1235 |
6 |
8202300 |
8205145 |
Primers |
TRINITY_DN14161_c1_g3_i1 |
Trinucleotide |
(TCT)9 |
27 |
25 |
51 |
6 |
26220455 |
26217269 |
Primers |
TRINITY_DN14161_c1_g3_i1 |
Trinucleotide |
(AGT)5 |
15 |
1617 |
1631 |
6 |
26220455 |
26217269 |
Primers |
TRINITY_DN14161_c1_g3_i1 |
Mononucleotide |
(T)12 |
12 |
2361 |
2372 |
6 |
26220455 |
26217269 |
Primers |
TRINITY_DN14161_c1_g3_i1 |
Mononucleotide |
(A)10 |
10 |
2522 |
2531 |
6 |
26220455 |
26217269 |
Primers |
TRINITY_DN14161_c1_g3_i1 |
Mononucleotide |
(A)12 |
12 |
2945 |
2956 |
6 |
26220455 |
26217269 |
Primers |
TRINITY_DN12354_c2_g2_i3 |
Dinucleotide |
(TC)10 |
20 |
154 |
173 |
6 |
7052405 |
7047291 |
Primers |
TRINITY_DN12354_c2_g2_i3 |
Mononucleotide |
(T)21 |
21 |
3446 |
3466 |
6 |
7052405 |
7047291 |
Primers |
TRINITY_DN12922_c0_g1_i3 |
Mononucleotide |
(A)13 |
13 |
122 |
134 |
6 |
12744127 |
12745268 |
Primers |
TRINITY_DN12103_c0_g5_i1 |
Trinucleotide |
(TTC)6 |
18 |
159 |
176 |
6 |
24249538 |
24245181 |
Primers |
TRINITY_DN12103_c0_g5_i1 |
Mononucleotide |
(T)13 |
13 |
2649 |
2661 |
6 |
24249538 |
24245181 |
Primers |
TRINITY_DN13239_c0_g1_i16 |
Compound |
(AC)6atcaccccaccaccatcatcatcatcaacaacacaaatattttttcaaacttatctacgatccaaacggctattcttctcttc(T)14 |
109 |
237 |
345 |
3 |
38059191 |
38057700 |
Primers |
TRINITY_DN13239_c0_g1_i16 |
Mononucleotide |
(A)10 |
10 |
3329 |
3338 |
3 |
38059191 |
38057700 |
Primers |
TRINITY_DN13239_c0_g1_i16 |
Mononucleotide |
(G)10 |
10 |
5102 |
5111 |
3 |
38059191 |
38057700 |
Primers |
TRINITY_DN12622_c0_g1_i10 |
Mononucleotide |
(A)10 |
10 |
3560 |
3569 |
2 |
3343656 |
3344748 |
Primers |
TRINITY_DN12622_c0_g1_i10 |
Mononucleotide |
(A)12 |
12 |
5006 |
5017 |
2 |
3343656 |
3344748 |
Primers |
TRINITY_DN14651_c1_g1_i9 |
Mononucleotide |
(T)11 |
11 |
1362 |
1372 |
7 |
4645732 |
4650241 |
Primers |
TRINITY_DN11310_c0_g1_i14 |
Dinucleotide |
(AT)6 |
12 |
164 |
175 |
3 |
32077803 |
32079370 |
Primers |
TRINITY_DN12127_c2_g2_i2 |
Compound |
(CT)6ttaatttaaacaacttttattgagaaaaaatg(A)18 |
62 |
2055 |
2116 |
5 |
10501700 |
10503240 |
Primers |
TRINITY_DN13193_c0_g1_i1 |
Mononucleotide |
(A)10 |
10 |
4380 |
4389 |
2 |
8092634 |
8091036 |
Primers |
TRINITY_DN12876_c0_g1_i3 |
Mononucleotide |
(A)10 |
10 |
4518 |
4527 |
1 |
1811781 |
1815085 |
Primers |
TRINITY_DN13652_c1_g1_i25 |
Dinucleotide |
(AG)15 |
30 |
4966 |
4995 |
3 |
35283275 |
35284945 |
Primers |
TRINITY_DN11442_c1_g2_i13 |
Mononucleotide |
(T)17 |
17 |
392 |
408 |
1 |
121395 |
118813 |
Primers |
TRINITY_DN14551_c0_g1_i2 |
Trinucleotide |
(TTG)8 |
24 |
83 |
106 |
2 |
16272263 |
16268649 |
Primers |
TRINITY_DN14551_c0_g1_i2 |
Mononucleotide |
(T)35 |
35 |
2920 |
2954 |
2 |
16272263 |
16268649 |
Primers |
TRINITY_DN12237_c0_g1_i9 |
Mononucleotide |
(T)10 |
10 |
196 |
205 |
6 |
8683608 |
8685806 |
Primers |
TRINITY_DN12237_c0_g1_i9 |
Mononucleotide |
(A)12 |
12 |
4142 |
4153 |
6 |
8683608 |
8685806 |
Primers |
TRINITY_DN12237_c0_g1_i9 |
Dinucleotide |
(TA)6 |
12 |
4631 |
4642 |
6 |
8683608 |
8685806 |
Primers |
TRINITY_DN12237_c0_g1_i9 |
Mononucleotide |
(A)11 |
11 |
4763 |
4773 |
6 |
8683608 |
8685806 |
Primers |
TRINITY_DN13657_c4_g2_i6 |
Mononucleotide |
(A)11 |
11 |
408 |
418 |
1 |
25798823 |
25796182 |
Primers |
TRINITY_DN13657_c4_g2_i6 |
Dinucleotide |
(TG)6 |
12 |
2947 |
2958 |
1 |
25798823 |
25796182 |
Primers |
TRINITY_DN11389_c2_g4_i1 |
Mononucleotide |
(A)10 |
10 |
10 |
19 |
5 |
22326797 |
22324670 |
Primers |
TRINITY_DN14623_c8_g1_i7 |
Mononucleotide |
(A)11 |
11 |
3759 |
3769 |
2 |
5743715 |
5746542 |
Primers |
TRINITY_DN10670_c5_g1_i13 |
Compound |
(T)12aatttttaatttgagaaaaccgggtttgttacgagtttttgttttttgattctaaggctttgatttggtactttctgcttcggttggtggtg(T)27 |
131 |
532 |
662 |
3 |
12754850 |
12750831 |
Primers |
TRINITY_DN12271_c0_g1_i4 |
Compound |
(A)12cccaattaaaaattaaaggaaacatttgtagcagagcaaaaacagaggagtc(AG)17 |
98 |
189 |
286 |
1 |
19283282 |
19282027 |
Primers |
TRINITY_DN14009_c2_g4_i8 |
Compound |
(TTTC)6c(T)26 |
51 |
4779 |
4829 |
6 |
17658422 |
17656966 |
Primers |
TRINITY_DN11986_c0_g1_i9 |
Mononucleotide |
(A)11 |
11 |
697 |
707 |
7 |
18403817 |
18406305 |
Primers |
TRINITY_DN11986_c0_g1_i9 |
Mononucleotide |
(A)10 |
10 |
3560 |
3569 |
7 |
18403817 |
18406305 |
Primers |
TRINITY_DN11986_c0_g1_i9 |
Trinucleotide |
(TTG)5 |
15 |
4912 |
4926 |
7 |
18403817 |
18406305 |
Primers |
TRINITY_DN12829_c0_g1_i13 |
Mononucleotide |
(T)10 |
10 |
509 |
518 |
3 |
37942307 |
37945599 |
Primers |
TRINITY_DN12829_c0_g1_i13 |
Compound |
(A)13gcacaaaaaaaccaactcccgatcagatcatgaagttggggtttggaaaaaataggatgagatttgaatggaatctctctagaagaagaaatgaac(T)11 |
120 |
4744 |
4863 |
3 |
37942307 |
37945599 |
Primers |
TRINITY_DN14624_c1_g2_i1 |
Trinucleotide |
(TCT)12 |
36 |
135 |
170 |
3 |
25312384 |
25307427 |
Primers |
TRINITY_DN14624_c1_g2_i1 |
Mononucleotide |
(T)11 |
11 |
2499 |
2509 |
3 |
25312384 |
25307427 |
Primers |
TRINITY_DN14624_c1_g2_i1 |
Mononucleotide |
(A)16 |
16 |
5065 |
5080 |
3 |
25312384 |
25307427 |
Primers |
TRINITY_DN13705_c2_g2_i6 |
Dinucleotide |
(CT)6 |
12 |
379 |
390 |
5 |
7053783 |
7055610 |
Primers |
TRINITY_DN12607_c3_g1_i4 |
Dinucleotide |
(AT)6 |
12 |
2869 |
2880 |
1 |
15495032 |
15491633 |
Primers |
TRINITY_DN12607_c3_g1_i4 |
Mononucleotide |
(A)12 |
12 |
3119 |
3130 |
1 |
15495032 |
15491633 |
Primers |
TRINITY_DN12607_c3_g1_i4 |
Mononucleotide |
(A)23 |
23 |
4820 |
4842 |
1 |
15495032 |
15491633 |
Primers |
TRINITY_DN12607_c3_g1_i4 |
Trinucleotide |
(AGA)5 |
15 |
5011 |
5025 |
1 |
15495032 |
15491633 |
Primers |
TRINITY_DN9130_c0_g1_i4 |
Dinucleotide |
(TC)8 |
16 |
738 |
753 |
4 |
3650695 |
3655772 |
Primers |
TRINITY_DN9130_c0_g1_i4 |
Mononucleotide |
(T)10 |
10 |
2168 |
2177 |
4 |
3650695 |
3655772 |
Primers |
TRINITY_DN14261_c3_g1_i1 |
Mononucleotide |
(A)29 |
29 |
17 |
45 |
5 |
15078459 |
15073431 |
Primers |
TRINITY_DN14261_c3_g1_i1 |
Mononucleotide |
(T)14 |
14 |
3902 |
3915 |
5 |
15078459 |
15073431 |
Primers |
TRINITY_DN12871_c1_g4_i2 |
Mononucleotide |
(A)11 |
11 |
3726 |
3736 |
6 |
1705621 |
1702377 |
Primers |
TRINITY_DN11087_c6_g4_i7 |
Mononucleotide |
(A)15 |
15 |
1936 |
1950 |
3 |
14020181 |
14015846 |
Primers |
TRINITY_DN13582_c0_g1_i14 |
Mononucleotide |
(G)10 |
10 |
19 |
28 |
6 |
15987140 |
15988941 |
Primers |
TRINITY_DN14210_c0_g1_i31 |
Mononucleotide |
(A)16 |
16 |
957 |
972 |
1 |
22001894 |
21999663 |
Primers |
TRINITY_DN14698_c4_g1_i2 |
Mononucleotide |
(T)10 |
10 |
2383 |
2392 |
4 |
10063490 |
10062574 |
Primers |
TRINITY_DN13387_c0_g1_i6 |
Mononucleotide |
(T)11 |
11 |
1305 |
1315 |
3 |
39254099 |
39258699 |
Primers |
TRINITY_DN13387_c0_g1_i6 |
Mononucleotide |
(A)13 |
13 |
4592 |
4604 |
3 |
39254099 |
39258699 |
Primers |
TRINITY_DN14112_c0_g1_i12 |
Hexanucleotide |
(CTTCTC)7 |
42 |
5015 |
5056 |
1 |
5909552 |
5911234 |
Primers |
TRINITY_DN13277_c0_g1_i3 |
Mononucleotide |
(A)11 |
11 |
1019 |
1029 |
7 |
1829665 |
1827856 |
Primers |
TRINITY_DN13277_c0_g1_i3 |
Dinucleotide |
(TG)8 |
16 |
1326 |
1341 |
7 |
1829665 |
1827856 |
Primers |
TRINITY_DN13277_c0_g1_i3 |
Trinucleotide |
(GAA)7 |
21 |
4893 |
4913 |
7 |
1829665 |
1827856 |
Primers |
TRINITY_DN13889_c0_g2_i6 |
Mononucleotide |
(T)16 |
16 |
376 |
391 |
3 |
12872950 |
12869752 |
Primers |
TRINITY_DN12659_c4_g3_i3 |
Mononucleotide |
(T)13 |
13 |
1793 |
1805 |
4 |
19174483 |
19177326 |
Primers |
TRINITY_DN11640_c0_g1_i11 |
Mononucleotide |
(A)11 |
11 |
3275 |
3285 |
7 |
2790081 |
2791527 |
Primers |
TRINITY_DN10708_c0_g1_i1 |
Compound |
(T)13gtaggatttgtgatttgtaaagaaga(T)10 |
49 |
4825 |
4873 |
5 |
10350592 |
10353037 |
Primers |
TRINITY_DN13920_c1_g3_i1 |
Mononucleotide |
(A)11 |
11 |
3496 |
3506 |
4 |
6374383 |
6379430 |
Primers |
TRINITY_DN13774_c3_g1_i9 |
Mononucleotide |
(T)12 |
12 |
46 |
57 |
3 |
35569772 |
35567859 |
Primers |
TRINITY_DN13774_c3_g1_i9 |
Mononucleotide |
(A)10 |
10 |
547 |
556 |
3 |
35569772 |
35567859 |
Primers |
TRINITY_DN13774_c3_g1_i9 |
Tetranucleotide |
(AAGA)5 |
20 |
4675 |
4694 |
3 |
35569772 |
35567859 |
Primers |
TRINITY_DN14219_c1_g2_i10 |
Mononucleotide |
(A)12 |
12 |
1026 |
1037 |
6 |
5707143 |
5708780 |
Primers |
TRINITY_DN14219_c1_g2_i10 |
Mononucleotide |
(A)13 |
13 |
4409 |
4421 |
6 |
5707143 |
5708780 |
Primers |
TRINITY_DN12609_c1_g3_i5 |
Trinucleotide |
(GCA)6 |
18 |
3607 |
3624 |
7 |
18382278 |
18380233 |
Primers |
TRINITY_DN12609_c1_g3_i5 |
Trinucleotide |
(CAG)6 |
18 |
4541 |
4558 |
7 |
18382278 |
18380233 |
Primers |
TRINITY_DN13464_c0_g2_i2 |
Mononucleotide |
(A)12 |
12 |
4075 |
4086 |
3 |
6950542 |
6955579 |
Primers |
TRINITY_DN13464_c0_g2_i2 |
Dinucleotide |
(TC)6 |
12 |
4248 |
4259 |
3 |
6950542 |
6955579 |
Primers |
TRINITY_DN13149_c0_g1_i8 |
Mononucleotide |
(A)10 |
10 |
4192 |
4201 |
7 |
18141574 |
18144128 |
Primers |
TRINITY_DN13149_c0_g1_i8 |
Trinucleotide |
(TTA)6 |
18 |
4493 |
4510 |
7 |
18141574 |
18144128 |
Primers |
TRINITY_DN12147_c1_g2_i11 |
Mononucleotide |
(T)10 |
10 |
750 |
759 |
6 |
15248111 |
15251520 |
Primers |
TRINITY_DN12147_c1_g2_i11 |
Compound |
(A)11gaacatttaagtttcacaattctaaactctaaaaaaattaatgtggtgtttctttcatcatctttgtacaacttttgacaagtggtcagg(A)10ctcatttacaaccaaatgaaaaggcaagtgggttacacttgaacatccctaatcaaacaccactaa(T)22 |
199 |
1095 |
1293 |
6 |
15248111 |
15251520 |
Primers |
TRINITY_DN12147_c1_g2_i11 |
Mononucleotide |
(A)24 |
24 |
1434 |
1457 |
6 |
15248111 |
15251520 |
Primers |
TRINITY_DN13668_c0_g3_i4 |
Mononucleotide |
(A)13 |
13 |
1657 |
1669 |
2 |
18602757 |
18606605 |
Primers |
TRINITY_DN12399_c3_g1_i10 |
Dinucleotide |
(GA)9 |
18 |
552 |
569 |
4 |
21913425 |
21911206 |
Primers |
TRINITY_DN9756_c0_g1_i10 |
Mononucleotide |
(T)15 |
15 |
4609 |
4623 |
6 |
9258238 |
9253198 |
Primers |
TRINITY_DN11296_c6_g1_i3 |
Mononucleotide |
(A)19 |
19 |
2278 |
2296 |
3 |
38625096 |
38626963 |
Primers |
TRINITY_DN10863_c0_g1_i1 |
Mononucleotide |
(A)13 |
13 |
4175 |
4187 |
5 |
6904659 |
6899626 |
Primers |
TRINITY_DN10863_c0_g1_i1 |
Trinucleotide |
(CTT)5 |
15 |
4689 |
4703 |
5 |
6904659 |
6899626 |
Primers |
TRINITY_DN10863_c0_g1_i1 |
Dinucleotide |
(GA)11 |
22 |
5008 |
5029 |
5 |
6904659 |
6899626 |
Primers |
TRINITY_DN9146_c0_g1_i2 |
Mononucleotide |
(T)12 |
12 |
3038 |
3049 |
6 |
3816775 |
3811741 |
Primers |
TRINITY_DN9146_c0_g1_i2 |
Mononucleotide |
(A)10 |
10 |
4775 |
4784 |
6 |
3816775 |
3811741 |
Primers |
TRINITY_DN14625_c7_g3_i4 |
Mononucleotide |
(T)11 |
11 |
4001 |
4011 |
1 |
1190325 |
1185977 |
Primers |
TRINITY_DN11902_c0_g2_i8 |
Mononucleotide |
(A)10 |
10 |
1217 |
1226 |
4 |
19247007 |
19245872 |
Primers |
TRINITY_DN14352_c4_g2_i2 |
Mononucleotide |
(A)21 |
21 |
53 |
73 |
4 |
7544451 |
7549476 |
Primers |
TRINITY_DN12850_c0_g3_i22 |
Trinucleotide |
(CTT)6 |
18 |
6 |
23 |
6 |
752487 |
754953 |
Primers |
TRINITY_DN12850_c0_g3_i22 |
Mononucleotide |
(T)11 |
11 |
511 |
521 |
6 |
752487 |
754953 |
Primers |
TRINITY_DN14003_c1_g3_i13 |
Compound |
(A)10cggaaaaaga(G)23 |
43 |
4984 |
5026 |
6 |
2275274 |
2274470 |
Primers |
TRINITY_DN10752_c0_g1_i11 |
Trinucleotide |
(TTC)5 |
15 |
74 |
88 |
6 |
16527840 |
16530711 |
Primers |
TRINITY_DN10752_c0_g1_i11 |
Mononucleotide |
(T)12 |
12 |
316 |
327 |
6 |
16527840 |
16530711 |
Primers |
TRINITY_DN10752_c0_g1_i11 |
Mononucleotide |
(T)10 |
10 |
513 |
522 |
6 |
16527840 |
16530711 |
Primers |
TRINITY_DN10752_c0_g1_i11 |
Dinucleotide |
(TA)10 |
20 |
2215 |
2234 |
6 |
16527840 |
16530711 |
Primers |
TRINITY_DN13802_c1_g1_i5 |
Mononucleotide |
(A)15 |
15 |
828 |
842 |
3 |
272104 |
270137 |
Primers |
TRINITY_DN13802_c1_g1_i5 |
Mononucleotide |
(A)12 |
12 |
3357 |
3368 |
3 |
272104 |
270137 |
Primers |
TRINITY_DN13802_c1_g1_i5 |
Compound |
(T)13(G)10 |
23 |
3524 |
3546 |
3 |
272104 |
270137 |
Primers |
TRINITY_DN13802_c1_g1_i5 |
Mononucleotide |
(T)11 |
11 |
3789 |
3799 |
3 |
272104 |
270137 |
Primers |
TRINITY_DN13802_c1_g1_i5 |
Mononucleotide |
(A)10 |
10 |
4168 |
4177 |
3 |
272104 |
270137 |
Primers |
TRINITY_DN13046_c0_g3_i4 |
Dinucleotide |
(TA)9 |
18 |
416 |
433 |
2 |
18711382 |
18714243 |
Primers |
TRINITY_DN13046_c0_g3_i4 |
Mononucleotide |
(A)11 |
11 |
549 |
559 |
2 |
18711382 |
18714243 |
Primers |
TRINITY_DN13046_c0_g3_i4 |
Trinucleotide |
(AGC)5 |
15 |
720 |
734 |
2 |
18711382 |
18714243 |
Primers |
TRINITY_DN13046_c0_g3_i4 |
Mononucleotide |
(A)15 |
15 |
2111 |
2125 |
2 |
18711382 |
18714243 |
Primers |
TRINITY_DN10379_c0_g1_i10 |
Mononucleotide |
(A)10 |
10 |
4681 |
4690 |
6 |
20313617 |
20309373 |
Primers |
TRINITY_DN12633_c1_g1_i10 |
Mononucleotide |
(A)12 |
12 |
2058 |
2069 |
5 |
16827733 |
16829682 |
Primers |
TRINITY_DN12633_c1_g1_i10 |
Mononucleotide |
(T)12 |
12 |
2194 |
2205 |
5 |
16827733 |
16829682 |
Primers |
TRINITY_DN14042_c2_g1_i9 |
Dinucleotide |
(TA)11 |
22 |
46 |
67 |
4 |
7006726 |
7003836 |
Primers |
TRINITY_DN14042_c2_g1_i9 |
Dinucleotide |
(AG)8 |
16 |
1121 |
1136 |
4 |
7006726 |
7003836 |
Primers |
TRINITY_DN14042_c2_g1_i9 |
Mononucleotide |
(T)16 |
16 |
4984 |
4999 |
4 |
7006726 |
7003836 |
Primers |
TRINITY_DN12520_c0_g1_i21 |
Mononucleotide |
(T)31 |
31 |
1 |
31 |
3 |
3647362 |
3652027 |
Primers |
TRINITY_DN12520_c0_g1_i21 |
Dinucleotide |
(TC)6 |
12 |
623 |
634 |
3 |
3647362 |
3652027 |
Primers |
TRINITY_DN12520_c0_g1_i21 |
Trinucleotide |
(ATA)5 |
15 |
956 |
970 |
3 |
3647362 |
3652027 |
Primers |
TRINITY_DN12520_c0_g1_i21 |
Mononucleotide |
(A)10 |
10 |
2960 |
2969 |
3 |
3647362 |
3652027 |
Primers |
TRINITY_DN12520_c0_g1_i21 |
Mononucleotide |
(A)10 |
10 |
3688 |
3697 |
3 |
3647362 |
3652027 |
Primers |
TRINITY_DN12520_c0_g1_i21 |
Mononucleotide |
(A)10 |
10 |
4180 |
4189 |
3 |
3647362 |
3652027 |
Primers |
TRINITY_DN12059_c1_g1_i4 |
Mononucleotide |
(A)10 |
10 |
4634 |
4643 |
4 |
18514217 |
18517034 |
Primers |
TRINITY_DN12059_c1_g1_i4 |
Trinucleotide |
(GAG)5 |
15 |
4963 |
4977 |
4 |
18514217 |
18517034 |
Primers |
TRINITY_DN11510_c1_g1_i17 |
Compound |
(TC)7gatctgagaattgatcatatcatgtcaagcgaaggaagaaaagatccgactgaagccgggtcatcgtcgag(GAC)9 |
112 |
97 |
208 |
5 |
27950722 |
27953875 |
Primers |
TRINITY_DN11510_c1_g1_i17 |
Trinucleotide |
(CAA)6 |
18 |
644 |
661 |
5 |
27950722 |
27953875 |
Primers |
TRINITY_DN11510_c1_g1_i17 |
Mononucleotide |
(A)14 |
14 |
943 |
956 |
5 |
27950722 |
27953875 |
Primers |
TRINITY_DN11510_c1_g1_i17 |
Pentanucleotide |
(CCTTC)5 |
25 |
3019 |
3043 |
5 |
27950722 |
27953875 |
Primers |
TRINITY_DN11510_c1_g1_i17 |
Trinucleotide |
(CAG)5 |
15 |
4794 |
4808 |
5 |
27950722 |
27953875 |
Primers |
TRINITY_DN12404_c1_g2_i8 |
Mononucleotide |
(T)13 |
13 |
1213 |
1225 |
6 |
12362783 |
12366840 |
Primers |
TRINITY_DN12404_c1_g2_i8 |
Mononucleotide |
(A)10 |
10 |
1501 |
1510 |
6 |
12362783 |
12366840 |
Primers |
TRINITY_DN12404_c1_g2_i8 |
Dinucleotide |
(TA)6 |
12 |
2757 |
2768 |
6 |
12362783 |
12366840 |
Primers |
TRINITY_DN12404_c1_g2_i8 |
Trinucleotide |
(TTA)7 |
21 |
2948 |
2968 |
6 |
12362783 |
12366840 |
Primers |
TRINITY_DN12404_c1_g2_i8 |
Dinucleotide |
(CT)6 |
12 |
4385 |
4396 |
6 |
12362783 |
12366840 |
Primers |
TRINITY_DN12792_c1_g1_i2 |
Trinucleotide |
(AAG)6 |
18 |
51 |
68 |
4 |
20026935 |
20023306 |
Primers |
TRINITY_DN12792_c1_g1_i2 |
Mononucleotide |
(T)11 |
11 |
3440 |
3450 |
4 |
20026935 |
20023306 |
Primers |
TRINITY_DN12649_c4_g1_i1 |
Trinucleotide |
(ATA)5 |
15 |
366 |
380 |
6 |
28424146 |
28428092 |
Primers |
TRINITY_DN13930_c1_g2_i7 |
Compound |
(A)11ggaaaggtggagtccag(A)14 |
42 |
3 |
44 |
5 |
21923857 |
21921316 |
Primers |
TRINITY_DN13930_c1_g2_i7 |
Mononucleotide |
(A)12 |
12 |
1082 |
1093 |
5 |
21923857 |
21921316 |
Primers |
TRINITY_DN13930_c1_g2_i7 |
Mononucleotide |
(A)12 |
12 |
1434 |
1445 |
5 |
21923857 |
21921316 |
Primers |
TRINITY_DN13930_c1_g2_i7 |
Dinucleotide |
(AT)8 |
16 |
2273 |
2288 |
5 |
21923857 |
21921316 |
Primers |
TRINITY_DN11536_c0_g1_i1 |
Trinucleotide |
(TAT)5 |
15 |
910 |
924 |
3 |
31194692 |
31197455 |
Primers |
TRINITY_DN11536_c0_g1_i1 |
Mononucleotide |
(A)10 |
10 |
4294 |
4303 |
3 |
31194692 |
31197455 |
Primers |
TRINITY_DN11910_c1_g5_i7 |
Trinucleotide |
(CTT)12 |
36 |
1 |
36 |
2 |
14707101 |
14704528 |
Primers |
TRINITY_DN11910_c1_g5_i7 |
Mononucleotide |
(T)11 |
11 |
800 |
810 |
2 |
14707101 |
14704528 |
Primers |
TRINITY_DN11910_c1_g5_i7 |
Trinucleotide |
(TGA)5 |
15 |
4261 |
4275 |
2 |
14707101 |
14704528 |
Primers |
TRINITY_DN11910_c1_g5_i7 |
Dinucleotide |
(TA)8 |
16 |
4577 |
4592 |
2 |
14707101 |
14704528 |
Primers |
TRINITY_DN12070_c0_g1_i8 |
Mononucleotide |
(A)12 |
12 |
1903 |
1914 |
7 |
3275363 |
3277986 |
Primers |
TRINITY_DN12070_c0_g1_i8 |
Mononucleotide |
(A)12 |
12 |
4362 |
4373 |
7 |
3275363 |
3277986 |
Primers |
TRINITY_DN13244_c1_g5_i3 |
Trinucleotide |
(TCA)6 |
18 |
3831 |
3848 |
5 |
10969053 |
10967288 |
Primers |
TRINITY_DN14270_c1_g2_i4 |
Mononucleotide |
(A)30 |
30 |
339 |
368 |
3 |
27785137 |
27786789 |
Primers |
TRINITY_DN14270_c1_g2_i4 |
Dinucleotide |
(TC)8 |
16 |
3024 |
3039 |
3 |
27785137 |
27786789 |
Primers |
TRINITY_DN14352_c4_g1_i9 |
Mononucleotide |
(A)10 |
10 |
21 |
30 |
4 |
1345268 |
1348115 |
Primers |
TRINITY_DN14352_c4_g1_i9 |
Trinucleotide |
(TTC)7 |
21 |
280 |
300 |
4 |
1345268 |
1348115 |
Primers |
TRINITY_DN14352_c4_g1_i9 |
Trinucleotide |
(GTT)8 |
24 |
566 |
589 |
4 |
1345268 |
1348115 |
Primers |
TRINITY_DN14428_c1_g1_i1 |
Dinucleotide |
(TC)6 |
12 |
2908 |
2919 |
6 |
11259751 |
11257707 |
Primers |
TRINITY_DN12575_c0_g1_i3 |
Dinucleotide |
(TA)8 |
16 |
4955 |
4970 |
3 |
21297389 |
21300057 |
Primers |
TRINITY_DN11659_c2_g1_i1 |
Trinucleotide |
(TTA)5 |
15 |
3491 |
3505 |
3 |
5974509 |
5977592 |
Primers |
TRINITY_DN12280_c4_g2_i14 |
Mononucleotide |
(A)25 |
25 |
29 |
53 |
2 |
2967190 |
2968825 |
Primers |
TRINITY_DN12280_c4_g2_i14 |
Mononucleotide |
(T)14 |
14 |
2217 |
2230 |
2 |
2967190 |
2968825 |
Primers |
TRINITY_DN14371_c1_g1_i28 |
Compound* |
(CTT)5(T)19* |
32 |
1906 |
1937 |
1 |
5149969 |
5154854 |
Primers |
TRINITY_DN14371_c1_g1_i28 |
Mononucleotide |
(A)10 |
10 |
4051 |
4060 |
1 |
5149969 |
5154854 |
Primers |
TRINITY_DN13672_c4_g1_i15 |
Mononucleotide |
(T)12 |
12 |
4314 |
4325 |
6 |
19176074 |
19177893 |
Primers |
TRINITY_DN14305_c1_g2_i3 |
Trinucleotide |
(TCA)8 |
24 |
4048 |
4071 |
3 |
14789033 |
14784430 |
Primers |
TRINITY_DN14305_c1_g2_i3 |
Mononucleotide |
(A)10 |
10 |
4692 |
4701 |
3 |
14789033 |
14784430 |
Primers |
TRINITY_DN13077_c0_g1_i35 |
Trinucleotide |
(TAT)5 |
15 |
366 |
380 |
1 |
1662819 |
1661372 |
Primers |
TRINITY_DN13151_c1_g3_i6 |
Mononucleotide |
(A)10 |
10 |
4355 |
4364 |
3 |
30904391 |
30906821 |
Primers |
TRINITY_DN12079_c1_g4_i8 |
Dinucleotide |
(AG)6 |
12 |
1365 |
1376 |
1 |
14259198 |
14254269 |
Primers |
TRINITY_DN14673_c2_g2_i10 |
Mononucleotide |
(A)10 |
10 |
1995 |
2004 |
1 |
10447188 |
10448346 |
Primers |
TRINITY_DN14673_c2_g2_i10 |
Mononucleotide |
(T)11 |
11 |
2719 |
2729 |
1 |
10447188 |
10448346 |
Primers |
TRINITY_DN11626_c0_g1_i7 |
Mononucleotide |
(T)17 |
17 |
3335 |
3351 |
3 |
11684582 |
11682509 |
Primers |
TRINITY_DN12395_c2_g1_i12 |
Mononucleotide |
(A)11 |
11 |
81 |
91 |
1 |
4354861 |
4351305 |
Primers |
TRINITY_DN12395_c2_g1_i12 |
Trinucleotide |
(CTT)9 |
27 |
1005 |
1031 |
1 |
4354861 |
4351305 |
Primers |
TRINITY_DN13453_c1_g1_i9 |
Mononucleotide |
(T)10 |
10 |
2768 |
2777 |
3 |
8893455 |
8895090 |
Primers |
TRINITY_DN14119_c0_g1_i22 |
Compound |
(T)12(AT)6 |
24 |
575 |
598 |
6 |
7904273 |
7902854 |
Primers |
TRINITY_DN14119_c0_g1_i22 |
Mononucleotide |
(T)17 |
17 |
4045 |
4061 |
6 |
7904273 |
7902854 |
Primers |
TRINITY_DN14119_c0_g1_i22 |
Mononucleotide |
(A)10 |
10 |
4213 |
4222 |
6 |
7904273 |
7902854 |
Primers |
TRINITY_DN10918_c3_g1_i4 |
Mononucleotide |
(T)11 |
11 |
3674 |
3684 |
3 |
25673175 |
25670830 |
Primers |
TRINITY_DN13878_c3_g1_i13 |
Compound |
(A)15gattttaaaaagaaaaaagagaaccgtgatctacaatctttattcaaataaaataaagtaaat(A)10 |
88 |
1518 |
1605 |
4 |
17645178 |
17642640 |
Primers |
TRINITY_DN13906_c2_g6_i9 |
Mononucleotide |
(T)12 |
12 |
495 |
506 |
7 |
18535896 |
18540449 |
Primers |
TRINITY_DN13906_c2_g6_i9 |
Mononucleotide |
(A)19 |
19 |
3834 |
3852 |
7 |
18535896 |
18540449 |
Primers |
TRINITY_DN11989_c0_g1_i4 |
Mononucleotide |
(A)11 |
11 |
658 |
668 |
6 |
5082251 |
5086316 |
Primers |
TRINITY_DN11989_c0_g1_i4 |
Dinucleotide |
(AC)7 |
14 |
2610 |
2623 |
6 |
5082251 |
5086316 |
Primers |
TRINITY_DN13549_c0_g1_i21 |
Mononucleotide |
(A)17 |
17 |
491 |
507 |
1 |
29117392 |
29118298 |
Primers |
TRINITY_DN13549_c0_g1_i21 |
Trinucleotide |
(AGC)5 |
15 |
1384 |
1398 |
1 |
29117392 |
29118298 |
Primers |
TRINITY_DN12163_c0_g2_i14 |
Mononucleotide |
(A)10 |
10 |
2113 |
2122 |
1 |
2329055 |
2326407 |
Primers |
TRINITY_DN13962_c1_g3_i5 |
Mononucleotide |
(A)10 |
10 |
4915 |
4924 |
1 |
27982840 |
27987802 |
Primers |
TRINITY_DN12964_c6_g2_i15 |
Mononucleotide |
(A)14 |
14 |
108 |
121 |
6 |
12688514 |
12687209 |
Primers |
TRINITY_DN10949_c0_g1_i3 |
Mononucleotide |
(T)10 |
10 |
3405 |
3414 |
6 |
24708108 |
24704868 |
Primers |
TRINITY_DN11422_c0_g1_i1 |
Trinucleotide |
(GAA)7 |
21 |
171 |
191 |
4 |
7100030 |
7095070 |
Primers |
TRINITY_DN9045_c0_g1_i6 |
Mononucleotide |
(T)10 |
10 |
447 |
456 |
1 |
15408079 |
15411128 |
Primers |
TRINITY_DN9045_c0_g1_i6 |
Mononucleotide |
(A)11 |
11 |
3822 |
3832 |
1 |
15408079 |
15411128 |
Primers |
TRINITY_DN11106_c1_g2_i5 |
Mononucleotide |
(A)10 |
10 |
574 |
583 |
2 |
152516 |
154545 |
Primers |
TRINITY_DN11106_c1_g2_i5 |
Mononucleotide |
(T)10 |
10 |
3541 |
3550 |
2 |
152516 |
154545 |
Primers |
TRINITY_DN7765_c0_g1_i3 |
Trinucleotide |
(CTT)6 |
18 |
89 |
106 |
2 |
1173778 |
1178615 |
Primers |
TRINITY_DN13181_c4_g5_i7 |
Dinucleotide |
(TC)6 |
12 |
435 |
446 |
5 |
24251689 |
24248465 |
Primers |
TRINITY_DN12398_c0_g1_i15 |
Compound |
(A)10tggcaaggacgcattcgtcaaaatatatgtcatttttaataaaaaataaataaactcaaagttaataaactaatacatttatataattgat(A)11 |
112 |
4178 |
4289 |
5 |
2796324 |
2793374 |
Primers |
TRINITY_DN14424_c1_g3_i3 |
Mononucleotide |
(T)18 |
18 |
661 |
678 |
3 |
7571814 |
7568497 |
Primers |
TRINITY_DN14424_c1_g3_i3 |
Mononucleotide |
(T)11 |
11 |
1074 |
1084 |
3 |
7571814 |
7568497 |
Primers |
TRINITY_DN11342_c0_g1_i16 |
Trinucleotide |
(TTA)5 |
15 |
2457 |
2471 |
5 |
20655864 |
20658593 |
Primers |
TRINITY_DN11342_c0_g1_i16 |
Mononucleotide |
(T)11 |
11 |
3355 |
3365 |
5 |
20655864 |
20658593 |
Primers |
TRINITY_DN11342_c0_g1_i16 |
Mononucleotide |
(A)23 |
23 |
4884 |
4906 |
5 |
20655864 |
20658593 |
Primers |
TRINITY_DN13033_c0_g2_i4 |
Mononucleotide |
(T)12 |
12 |
4736 |
4747 |
2 |
20849661 |
20848242 |
Primers |
TRINITY_DN13090_c1_g1_i20 |
Trinucleotide |
(CCT)8 |
24 |
67 |
90 |
3 |
7613292 |
7615455 |
Primers |
TRINITY_DN13090_c1_g1_i20 |
Mononucleotide |
(A)10 |
10 |
2017 |
2026 |
3 |
7613292 |
7615455 |
Primers |
TRINITY_DN12187_c1_g3_i11 |
Mononucleotide |
(A)18 |
18 |
2432 |
2449 |
5 |
15701823 |
15703989 |
Primers |
TRINITY_DN12187_c1_g3_i11 |
Mononucleotide |
(A)14 |
14 |
4904 |
4917 |
5 |
15701823 |
15703989 |
Primers |
TRINITY_DN10546_c0_g1_i3 |
Trinucleotide |
(GCT)5 |
15 |
3869 |
3883 |
4 |
351847 |
349044 |
Primers |
TRINITY_DN13413_c1_g1_i1 |
Trinucleotide |
(TCT)12 |
36 |
63 |
98 |
3 |
35228582 |
35223641 |
Primers |
TRINITY_DN12510_c2_g1_i7 |
Mononucleotide |
(T)29 |
29 |
4676 |
4704 |
6 |
28150076 |
28148360 |
Primers |
TRINITY_DN11730_c0_g1_i13 |
Mononucleotide |
(T)12 |
12 |
4927 |
4938 |
5 |
27166544 |
27162552 |
Primers |
TRINITY_DN13962_c1_g2_i7 |
Mononucleotide |
(A)12 |
12 |
4384 |
4395 |
3 |
6186719 |
6184804 |
Primers |
TRINITY_DN13962_c1_g2_i7 |
Mononucleotide |
(A)10 |
10 |
4870 |
4879 |
3 |
6186719 |
6184804 |
Primers |
TRINITY_DN13977_c0_g1_i2 |
Dinucleotide |
(AT)6 |
12 |
2524 |
2535 |
3 |
21662059 |
21657679 |
Primers |
TRINITY_DN14577_c1_g3_i3 |
Dinucleotide |
(GA)7 |
14 |
2 |
15 |
6 |
20431186 |
20426241 |
Primers |
TRINITY_DN14577_c1_g3_i3 |
Dinucleotide |
(AT)6 |
12 |
587 |
598 |
6 |
20431186 |
20426241 |
Primers |
TRINITY_DN14577_c1_g3_i3 |
Dinucleotide |
(AT)7 |
14 |
2081 |
2094 |
6 |
20431186 |
20426241 |
Primers |
TRINITY_DN14577_c1_g3_i3 |
Mononucleotide |
(A)10 |
10 |
4560 |
4569 |
6 |
20431186 |
20426241 |
Primers |
TRINITY_DN12919_c2_g1_i21 |
Mononucleotide |
(A)10 |
10 |
2662 |
2671 |
5 |
23204520 |
23206266 |
Primers |
TRINITY_DN11182_c3_g1_i13 |
Pentanucleotide |
(AAAAC)5 |
25 |
3864 |
3888 |
6 |
11425311 |
11428717 |
Primers |
TRINITY_DN11182_c3_g1_i13 |
Dinucleotide |
(TC)18 |
36 |
4302 |
4337 |
6 |
11425311 |
11428717 |
Primers |
TRINITY_DN12180_c1_g1_i6 |
Mononucleotide |
(T)10 |
10 |
374 |
383 |
4 |
12799905 |
12802354 |
Primers |
TRINITY_DN12180_c1_g1_i6 |
Compound |
(AT)6(AG)8g(GA)6 |
41 |
2387 |
2427 |
4 |
12799905 |
12802354 |
Primers |
TRINITY_DN12180_c1_g1_i6 |
Mononucleotide |
(A)16 |
16 |
4820 |
4835 |
4 |
12799905 |
12802354 |
Primers |
TRINITY_DN11372_c0_g1_i8 |
Compound* |
(A)12(AAAG)6* |
33 |
4885 |
4917 |
3 |
12720982 |
12722738 |
Primers |
TRINITY_DN14477_c0_g3_i9 |
Mononucleotide |
(A)10 |
10 |
2263 |
2272 |
6 |
13925572 |
13927692 |
Primers |
TRINITY_DN11629_c3_g2_i6 |
Mononucleotide |
(T)12 |
12 |
934 |
945 |
6 |
6841222 |
6843575 |
Primers |
TRINITY_DN11629_c3_g2_i6 |
Dinucleotide |
(TC)14 |
28 |
4914 |
4941 |
6 |
6841222 |
6843575 |
Primers |
TRINITY_DN11821_c2_g1_i14 |
Compound |
(A)10cccacccaagctgctaacgttgttaccatgtaactaaaacagtattattaattgtcaccagttcag(A)14 |
90 |
1606 |
1695 |
2 |
11893102 |
11891001 |
Primers |
TRINITY_DN11821_c2_g1_i14 |
Mononucleotide |
(A)12 |
12 |
2927 |
2938 |
2 |
11893102 |
11891001 |
Primers |
TRINITY_DN11821_c2_g1_i14 |
Mononucleotide |
(T)19 |
19 |
3110 |
3128 |
2 |
11893102 |
11891001 |
Primers |
TRINITY_DN12202_c0_g2_i3 |
Compound |
(A)12ccccccgtagatttcatcttcatatattaata(T)12 |
56 |
271 |
326 |
2 |
3761400 |
3763424 |
Primers |
TRINITY_DN12458_c0_g1_i31 |
Mononucleotide |
(A)10 |
10 |
275 |
284 |
4 |
20962048 |
20960976 |
Primers |
TRINITY_DN13362_c0_g3_i6 |
Mononucleotide |
(T)11 |
11 |
1393 |
1403 |
6 |
21357201 |
21359814 |
Primers |
TRINITY_DN13362_c0_g3_i6 |
Compound |
(T)13caattttctttattttcaaacaacaacacttgacttttgtttaaattaattaattcattactgtatatataaaataaacttga(T)17 |
113 |
1583 |
1695 |
6 |
21357201 |
21359814 |
Primers |
TRINITY_DN13984_c7_g1_i6 |
Mononucleotide |
(A)16 |
16 |
1645 |
1660 |
6 |
711784 |
709923 |
Primers |
TRINITY_DN13984_c7_g1_i6 |
Mononucleotide |
(T)10 |
10 |
2819 |
2828 |
6 |
711784 |
709923 |
Primers |
TRINITY_DN8589_c0_g1_i6 |
Compound |
(T)10gttttttcaaa(T)10 |
31 |
1334 |
1364 |
6 |
7836876 |
7831940 |
Primers |
TRINITY_DN8589_c0_g1_i6 |
Mononucleotide |
(A)12 |
12 |
4531 |
4542 |
6 |
7836876 |
7831940 |
Primers |
TRINITY_DN13780_c1_g2_i8 |
Mononucleotide |
(T)10 |
10 |
374 |
383 |
5 |
16266760 |
16270797 |
Primers |
TRINITY_DN13780_c1_g2_i8 |
Compound |
(AG)6attttgag(GAA)5 |
35 |
4627 |
4661 |
5 |
16266760 |
16270797 |
Primers |
TRINITY_DN13043_c3_g3_i16 |
Mononucleotide |
(A)10 |
10 |
3428 |
3437 |
5 |
21955364 |
21953556 |
Primers |
TRINITY_DN13043_c3_g3_i16 |
Pentanucleotide |
(TTCCT)5 |
25 |
4853 |
4877 |
5 |
21955364 |
21953556 |
Primers |
TRINITY_DN11755_c1_g1_i7 |
Mononucleotide |
(A)11 |
11 |
1582 |
1592 |
6 |
11522353 |
11527283 |
Primers |
TRINITY_DN11755_c1_g1_i7 |
Mononucleotide |
(A)10 |
10 |
4550 |
4559 |
6 |
11522353 |
11527283 |
Primers |
TRINITY_DN13903_c2_g1_i4 |
Compound |
(TAA)8tagagaaaaaagaaaggcatatttctcaaaagttgatcaaagatgggaccataccctatatattccattgcaaaataacacctactctttttttcttc(T)10 |
132 |
250 |
381 |
3 |
1739720 |
1736946 |
Primers |
TRINITY_DN13903_c2_g1_i4 |
Compound |
(A)10ccaatc(AT)6tcccatttttgtataatttttgtgaataaattagttttttacccag(T)12 |
86 |
680 |
765 |
3 |
1739720 |
1736946 |
Primers |
TRINITY_DN11906_c0_g3_i3 |
Dinucleotide |
(TC)11 |
22 |
189 |
210 |
2 |
1127170 |
1132078 |
Primers |
TRINITY_DN11906_c0_g3_i3 |
Mononucleotide |
(T)12 |
12 |
4871 |
4882 |
2 |
1127170 |
1132078 |
Primers |
TRINITY_DN12216_c0_g1_i7 |
Dinucleotide |
(AG)12 |
24 |
4892 |
4915 |
6 |
10318492 |
10316056 |
Primers |
TRINITY_DN14577_c1_g1_i5 |
Compound |
(TG)6tttctgtttaagc(AT)6gtgtttctgtttaagcatatatattatgtgtctgtttaaac(AT)7ttgtttctgtttaaac(AT)8 |
124 |
2715 |
2838 |
2 |
2207969 |
2203053 |
Primers |
TRINITY_DN13909_c2_g1_i3 |
Mononucleotide |
(A)10 |
10 |
20 |
29 |
3 |
30202777 |
30207448 |
Primers |
TRINITY_DN13909_c2_g1_i3 |
Mononucleotide |
(A)15 |
15 |
241 |
255 |
3 |
30202777 |
30207448 |
Primers |
TRINITY_DN13909_c2_g1_i3 |
Trinucleotide |
(CTT)13 |
39 |
4876 |
4914 |
3 |
30202777 |
30207448 |
Primers |
TRINITY_DN13248_c3_g1_i21 |
Dinucleotide |
(TG)6 |
12 |
1042 |
1053 |
3 |
30771600 |
30770261 |
Primers |
TRINITY_DN12383_c0_g2_i12 |
Mononucleotide |
(A)11 |
11 |
4158 |
4168 |
1 |
3814354 |
3817995 |
Primers |
TRINITY_DN12514_c0_g1_i1 |
Compound |
(T)13c(T)15 |
29 |
611 |
639 |
7 |
12914604 |
12912617 |
Primers |
TRINITY_DN9914_c0_g1_i4 |
Mononucleotide |
(A)11 |
11 |
93 |
103 |
3 |
8487168 |
8490383 |
Primers |
TRINITY_DN9914_c0_g1_i4 |
Mononucleotide |
(A)10 |
10 |
4617 |
4626 |
3 |
8487168 |
8490383 |
Primers |
TRINITY_DN13325_c0_g1_i4 |
Trinucleotide |
(CAT)5 |
15 |
282 |
296 |
2 |
16737988 |
16734180 |
Primers |
TRINITY_DN13325_c0_g1_i4 |
Dinucleotide |
(AT)14 |
28 |
4881 |
4908 |
2 |
16737988 |
16734180 |
Primers |
TRINITY_DN14010_c1_g1_i4 |
Mononucleotide |
(T)19 |
19 |
389 |
407 |
1 |
17590766 |
17588232 |
Primers |
TRINITY_DN12540_c1_g1_i6 |
Mononucleotide |
(T)10 |
10 |
4035 |
4044 |
7 |
11077975 |
11073546 |
Primers |
TRINITY_DN13976_c4_g1_i3 |
Mononucleotide |
(T)10 |
10 |
101 |
110 |
6 |
28507895 |
28503825 |
Primers |
TRINITY_DN13976_c4_g1_i3 |
Dinucleotide |
(TA)8 |
16 |
494 |
509 |
6 |
28507895 |
28503825 |
Primers |
TRINITY_DN13976_c4_g1_i3 |
Dinucleotide |
(AC)10 |
20 |
2055 |
2074 |
6 |
28507895 |
28503825 |
Primers |
TRINITY_DN14022_c3_g2_i2 |
Mononucleotide |
(T)10 |
10 |
35 |
44 |
6 |
8809362 |
8807929 |
Primers |
TRINITY_DN14022_c3_g2_i2 |
Mononucleotide |
(T)10 |
10 |
4619 |
4628 |
6 |
8809362 |
8807929 |
Primers |
TRINITY_DN12662_c3_g8_i2 |
Mononucleotide |
(T)17 |
17 |
907 |
923 |
5 |
23972420 |
23977070 |
Primers |
TRINITY_DN12662_c3_g8_i2 |
Dinucleotide |
(AT)9 |
18 |
4707 |
4724 |
5 |
23972420 |
23977070 |
Primers |
TRINITY_DN10903_c4_g1_i3 |
Dinucleotide |
(AT)13 |
26 |
4877 |
4902 |
1 |
1210111 |
1208491 |
Primers |
TRINITY_DN11605_c2_g3_i5 |
Mononucleotide |
(T)21 |
21 |
628 |
648 |
6 |
28809796 |
28804966 |
Primers |
TRINITY_DN11605_c2_g3_i5 |
Pentanucleotide |
(CAGAG)5 |
25 |
1502 |
1526 |
6 |
28809796 |
28804966 |
Primers |
TRINITY_DN12379_c2_g2_i22 |
Compound* |
(TGT)5(T)21* |
35 |
3812 |
3846 |
7 |
346054 |
343426 |
Primers |
TRINITY_DN12135_c1_g7_i4 |
Mononucleotide |
(A)10 |
10 |
3194 |
3203 |
3 |
32599899 |
32596102 |
Primers |
TRINITY_DN12135_c1_g7_i4 |
Mononucleotide |
(A)10 |
10 |
4278 |
4287 |
3 |
32599899 |
32596102 |
Primers |
TRINITY_DN13543_c2_g1_i7 |
Mononucleotide |
(T)13 |
13 |
407 |
419 |
3 |
7463235 |
7465463 |
Primers |
TRINITY_DN13543_c2_g1_i7 |
Mononucleotide |
(A)19 |
19 |
2795 |
2813 |
3 |
7463235 |
7465463 |
Primers |
TRINITY_DN13543_c2_g1_i7 |
Dinucleotide |
(TA)6 |
12 |
4310 |
4321 |
3 |
7463235 |
7465463 |
Primers |
TRINITY_DN13812_c0_g4_i6 |
Dinucleotide |
(TC)6 |
12 |
281 |
292 |
6 |
19078776 |
19083676 |
Primers |
TRINITY_DN13812_c0_g4_i6 |
Mononucleotide |
(T)10 |
10 |
800 |
809 |
6 |
19078776 |
19083676 |
Primers |
TRINITY_DN13812_c0_g4_i6 |
Mononucleotide |
(T)16 |
16 |
1030 |
1045 |
6 |
19078776 |
19083676 |
Primers |
TRINITY_DN13812_c0_g4_i6 |
Mononucleotide |
(T)10 |
10 |
3261 |
3270 |
6 |
19078776 |
19083676 |
Primers |
TRINITY_DN13812_c0_g4_i6 |
Mononucleotide |
(T)10 |
10 |
4457 |
4466 |
6 |
19078776 |
19083676 |
Primers |
TRINITY_DN13952_c0_g1_i8 |
Mononucleotide |
(G)12 |
12 |
4609 |
4620 |
3 |
11863977 |
11861110 |
Primers |
TRINITY_DN12689_c1_g1_i14 |
Mononucleotide |
(A)10 |
10 |
776 |
785 |
1 |
8616156 |
8614748 |
Primers |
TRINITY_DN12689_c1_g1_i14 |
Mononucleotide |
(T)10 |
10 |
1447 |
1456 |
1 |
8616156 |
8614748 |
Primers |
TRINITY_DN12364_c0_g1_i4 |
Dinucleotide |
(AT)8 |
16 |
923 |
938 |
6 |
25716358 |
25713803 |
Primers |
TRINITY_DN12467_c3_g1_i3 |
Mononucleotide |
(A)10 |
10 |
116 |
125 |
6 |
12674415 |
12676347 |
Primers |
TRINITY_DN12467_c3_g1_i3 |
Dinucleotide |
(TG)7 |
14 |
3154 |
3167 |
6 |
12674415 |
12676347 |
Primers |
TRINITY_DN12467_c3_g1_i3 |
Mononucleotide |
(T)10 |
10 |
4305 |
4314 |
6 |
12674415 |
12676347 |
Primers |
TRINITY_DN12467_c3_g1_i3 |
Compound |
(ATT)6tatttatttgatgacaaagtagtatttttttttattctctttatttttctga(T)10 |
80 |
4543 |
4622 |
6 |
12674415 |
12676347 |
Primers |
TRINITY_DN12098_c0_g1_i3 |
Mononucleotide |
(T)10 |
10 |
4587 |
4596 |
5 |
15247382 |
15244434 |
Primers |
TRINITY_DN11186_c0_g2_i2 |
Trinucleotide |
(CTT)6 |
18 |
58 |
75 |
6 |
10409193 |
10413064 |
Primers |
TRINITY_DN11186_c0_g2_i2 |
Mononucleotide |
(T)13 |
13 |
4871 |
4883 |
6 |
10409193 |
10413064 |
Primers |
TRINITY_DN10806_c0_g1_i6 |
Dinucleotide |
(TA)7 |
14 |
987 |
1000 |
6 |
20531917 |
20536807 |
Primers |
TRINITY_DN10806_c0_g1_i6 |
Mononucleotide |
(A)11 |
11 |
2722 |
2732 |
6 |
20531917 |
20536807 |
Primers |
TRINITY_DN12116_c0_g1_i17 |
Mononucleotide |
(T)10 |
10 |
533 |
542 |
1 |
1389396 |
1392055 |
Primers |
TRINITY_DN12116_c0_g1_i17 |
Mononucleotide |
(A)10 |
10 |
4378 |
4387 |
1 |
1389396 |
1392055 |
Primers |
TRINITY_DN13914_c2_g2_i11 |
Trinucleotide |
(CTT)10 |
30 |
200 |
229 |
6 |
6598552 |
6597359 |
Primers |
TRINITY_DN13914_c2_g2_i11 |
Mononucleotide |
(T)11 |
11 |
4780 |
4790 |
6 |
6598552 |
6597359 |
Primers |
TRINITY_DN12482_c0_g1_i9 |
Mononucleotide |
(A)14 |
14 |
693 |
706 |
3 |
5729840 |
5727222 |
Primers |
TRINITY_DN12482_c0_g1_i9 |
Dinucleotide |
(AG)6 |
12 |
2980 |
2991 |
3 |
5729840 |
5727222 |
Primers |
TRINITY_DN13515_c0_g1_i10 |
Dinucleotide |
(TA)6 |
12 |
3193 |
3204 |
4 |
9819010 |
9820052 |
Primers |
TRINITY_DN13515_c0_g1_i10 |
Mononucleotide |
(T)10 |
10 |
3461 |
3470 |
4 |
9819010 |
9820052 |
Primers |
TRINITY_DN11160_c3_g1_i13 |
Mononucleotide |
(T)10 |
10 |
2010 |
2019 |
3 |
3919672 |
3916613 |
Primers |
TRINITY_DN12274_c2_g1_i4 |
Mononucleotide |
(T)17 |
17 |
72 |
88 |
3 |
37735101 |
37739462 |
Primers |
TRINITY_DN12274_c2_g1_i4 |
Mononucleotide |
(A)14 |
14 |
2896 |
2909 |
3 |
37735101 |
37739462 |
Primers |
TRINITY_DN12274_c2_g1_i4 |
Compound |
(AAG)5atgaagatgaagaggaagaggaggaggagac(TG)6tatgtgtgaagtgggagaaggaggaaatggagattttgtacagatccaatcacgacaaccttgaaagctctcgtgaaaccaaaaatattaaaatt(A)12 |
165 |
4532 |
4696 |
3 |
37735101 |
37739462 |
Primers |
TRINITY_DN12591_c0_g1_i10 |
Tetranucleotide |
(AATA)5 |
20 |
1104 |
1123 |
4 |
4317943 |
4319887 |
Primers |
TRINITY_DN12591_c0_g1_i10 |
Dinucleotide |
(CT)6 |
12 |
1248 |
1259 |
4 |
4317943 |
4319887 |
Primers |
TRINITY_DN12591_c0_g1_i10 |
Trinucleotide |
(ATA)5 |
15 |
2856 |
2870 |
4 |
4317943 |
4319887 |
Primers |
TRINITY_DN12591_c0_g1_i10 |
Compound |
(T)10catag(A)11 |
26 |
4094 |
4119 |
4 |
4317943 |
4319887 |
Primers |
TRINITY_DN11049_c1_g1_i1 |
Mononucleotide |
(T)11 |
11 |
2118 |
2128 |
4 |
9573822 |
9569518 |
Primers |
TRINITY_DN11049_c1_g1_i1 |
Mononucleotide |
(T)10 |
10 |
3886 |
3895 |
4 |
9573822 |
9569518 |
Primers |
TRINITY_DN13199_c2_g3_i3 |
Trinucleotide |
(TGG)5 |
15 |
1401 |
1415 |
1 |
3421976 |
3420192 |
Primers |
TRINITY_DN11584_c2_g4_i1 |
Mononucleotide |
(A)10 |
10 |
210 |
219 |
1 |
4509406 |
4513625 |
Primers |
TRINITY_DN11584_c2_g4_i1 |
Mononucleotide |
(C)11 |
11 |
547 |
557 |
1 |
4509406 |
4513625 |
Primers |
TRINITY_DN14592_c1_g1_i2 |
Mononucleotide |
(A)13 |
13 |
2890 |
2902 |
7 |
6611318 |
6612883 |
Primers |
TRINITY_DN13304_c1_g1_i6 |
Mononucleotide |
(A)10 |
10 |
114 |
123 |
1 |
28347317 |
28345004 |
Primers |
TRINITY_DN13304_c1_g1_i6 |
Dinucleotide |
(CT)6 |
12 |
3927 |
3938 |
1 |
28347317 |
28345004 |
Primers |
TRINITY_DN14276_c2_g1_i8 |
Trinucleotide |
(TAG)7 |
21 |
4593 |
4613 |
2 |
4928672 |
4929720 |
Primers |
TRINITY_DN10797_c0_g1_i5 |
Compound |
(T)11ctttttaattcttcttgttttgtttctgaatctaagtttataaatcttgccttctgctttcaatcagaggatgtattgaatgatatagg(TTTA)5 |
120 |
3583 |
3702 |
5 |
23725020 |
23720149 |
Primers |
TRINITY_DN13302_c0_g2_i20 |
Mononucleotide |
(T)11 |
11 |
1134 |
1144 |
7 |
18226187 |
18224725 |
Primers |
TRINITY_DN13302_c0_g2_i20 |
Mononucleotide |
(A)14 |
14 |
3709 |
3722 |
7 |
18226187 |
18224725 |
Primers |
TRINITY_DN14048_c0_g7_i2 |
Dinucleotide |
(CA)10 |
20 |
120 |
139 |
6 |
19333169 |
19328294 |
Primers |
TRINITY_DN14048_c0_g7_i2 |
Mononucleotide |
(T)10 |
10 |
580 |
589 |
6 |
19333169 |
19328294 |
Primers |
TRINITY_DN13423_c2_g1_i2 |
Dinucleotide |
(AT)9 |
18 |
64 |
81 |
5 |
24279215 |
24283854 |
Primers |
TRINITY_DN13423_c2_g1_i2 |
Dinucleotide |
(GT)9 |
18 |
982 |
999 |
5 |
24279215 |
24283854 |
Primers |
TRINITY_DN13423_c2_g1_i2 |
Mononucleotide |
(A)10 |
10 |
1663 |
1672 |
5 |
24279215 |
24283854 |
Primers |
TRINITY_DN13423_c2_g1_i2 |
Trinucleotide |
(AAG)6 |
18 |
4774 |
4791 |
5 |
24279215 |
24283854 |
Primers |
TRINITY_DN14423_c2_g2_i7 |
Mononucleotide |
(A)10 |
10 |
3341 |
3350 |
3 |
1611016 |
1615894 |
Primers |
TRINITY_DN11912_c1_g3_i2 |
Trinucleotide |
(GAA)5 |
15 |
4611 |
4625 |
4 |
1252257 |
1248743 |
Primers |
TRINITY_DN11751_c0_g3_i2 |
Mononucleotide |
(A)14 |
14 |
1012 |
1025 |
4 |
18175421 |
18172870 |
Primers |
TRINITY_DN12370_c0_g1_i5 |
Mononucleotide |
(A)11 |
11 |
4718 |
4728 |
6 |
344107 |
346478 |
Primers |
TRINITY_DN12218_c3_g2_i17 |
Tetranucleotide |
(TTTA)5 |
20 |
1571 |
1590 |
4 |
2847653 |
2844746 |
Primers |
TRINITY_DN12218_c3_g2_i17 |
Mononucleotide |
(A)11 |
11 |
2207 |
2217 |
4 |
2847653 |
2844746 |
Primers |
TRINITY_DN12123_c1_g2_i2 |
Mononucleotide |
(T)10 |
10 |
78 |
87 |
1 |
24344147 |
24339280 |
Primers |
TRINITY_DN12123_c1_g2_i2 |
Dinucleotide |
(AT)7 |
14 |
491 |
504 |
1 |
24344147 |
24339280 |
Primers |
TRINITY_DN14313_c2_g4_i1 |
Mononucleotide |
(T)10 |
10 |
277 |
286 |
2 |
4840207 |
4844428 |
Primers |
TRINITY_DN14313_c2_g4_i1 |
Trinucleotide |
(TAG)5 |
15 |
627 |
641 |
2 |
4840207 |
4844428 |
Primers |
TRINITY_DN13477_c0_g2_i19 |
Compound |
(GA)6gtgatagagagaagtaataatcgtagtgaatagttatttcaatagcaacattccttcaacccacatcaacaaccagcagcgttaagctcccataatattc(T)10 |
122 |
482 |
603 |
3 |
33530650 |
33529351 |
Primers |
TRINITY_DN13477_c0_g2_i19 |
Mononucleotide |
(T)12 |
12 |
2878 |
2889 |
3 |
33530650 |
33529351 |
Primers |
TRINITY_DN12746_c3_g4_i6 |
Mononucleotide |
(T)10 |
10 |
1652 |
1661 |
6 |
25412629 |
25417501 |
Primers |
TRINITY_DN12746_c3_g4_i6 |
Mononucleotide |
(T)12 |
12 |
3545 |
3556 |
6 |
25412629 |
25417501 |
Primers |
TRINITY_DN14154_c1_g1_i38 |
Dinucleotide |
(AT)6 |
12 |
255 |
266 |
2 |
1446607 |
1445159 |
Primers |
TRINITY_DN14154_c1_g1_i38 |
Trinucleotide |
(GAA)6 |
18 |
4670 |
4687 |
2 |
1446607 |
1445159 |
Primers |
TRINITY_DN12140_c0_g1_i2 |
Dinucleotide |
(TA)7 |
14 |
4403 |
4416 |
6 |
22623567 |
22621243 |
Primers |
TRINITY_DN12106_c1_g5_i13 |
Trinucleotide |
(GGA)5 |
15 |
5 |
19 |
6 |
18240197 |
18242242 |
Primers |
TRINITY_DN12106_c1_g5_i13 |
Trinucleotide |
(CTC)5 |
15 |
209 |
223 |
6 |
18240197 |
18242242 |
Primers |
TRINITY_DN12106_c1_g5_i13 |
Mononucleotide |
(T)16 |
16 |
2049 |
2064 |
6 |
18240197 |
18242242 |
Primers |
TRINITY_DN11810_c0_g1_i7 |
Mononucleotide |
(T)15 |
15 |
1718 |
1732 |
6 |
29025018 |
29026540 |
Primers |
TRINITY_DN13599_c0_g3_i9 |
Trinucleotide |
(TTC)17 |
51 |
53 |
103 |
1 |
4052692 |
4051126 |
Primers |
TRINITY_DN13599_c0_g3_i9 |
Dinucleotide |
(TA)8 |
16 |
4469 |
4484 |
1 |
4052692 |
4051126 |
Primers |
TRINITY_DN14360_c2_g2_i13 |
Mononucleotide |
(T)20 |
20 |
1734 |
1753 |
5 |
7821612 |
7818520 |
Primers |
TRINITY_DN12638_c0_g1_i8 |
Mononucleotide |
(A)11 |
11 |
550 |
560 |
6 |
15383200 |
15385304 |
Primers |
TRINITY_DN12638_c0_g1_i8 |
Dinucleotide |
(CT)6 |
12 |
4465 |
4476 |
6 |
15383200 |
15385304 |
Primers |
TRINITY_DN12638_c0_g1_i8 |
Mononucleotide |
(A)11 |
11 |
4819 |
4829 |
6 |
15383200 |
15385304 |
Primers |
TRINITY_DN12442_c2_g1_i11 |
Dinucleotide |
(AT)8 |
16 |
66 |
81 |
3 |
1520954 |
1523742 |
Primers |
TRINITY_DN12442_c2_g1_i11 |
Compound |
(T)11c(T)34 |
46 |
4808 |
4853 |
3 |
1520954 |
1523742 |
Primers |
TRINITY_DN14691_c3_g2_i1 |
Mononucleotide |
(A)28 |
28 |
4308 |
4335 |
6 |
28756752 |
28760053 |
Primers |
TRINITY_DN9226_c0_g1_i13 |
Mononucleotide |
(A)12 |
12 |
3007 |
3018 |
4 |
4560550 |
4555695 |
Primers |
TRINITY_DN9226_c0_g1_i13 |
Trinucleotide |
(ATC)5 |
15 |
4304 |
4318 |
4 |
4560550 |
4555695 |
Primers |
TRINITY_DN9226_c0_g1_i13 |
Trinucleotide |
(GAA)8 |
24 |
4599 |
4622 |
4 |
4560550 |
4555695 |
Primers |
TRINITY_DN12161_c0_g1_i1 |
Dinucleotide |
(AG)8 |
16 |
1025 |
1040 |
5 |
21300494 |
21295647 |
Primers |
TRINITY_DN12161_c0_g1_i1 |
Mononucleotide |
(A)13 |
13 |
4579 |
4591 |
5 |
21300494 |
21295647 |
Primers |
TRINITY_DN13901_c4_g1_i5 |
Mononucleotide |
(T)10 |
10 |
659 |
668 |
4 |
9190679 |
9189030 |
Primers |
TRINITY_DN13901_c4_g1_i5 |
Mononucleotide |
(T)16 |
16 |
1309 |
1324 |
4 |
9190679 |
9189030 |
Primers |
TRINITY_DN13901_c4_g1_i5 |
Mononucleotide |
(A)13 |
13 |
2291 |
2303 |
4 |
9190679 |
9189030 |
Primers |
TRINITY_DN13901_c4_g1_i5 |
Mononucleotide |
(T)11 |
11 |
2472 |
2482 |
4 |
9190679 |
9189030 |
Primers |
TRINITY_DN13901_c4_g1_i5 |
Mononucleotide |
(A)10 |
10 |
4822 |
4831 |
4 |
9190679 |
9189030 |
Primers |
TRINITY_DN10583_c0_g1_i5 |
Mononucleotide |
(A)10 |
10 |
2899 |
2908 |
1 |
544378 |
548598 |
Primers |
TRINITY_DN11965_c0_g1_i6 |
Mononucleotide |
(T)10 |
10 |
562 |
571 |
1 |
16316739 |
16315157 |
Primers |
TRINITY_DN12857_c5_g2_i2 |
Mononucleotide |
(A)10 |
10 |
2566 |
2575 |
5 |
4358075 |
4359650 |
Primers |
TRINITY_DN10759_c2_g4_i2 |
Trinucleotide |
(TTC)8 |
24 |
423 |
446 |
3 |
32424224 |
32429062 |
Primers |
TRINITY_DN13493_c2_g1_i2 |
Dinucleotide |
(AG)7 |
14 |
2349 |
2362 |
3 |
27289492 |
27286977 |
Primers |
TRINITY_DN13493_c2_g1_i2 |
Mononucleotide |
(A)13 |
13 |
4198 |
4210 |
3 |
27289492 |
27286977 |
Primers |
TRINITY_DN13493_c2_g1_i2 |
Mononucleotide |
(A)11 |
11 |
4372 |
4382 |
3 |
27289492 |
27286977 |
Primers |
TRINITY_DN13047_c4_g2_i1 |
Mononucleotide |
(A)14 |
14 |
1951 |
1964 |
2 |
21153881 |
21158744 |
Primers |
TRINITY_DN13047_c4_g2_i1 |
Mononucleotide |
(A)16 |
16 |
4689 |
4704 |
2 |
21153881 |
21158744 |
Primers |
TRINITY_DN14185_c2_g1_i3 |
Compound |
(T)10ctctttttcc(T)13 |
33 |
4806 |
4838 |
1 |
3088265 |
3090573 |
Primers |
TRINITY_DN13759_c5_g4_i2 |
Mononucleotide |
(A)10 |
10 |
178 |
187 |
6 |
6547034 |
6549932 |
Primers |
TRINITY_DN13759_c5_g4_i2 |
Mononucleotide |
(A)11 |
11 |
2959 |
2969 |
6 |
6547034 |
6549932 |
Primers |
TRINITY_DN13759_c5_g4_i2 |
Mononucleotide |
(A)11 |
11 |
3531 |
3541 |
6 |
6547034 |
6549932 |
Primers |
TRINITY_DN6440_c0_g1_i2 |
Mononucleotide |
(A)10 |
10 |
146 |
155 |
3 |
702001 |
706836 |
Primers |
TRINITY_DN13064_c0_g1_i1 |
Mononucleotide |
(T)10 |
10 |
1980 |
1989 |
1 |
16752595 |
16751096 |
Primers |
TRINITY_DN14000_c1_g1_i11 |
Compound |
(A)13g(AAGA)6 |
38 |
4557 |
4594 |
3 |
27826270 |
27829001 |
Primers |
TRINITY_DN14432_c4_g1_i4 |
Trinucleotide |
(CTT)5 |
15 |
171 |
185 |
5 |
8261077 |
8262674 |
Primers |
TRINITY_DN14432_c4_g1_i4 |
Mononucleotide |
(T)15 |
15 |
295 |
309 |
5 |
8261077 |
8262674 |
Primers |
TRINITY_DN14432_c4_g1_i4 |
Mononucleotide |
(A)10 |
10 |
4459 |
4468 |
5 |
8261077 |
8262674 |
Primers |
TRINITY_DN14432_c4_g1_i4 |
Mononucleotide |
(T)10 |
10 |
4765 |
4774 |
5 |
8261077 |
8262674 |
Primers |
TRINITY_DN13530_c3_g1_i2 |
Trinucleotide |
(CTT)6 |
18 |
125 |
142 |
6 |
26066222 |
26061538 |
Primers |
TRINITY_DN13530_c3_g1_i2 |
Trinucleotide |
(CTT)6 |
18 |
271 |
288 |
6 |
26066222 |
26061538 |
Primers |
TRINITY_DN13530_c3_g1_i2 |
Mononucleotide |
(T)10 |
10 |
3478 |
3487 |
6 |
26066222 |
26061538 |
Primers |
TRINITY_DN11096_c0_g1_i13 |
Tetranucleotide |
(TTCT)5 |
20 |
3394 |
3413 |
4 |
4298859 |
4301489 |
Primers |
TRINITY_DN11096_c0_g1_i13 |
Trinucleotide |
(ATT)5 |
15 |
4730 |
4744 |
4 |
4298859 |
4301489 |
Primers |
TRINITY_DN11888_c0_g1_i7 |
Dinucleotide |
(TG)9 |
18 |
2529 |
2546 |
6 |
16137563 |
16135293 |
Primers |
TRINITY_DN11888_c0_g1_i7 |
Mononucleotide |
(T)16 |
16 |
3327 |
3342 |
6 |
16137563 |
16135293 |
Primers |
TRINITY_DN12450_c0_g1_i18 |
Mononucleotide |
(A)12 |
12 |
1057 |
1068 |
1 |
24392592 |
24391025 |
Primers |
TRINITY_DN10581_c0_g1_i7 |
Mononucleotide |
(A)13 |
13 |
3507 |
3519 |
1 |
2021273 |
2024451 |
Primers |
TRINITY_DN10581_c0_g1_i7 |
Trinucleotide |
(TCG)5 |
15 |
4719 |
4733 |
1 |
2021273 |
2024451 |
Primers |
TRINITY_DN11728_c0_g1_i7 |
Mononucleotide |
(T)17 |
17 |
586 |
602 |
3 |
39129349 |
39127666 |
Primers |
TRINITY_DN13625_c0_g2_i12 |
Mononucleotide |
(T)12 |
12 |
953 |
964 |
2 |
14008443 |
14010035 |
Primers |
TRINITY_DN13625_c0_g2_i12 |
Mononucleotide |
(T)13 |
13 |
2970 |
2982 |
2 |
14008443 |
14010035 |
Primers |
TRINITY_DN12499_c0_g2_i9 |
Dinucleotide |
(GA)6 |
12 |
1962 |
1973 |
1 |
1545877 |
1543720 |
Primers |
TRINITY_DN10389_c0_g1_i1 |
Mononucleotide |
(T)10 |
10 |
417 |
426 |
6 |
28309002 |
28307306 |
Primers |
TRINITY_DN13714_c1_g1_i9 |
Trinucleotide |
(ATG)5 |
15 |
4664 |
4678 |
4 |
22612909 |
22610874 |
Primers |
TRINITY_DN14121_c1_g1_i11 |
Mononucleotide |
(T)14 |
14 |
192 |
205 |
2 |
5469573 |
5471884 |
Primers |
TRINITY_DN12488_c1_g1_i3 |
Trinucleotide |
(CAG)6 |
18 |
486 |
503 |
7 |
18557593 |
18555378 |
Primers |
TRINITY_DN12488_c1_g1_i3 |
Mononucleotide |
(T)11 |
11 |
4620 |
4630 |
7 |
18557593 |
18555378 |
Primers |
TRINITY_DN12751_c0_g1_i6 |
Mononucleotide |
(T)10 |
10 |
1962 |
1971 |
3 |
14599104 |
14596629 |
Primers |
TRINITY_DN12751_c0_g1_i6 |
Dinucleotide |
(GA)8 |
16 |
2162 |
2177 |
3 |
14599104 |
14596629 |
Primers |
TRINITY_DN12751_c0_g1_i6 |
Trinucleotide |
(TTC)5 |
15 |
4418 |
4432 |
3 |
14599104 |
14596629 |
Primers |
TRINITY_DN13293_c0_g1_i3 |
Mononucleotide |
(T)11 |
11 |
4634 |
4644 |
5 |
9584365 |
9579821 |
Primers |
TRINITY_DN12719_c0_g6_i5 |
Dinucleotide |
(CT)9 |
18 |
2323 |
2340 |
6 |
25563799 |
25560718 |
Primers |
TRINITY_DN12719_c0_g6_i5 |
Pentanucleotide |
(GGAAA)6 |
30 |
2618 |
2647 |
6 |
25563799 |
25560718 |
Primers |
TRINITY_DN12719_c0_g6_i5 |
Mononucleotide |
(A)19 |
19 |
3810 |
3828 |
6 |
25563799 |
25560718 |
Primers |
TRINITY_DN12719_c0_g6_i5 |
Trinucleotide |
(GAA)7 |
21 |
4081 |
4101 |
6 |
25563799 |
25560718 |
Primers |
TRINITY_DN12719_c0_g6_i5 |
Dinucleotide |
(TC)6 |
12 |
4311 |
4322 |
6 |
25563799 |
25560718 |
Primers |
TRINITY_DN11826_c0_g1_i13 |
Mononucleotide |
(A)12 |
12 |
2059 |
2070 |
1 |
22541394 |
22544374 |
Primers |
TRINITY_DN13505_c0_g1_i6 |
Dinucleotide |
(TC)6 |
12 |
3458 |
3469 |
7 |
16094801 |
16097585 |
Primers |
TRINITY_DN13692_c2_g5_i1 |
Mononucleotide |
(T)10 |
10 |
234 |
243 |
7 |
10030672 |
10035465 |
Primers |
TRINITY_DN13692_c2_g5_i1 |
Tetranucleotide |
(GAAA)6 |
24 |
3704 |
3727 |
7 |
10030672 |
10035465 |
Primers |
TRINITY_DN13951_c2_g2_i1 |
Compound |
(AAT)5tagataaaataaagttccagtagtaatcacgatttacgtctgtatcctattaagattcttccattgaaac(A)13 |
98 |
2064 |
2161 |
6 |
15137337 |
15142132 |
Primers |
TRINITY_DN13951_c2_g2_i1 |
Dinucleotide |
(AT)7 |
14 |
2436 |
2449 |
6 |
15137337 |
15142132 |
Primers |
TRINITY_DN13308_c1_g4_i2 |
Compound* |
(T)13(TG)9* |
30 |
604 |
633 |
1 |
3868166 |
3864664 |
Primers |
TRINITY_DN12739_c1_g1_i10 |
Mononucleotide |
(T)10 |
10 |
16 |
25 |
3 |
38598157 |
38599918 |
Primers |
TRINITY_DN12739_c1_g1_i10 |
Dinucleotide |
(AT)6 |
12 |
146 |
157 |
3 |
38598157 |
38599918 |
Primers |
TRINITY_DN12046_c2_g1_i1 |
Compound |
(CTT)7(CCT)7 |
42 |
183 |
224 |
6 |
19850602 |
19849171 |
Primers |
TRINITY_DN12046_c2_g1_i1 |
Mononucleotide |
(A)17 |
17 |
1173 |
1189 |
6 |
19850602 |
19849171 |
Primers |
TRINITY_DN10704_c0_g1_i4 |
Mononucleotide |
(T)11 |
11 |
4772 |
4782 |
5 |
10364524 |
10367861 |
Primers |
TRINITY_DN13135_c0_g1_i4 |
Mononucleotide |
(T)11 |
11 |
180 |
190 |
1 |
21413836 |
21412444 |
Primers |
TRINITY_DN13135_c0_g1_i4 |
Mononucleotide |
(T)10 |
10 |
2314 |
2323 |
1 |
21413836 |
21412444 |
Primers |
TRINITY_DN12912_c2_g2_i21 |
Mononucleotide |
(T)25 |
25 |
639 |
663 |
1 |
15435181 |
15433566 |
Primers |
TRINITY_DN12912_c2_g2_i21 |
Mononucleotide |
(T)10 |
10 |
1268 |
1277 |
1 |
15435181 |
15433566 |
Primers |
TRINITY_DN12912_c2_g2_i21 |
Compound |
(CT)8cactcactcactcacaattctgtttactaattcgcttgtcttcccaattggattcgttgtcactgtaaacatactttgtg(CT)10cactcactcacaattctgtttactaattcgcttgtcttcccaattggattcgttgtcactgtaaacatactttgtg(CT)10 |
212 |
4582 |
4793 |
1 |
15435181 |
15433566 |
Primers |
TRINITY_DN13456_c0_g5_i1 |
Mononucleotide |
(T)10 |
10 |
4605 |
4614 |
1 |
5394038 |
5389969 |
Primers |
TRINITY_DN13595_c0_g4_i2 |
Mononucleotide |
(A)11 |
11 |
275 |
285 |
5 |
9244922 |
9245799 |
Primers |
TRINITY_DN13045_c0_g2_i4 |
Mononucleotide |
(T)13 |
13 |
238 |
250 |
2 |
17674130 |
17671391 |
Primers |
TRINITY_DN13045_c0_g2_i4 |
Mononucleotide |
(T)12 |
12 |
499 |
510 |
2 |
17674130 |
17671391 |
Primers |
TRINITY_DN13045_c0_g2_i4 |
Mononucleotide |
(T)10 |
10 |
716 |
725 |
2 |
17674130 |
17671391 |
Primers |
TRINITY_DN13045_c0_g2_i4 |
Mononucleotide |
(T)15 |
15 |
1635 |
1649 |
2 |
17674130 |
17671391 |
Primers |
TRINITY_DN13045_c0_g2_i4 |
Mononucleotide |
(A)13 |
13 |
3021 |
3033 |
2 |
17674130 |
17671391 |
Primers |
TRINITY_DN13045_c0_g2_i4 |
Dinucleotide |
(TC)12 |
24 |
4744 |
4767 |
2 |
17674130 |
17671391 |
Primers |
TRINITY_DN11661_c1_g1_i13 |
Trinucleotide |
(CTT)5 |
15 |
574 |
588 |
1 |
20325782 |
20321807 |
Primers |
TRINITY_DN12562_c1_g5_i2 |
Dinucleotide |
(TC)12 |
24 |
1 |
24 |
1 |
5692849 |
5697642 |
Primers |
TRINITY_DN12562_c1_g5_i2 |
Tetranucleotide |
(TTCT)7 |
28 |
3852 |
3879 |
1 |
5692849 |
5697642 |
Primers |
TRINITY_DN12075_c2_g1_i9 |
Mononucleotide |
(A)11 |
11 |
4712 |
4722 |
1 |
24614122 |
24611635 |
Primers |
TRINITY_DN14546_c2_g2_i6 |
Mononucleotide |
(A)10 |
10 |
2109 |
2118 |
1 |
22085402 |
22086574 |
Primers |
TRINITY_DN13573_c2_g1_i11 |
Mononucleotide |
(T)11 |
11 |
18 |
28 |
3 |
33018983 |
33020019 |
Primers |
TRINITY_DN13573_c2_g1_i11 |
Mononucleotide |
(A)12 |
12 |
387 |
398 |
3 |
33018983 |
33020019 |
Primers |
TRINITY_DN13807_c0_g1_i6 |
Dinucleotide |
(CT)12 |
24 |
444 |
467 |
1 |
58167 |
59374 |
Primers |
TRINITY_DN13807_c0_g1_i6 |
Dinucleotide |
(AT)9 |
18 |
4025 |
4042 |
1 |
58167 |
59374 |
Primers |
TRINITY_DN12034_c2_g2_i15 |
Mononucleotide |
(T)10 |
10 |
74 |
83 |
1 |
21283894 |
21281565 |
Primers |
TRINITY_DN12034_c2_g2_i15 |
Trinucleotide |
(AAT)5 |
15 |
626 |
640 |
1 |
21283894 |
21281565 |
Primers |
TRINITY_DN12034_c2_g2_i15 |
Trinucleotide |
(GGA)5 |
15 |
3378 |
3392 |
1 |
21283894 |
21281565 |
Primers |
TRINITY_DN11990_c3_g1_i4 |
Mononucleotide |
(T)12 |
12 |
283 |
294 |
1 |
28720482 |
28716061 |
Primers |
TRINITY_DN11990_c3_g1_i4 |
Mononucleotide |
(A)13 |
13 |
2719 |
2731 |
1 |
28720482 |
28716061 |
Primers |
TRINITY_DN11990_c3_g1_i4 |
Mononucleotide |
(A)11 |
11 |
4710 |
4720 |
1 |
28720482 |
28716061 |
Primers |
TRINITY_DN14228_c1_g1_i10 |
Dinucleotide |
(TA)7 |
14 |
3276 |
3289 |
3 |
36761984 |
36763999 |
Primers |
TRINITY_DN14228_c1_g1_i10 |
Trinucleotide |
(TCT)6 |
18 |
4110 |
4127 |
3 |
36761984 |
36763999 |
Primers |
TRINITY_DN12322_c1_g1_i2 |
Mononucleotide |
(T)20 |
20 |
1800 |
1819 |
3 |
30059393 |
30054608 |
Primers |
TRINITY_DN12322_c1_g1_i2 |
Mononucleotide |
(A)12 |
12 |
3011 |
3022 |
3 |
30059393 |
30054608 |
Primers |
TRINITY_DN12322_c1_g1_i2 |
Mononucleotide |
(A)10 |
10 |
4070 |
4079 |
3 |
30059393 |
30054608 |
Primers |
TRINITY_DN13947_c2_g1_i6 |
Mononucleotide |
(A)17 |
17 |
362 |
378 |
2 |
21782051 |
21780660 |
Primers |
TRINITY_DN14749_c23_g1_i5 |
Dinucleotide |
(AT)7 |
14 |
1513 |
1526 |
3 |
16806458 |
16809744 |
Primers |
TRINITY_DN10684_c0_g1_i15 |
Mononucleotide |
(T)17 |
17 |
35 |
51 |
7 |
3014006 |
3010502 |
Primers |
TRINITY_DN10684_c0_g1_i15 |
Mononucleotide |
(T)10 |
10 |
1522 |
1531 |
7 |
3014006 |
3010502 |
Primers |
TRINITY_DN10684_c0_g1_i15 |
Mononucleotide |
(A)10 |
10 |
3377 |
3386 |
7 |
3014006 |
3010502 |
Primers |
TRINITY_DN10684_c0_g1_i15 |
Mononucleotide |
(T)12 |
12 |
3580 |
3591 |
7 |
3014006 |
3010502 |
Primers |
TRINITY_DN14625_c7_g1_i17 |
Mononucleotide |
(T)14 |
14 |
2944 |
2957 |
3 |
26850276 |
26848520 |
Primers |
TRINITY_DN14625_c7_g1_i17 |
Trinucleotide |
(GAA)5 |
15 |
4761 |
4775 |
3 |
26850276 |
26848520 |
Primers |
TRINITY_DN10502_c0_g1_i21 |
Trinucleotide |
(GAA)5 |
15 |
415 |
429 |
6 |
14277198 |
14274299 |
Primers |
TRINITY_DN13074_c1_g1_i10 |
Mononucleotide |
(T)10 |
10 |
604 |
613 |
6 |
9429003 |
9425405 |
Primers |
TRINITY_DN13074_c1_g1_i10 |
Mononucleotide |
(A)10 |
10 |
1770 |
1779 |
6 |
9429003 |
9425405 |
Primers |
TRINITY_DN13074_c1_g1_i10 |
Dinucleotide |
(CA)6 |
12 |
2210 |
2221 |
6 |
9429003 |
9425405 |
Primers |
TRINITY_DN13074_c1_g1_i10 |
Mononucleotide |
(T)13 |
13 |
3096 |
3108 |
6 |
9429003 |
9425405 |
Primers |
TRINITY_DN14451_c0_g2_i21 |
Trinucleotide |
(ATA)5 |
15 |
2267 |
2281 |
1 |
15515515 |
15517807 |
Primers |
TRINITY_DN14451_c0_g2_i21 |
Mononucleotide |
(A)10 |
10 |
2468 |
2477 |
1 |
15515515 |
15517807 |
Primers |
TRINITY_DN14451_c0_g2_i21 |
Dinucleotide |
(CT)10 |
20 |
4622 |
4641 |
1 |
15515515 |
15517807 |
Primers |
TRINITY_DN13995_c0_g1_i15 |
Mononucleotide |
(A)10 |
10 |
1972 |
1981 |
3 |
31316889 |
31317830 |
Primers |
TRINITY_DN13995_c0_g1_i15 |
Dinucleotide |
(AT)6 |
12 |
3801 |
3812 |
3 |
31316889 |
31317830 |
Primers |
TRINITY_DN13199_c2_g1_i5 |
Dinucleotide |
(AT)8 |
16 |
291 |
306 |
4 |
19682304 |
19684085 |
Primers |
TRINITY_DN13199_c2_g1_i5 |
Trinucleotide |
(TAT)6 |
18 |
4115 |
4132 |
4 |
19682304 |
19684085 |
Primers |
TRINITY_DN13447_c1_g6_i1 |
Mononucleotide |
(T)10 |
10 |
814 |
823 |
1 |
1713879 |
1709106 |
Primers |
TRINITY_DN13447_c1_g6_i1 |
Trinucleotide |
(TCT)5 |
15 |
4735 |
4749 |
1 |
1713879 |
1709106 |
Primers |
TRINITY_DN13961_c2_g1_i3 |
Mononucleotide |
(A)13 |
13 |
4221 |
4233 |
6 |
7623832 |
7619969 |
Primers |
TRINITY_DN12135_c1_g2_i5 |
Mononucleotide |
(T)10 |
10 |
1313 |
1322 |
5 |
20253162 |
20248391 |
Primers |
TRINITY_DN13684_c1_g2_i14 |
Dinucleotide |
(CT)6 |
12 |
3932 |
3943 |
3 |
29895881 |
29894697 |
Primers |
TRINITY_DN11906_c0_g2_i7 |
Dinucleotide |
(CT)10 |
20 |
65 |
84 |
3 |
1884988 |
1882179 |
Primers |
TRINITY_DN11906_c0_g2_i7 |
Mononucleotide |
(T)11 |
11 |
376 |
386 |
3 |
1884988 |
1882179 |
Primers |
TRINITY_DN13021_c2_g1_i6 |
Mononucleotide |
(A)11 |
11 |
1470 |
1480 |
6 |
12197191 |
12193729 |
Primers |
TRINITY_DN11575_c3_g2_i6 |
Mononucleotide |
(T)10 |
10 |
1726 |
1735 |
4 |
21052281 |
21055321 |
Primers |
TRINITY_DN11579_c2_g2_i3 |
Compound |
(A)12tccctttcggatatggatctcttcgctgccaatgtcaagaa(CGC)6 |
71 |
253 |
323 |
2 |
20397675 |
20392899 |
Primers |
TRINITY_DN11579_c2_g2_i3 |
Compound |
(ATT)5tt(A)10 |
27 |
1307 |
1333 |
2 |
20397675 |
20392899 |
Primers |
TRINITY_DN11579_c2_g2_i3 |
Trinucleotide |
(TTC)5 |
15 |
2365 |
2379 |
2 |
20397675 |
20392899 |
Primers |
TRINITY_DN11579_c2_g2_i3 |
Mononucleotide |
(T)10 |
10 |
2960 |
2969 |
2 |
20397675 |
20392899 |
Primers |
TRINITY_DN11803_c4_g6_i3 |
Mononucleotide |
(T)11 |
11 |
58 |
68 |
5 |
25270827 |
25275583 |
Primers |
TRINITY_DN14286_c0_g1_i10 |
Trinucleotide |
(TCT)7 |
21 |
87 |
107 |
2 |
5006347 |
5007574 |
Primers |
TRINITY_DN14286_c0_g1_i10 |
Mononucleotide |
(T)10 |
10 |
4372 |
4381 |
2 |
5006347 |
5007574 |
Primers |
TRINITY_DN13687_c1_g3_i12 |
Mononucleotide |
(A)10 |
10 |
52 |
61 |
6 |
6911430 |
6915879 |
Primers |
TRINITY_DN13687_c1_g3_i12 |
Trinucleotide |
(TCT)5 |
15 |
4724 |
4738 |
6 |
6911430 |
6915879 |
Primers |
TRINITY_DN14200_c1_g2_i8 |
Mononucleotide |
(A)14 |
14 |
4236 |
4249 |
7 |
3858128 |
3854710 |
Primers |
TRINITY_DN10892_c2_g1_i1 |
Dinucleotide |
(AT)8 |
16 |
3020 |
3035 |
3 |
9240422 |
9241825 |
Primers |
TRINITY_DN14243_c2_g2_i20 |
Mononucleotide |
(A)10 |
10 |
3197 |
3206 |
1 |
10861057 |
10859192 |
Primers |
TRINITY_DN10759_c2_g2_i12 |
Trinucleotide |
(TCT)6 |
18 |
855 |
872 |
7 |
2867567 |
2869232 |
Primers |
TRINITY_DN11750_c1_g1_i9 |
Dinucleotide |
(TG)11 |
22 |
4670 |
4691 |
3 |
24834467 |
24829716 |
Primers |
TRINITY_DN10841_c0_g1_i9 |
Trinucleotide |
(CTT)6 |
18 |
4638 |
4655 |
3 |
29693386 |
29695929 |
Primers |
TRINITY_DN11399_c1_g2_i8 |
Trinucleotide |
(AAT)5 |
15 |
2521 |
2535 |
1 |
4753237 |
4751265 |
Primers |
TRINITY_DN13840_c0_g1_i8 |
Mononucleotide |
(A)10 |
10 |
1867 |
1876 |
3 |
7333076 |
7334442 |
Primers |
TRINITY_DN11635_c0_g5_i10 |
Mononucleotide |
(A)13 |
13 |
777 |
789 |
2 |
388782 |
387163 |
Primers |
TRINITY_DN11635_c0_g5_i10 |
Dinucleotide |
(AT)6 |
12 |
3929 |
3940 |
2 |
388782 |
387163 |
Primers |
TRINITY_DN11635_c0_g5_i10 |
Mononucleotide |
(A)10 |
10 |
4082 |
4091 |
2 |
388782 |
387163 |
Primers |
TRINITY_DN13898_c1_g2_i2 |
Compound |
(GA)11gtagttgtggagaggaaagaagggactgtttgtttgtctctatttt(AG)6 |
80 |
4650 |
4729 |
5 |
7853170 |
7850557 |
Primers |
TRINITY_DN10802_c0_g1_i12 |
Mononucleotide |
(T)11 |
11 |
542 |
552 |
1 |
22192552 |
22191352 |
Primers |
TRINITY_DN10802_c0_g1_i12 |
Mononucleotide |
(T)14 |
14 |
4573 |
4586 |
1 |
22192552 |
22191352 |
Primers |
TRINITY_DN12383_c0_g6_i2 |
Mononucleotide |
(A)13 |
13 |
4165 |
4177 |
6 |
16547962 |
16543250 |
Primers |
TRINITY_DN11641_c2_g2_i1 |
Mononucleotide |
(A)11 |
11 |
1190 |
1200 |
7 |
11641653 |
11646055 |
Primers |
TRINITY_DN11641_c2_g2_i1 |
Dinucleotide |
(AT)6 |
12 |
1358 |
1369 |
7 |
11641653 |
11646055 |
Primers |
TRINITY_DN11641_c2_g2_i1 |
Mononucleotide |
(A)16 |
16 |
4608 |
4623 |
7 |
11641653 |
11646055 |
Primers |
TRINITY_DN10057_c0_g1_i3 |
Compound |
(T)10gtggtttgtgttcctctctccttttattttattttatg(T)10 |
58 |
1772 |
1829 |
4 |
11575332 |
11580051 |
Primers |
TRINITY_DN10057_c0_g1_i3 |
Mononucleotide |
(T)10 |
10 |
4164 |
4173 |
4 |
11575332 |
11580051 |
Primers |
TRINITY_DN10057_c0_g1_i3 |
Mononucleotide |
(T)13 |
13 |
4566 |
4578 |
4 |
11575332 |
11580051 |
Primers |
TRINITY_DN14002_c2_g4_i4 |
Mononucleotide |
(T)21 |
21 |
2599 |
2619 |
1 |
17956603 |
17961335 |
Primers |
TRINITY_DN14002_c2_g4_i4 |
Mononucleotide |
(T)13 |
13 |
2869 |
2881 |
1 |
17956603 |
17961335 |
Primers |
TRINITY_DN14002_c2_g4_i4 |
Compound |
(GAA)5gagagat(GA)7 |
36 |
4685 |
4720 |
1 |
17956603 |
17961335 |
Primers |
TRINITY_DN13061_c2_g4_i5 |
Mononucleotide |
(A)10 |
10 |
3992 |
4001 |
4 |
22281598 |
22286328 |
Primers |
TRINITY_DN13061_c2_g4_i5 |
Mononucleotide |
(A)10 |
10 |
4127 |
4136 |
4 |
22281598 |
22286328 |
Primers |
TRINITY_DN14211_c0_g1_i1 |
Mononucleotide |
(T)10 |
10 |
468 |
477 |
5 |
20664296 |
20667975 |
Primers |
TRINITY_DN14211_c0_g1_i1 |
Dinucleotide |
(AT)6 |
12 |
1565 |
1576 |
5 |
20664296 |
20667975 |
Primers |
TRINITY_DN11108_c4_g3_i5 |
Mononucleotide |
(T)16 |
16 |
496 |
511 |
2 |
18557807 |
18553931 |
Primers |
TRINITY_DN11108_c4_g3_i5 |
Dinucleotide |
(AG)9 |
18 |
3845 |
3862 |
2 |
18557807 |
18553931 |
Primers |
TRINITY_DN12331_c0_g2_i6 |
Mononucleotide |
(A)15 |
15 |
3970 |
3984 |
2 |
21750378 |
21748207 |
Primers |
TRINITY_DN11718_c1_g1_i9 |
Mononucleotide |
(A)12 |
12 |
911 |
922 |
2 |
5391034 |
5393479 |
Primers |
TRINITY_DN11718_c1_g1_i9 |
Dinucleotide |
(GT)6 |
12 |
1868 |
1879 |
2 |
5391034 |
5393479 |
Primers |
TRINITY_DN11718_c1_g1_i9 |
Mononucleotide |
(A)12 |
12 |
2947 |
2958 |
2 |
5391034 |
5393479 |
Primers |
TRINITY_DN11718_c1_g1_i9 |
Mononucleotide |
(A)18 |
18 |
4454 |
4471 |
2 |
5391034 |
5393479 |
Primers |
TRINITY_DN11643_c0_g1_i4 |
Trinucleotide |
(GAA)7 |
21 |
4574 |
4594 |
3 |
5484392 |
5482185 |
Primers |
TRINITY_DN13368_c3_g1_i8 |
Mononucleotide |
(A)10 |
10 |
792 |
801 |
2 |
22720203 |
22718498 |
Primers |
TRINITY_DN11832_c0_g3_i12 |
Trinucleotide |
(TTC)5 |
15 |
89 |
103 |
5 |
3431034 |
3428767 |
Primers |
TRINITY_DN11832_c0_g3_i12 |
Mononucleotide |
(T)12 |
12 |
814 |
825 |
5 |
3431034 |
3428767 |
Primers |
TRINITY_DN11832_c0_g3_i12 |
Dinucleotide |
(AT)7 |
14 |
4640 |
4653 |
5 |
3431034 |
3428767 |
Primers |
TRINITY_DN13503_c1_g3_i7 |
Mononucleotide |
(A)12 |
12 |
2660 |
2671 |
1 |
18168113 |
18165519 |
Primers |
TRINITY_DN11434_c1_g6_i1 |
Dinucleotide |
(CT)6 |
12 |
100 |
111 |
6 |
14092295 |
14088924 |
Primers |
TRINITY_DN11434_c1_g6_i1 |
Mononucleotide |
(T)10 |
10 |
292 |
301 |
6 |
14092295 |
14088924 |
Primers |
TRINITY_DN11178_c0_g1_i10 |
Mononucleotide |
(T)10 |
10 |
165 |
174 |
2 |
17852777 |
17848424 |
Primers |
TRINITY_DN11178_c0_g1_i10 |
Mononucleotide |
(A)11 |
11 |
4030 |
4040 |
2 |
17852777 |
17848424 |
Primers |
TRINITY_DN9662_c0_g1_i4 |
Mononucleotide |
(T)10 |
10 |
707 |
716 |
2 |
20881918 |
20879444 |
Primers |
TRINITY_DN9662_c0_g1_i4 |
Mononucleotide |
(A)10 |
10 |
4227 |
4236 |
2 |
20881918 |
20879444 |
Primers |
TRINITY_DN12914_c0_g2_i4 |
Mononucleotide |
(T)12 |
12 |
73 |
84 |
2 |
15493379 |
15491912 |
Primers |
TRINITY_DN14664_c5_g1_i11 |
Mononucleotide |
(A)11 |
11 |
74 |
84 |
2 |
20576787 |
20574619 |
Primers |
TRINITY_DN14664_c5_g1_i11 |
Mononucleotide |
(A)20 |
20 |
482 |
501 |
2 |
20576787 |
20574619 |
Primers |
TRINITY_DN14664_c5_g1_i11 |
Dinucleotide |
(TG)6 |
12 |
2062 |
2073 |
2 |
20576787 |
20574619 |
Primers |
TRINITY_DN14664_c5_g1_i11 |
Mononucleotide |
(A)10 |
10 |
2355 |
2364 |
2 |
20576787 |
20574619 |
Primers |
TRINITY_DN11494_c3_g3_i22 |
Compound |
(TTC)7tttggagtctatgagagagagaagcttggaaagggaaatcagtttctcttccaaaatcttcttcttcctctcttttctctttca(T)12 |
117 |
2128 |
2244 |
3 |
29433449 |
29434955 |
Primers |
TRINITY_DN11494_c3_g3_i22 |
Dinucleotide |
(TC)11 |
22 |
2375 |
2396 |
3 |
29433449 |
29434955 |
Primers |
TRINITY_DN11769_c0_g2_i9 |
Mononucleotide |
(T)12 |
12 |
76 |
87 |
3 |
34353132 |
34354376 |
Primers |
TRINITY_DN11697_c1_g2_i5 |
Mononucleotide |
(A)28 |
28 |
2079 |
2106 |
5 |
8719831 |
8715732 |
Primers |
TRINITY_DN11697_c1_g2_i5 |
Dinucleotide |
(AG)19 |
38 |
4664 |
4701 |
5 |
8719831 |
8715732 |
Primers |
TRINITY_DN13112_c4_g1_i4 |
Compound |
(TA)10cacattt(TG)6 |
39 |
61 |
99 |
7 |
14807098 |
14803938 |
Primers |
TRINITY_DN13503_c1_g1_i19 |
Pentanucleotide |
(GAAAC)5 |
25 |
4351 |
4375 |
1 |
22836878 |
22835656 |
Primers |
TRINITY_DN12980_c0_g3_i21 |
Mononucleotide |
(A)10 |
10 |
190 |
199 |
5 |
24797322 |
24798841 |
Primers |
TRINITY_DN12980_c0_g3_i21 |
Dinucleotide |
(TA)12 |
24 |
607 |
630 |
5 |
24797322 |
24798841 |
Primers |
TRINITY_DN12604_c1_g1_i2 |
Dinucleotide |
(CT)17 |
34 |
31 |
64 |
7 |
18504920 |
18509633 |
Primers |
TRINITY_DN12604_c1_g1_i2 |
Mononucleotide |
(T)11 |
11 |
631 |
641 |
7 |
18504920 |
18509633 |
Primers |
TRINITY_DN14285_c1_g2_i9 |
Trinucleotide |
(GAA)9 |
27 |
362 |
388 |
1 |
5878713 |
5880119 |
Primers |
TRINITY_DN14279_c1_g2_i4 |
Mononucleotide |
(A)14 |
14 |
2171 |
2184 |
3 |
11572892 |
11569385 |
Primers |
TRINITY_DN14279_c1_g2_i4 |
Mononucleotide |
(T)11 |
11 |
2573 |
2583 |
3 |
11572892 |
11569385 |
Primers |
TRINITY_DN14279_c1_g2_i4 |
Mononucleotide |
(A)18 |
18 |
4140 |
4157 |
3 |
11572892 |
11569385 |
Primers |
TRINITY_DN10612_c0_g1_i18 |
Dinucleotide |
(GA)12 |
24 |
2381 |
2404 |
3 |
6230578 |
6233375 |
Primers |
TRINITY_DN12023_c1_g4_i1 |
Mononucleotide |
(A)24 |
24 |
1675 |
1698 |
7 |
14386728 |
14389977 |
Primers |
TRINITY_DN12023_c1_g4_i1 |
Mononucleotide |
(A)10 |
10 |
1954 |
1963 |
7 |
14386728 |
14389977 |
Primers |
TRINITY_DN12380_c1_g1_i18 |
Mononucleotide |
(T)26 |
26 |
2357 |
2382 |
6 |
19471223 |
19473243 |
Primers |
TRINITY_DN13594_c0_g1_i22 |
Trinucleotide |
(GAA)6 |
18 |
4639 |
4656 |
2 |
5365979 |
5367306 |
Primers |
TRINITY_DN13762_c2_g1_i9 |
Compound |
(T)11attcttctgattattttgtaaggagtcatatactatctcttcattatttcaaattttcaatgaaattttatttccgtttt(A)11 |
102 |
3542 |
3643 |
5 |
436193 |
432573 |
Primers |
TRINITY_DN13688_c0_g2_i3 |
Mononucleotide |
(T)14 |
14 |
5 |
18 |
2 |
16253749 |
16249037 |
Primers |
TRINITY_DN13688_c0_g2_i3 |
Mononucleotide |
(A)11 |
11 |
163 |
173 |
2 |
16253749 |
16249037 |
Primers |
TRINITY_DN13688_c0_g2_i3 |
Dinucleotide |
(TA)9 |
18 |
478 |
495 |
2 |
16253749 |
16249037 |
Primers |
TRINITY_DN13688_c0_g2_i3 |
Mononucleotide |
(A)11 |
11 |
2023 |
2033 |
2 |
16253749 |
16249037 |
Primers |
TRINITY_DN13688_c0_g2_i3 |
Mononucleotide |
(A)13 |
13 |
4377 |
4389 |
2 |
16253749 |
16249037 |
Primers |
TRINITY_DN13688_c0_g2_i3 |
Dinucleotide |
(AG)7 |
14 |
4640 |
4653 |
2 |
16253749 |
16249037 |
Primers |
TRINITY_DN13146_c0_g1_i3 |
Mononucleotide |
(T)18 |
18 |
3958 |
3975 |
2 |
22517835 |
22515998 |
Primers |
TRINITY_DN9656_c0_g1_i5 |
Dinucleotide |
(AG)6 |
12 |
853 |
864 |
4 |
8859179 |
8854483 |
Primers |
TRINITY_DN9656_c0_g1_i5 |
Dinucleotide |
(GA)6 |
12 |
4608 |
4619 |
4 |
8859179 |
8854483 |
Primers |
TRINITY_DN12837_c1_g1_i1 |
Mononucleotide |
(T)10 |
10 |
1798 |
1807 |
5 |
7558473 |
7555499 |
Primers |
TRINITY_DN14222_c0_g1_i3 |
Mononucleotide |
(T)13 |
13 |
571 |
583 |
1 |
22773389 |
22771890 |
Primers |
TRINITY_DN11704_c0_g1_i1 |
Mononucleotide |
(T)12 |
12 |
391 |
402 |
5 |
3687151 |
3691860 |
Primers |
TRINITY_DN14037_c0_g1_i5 |
Dinucleotide |
(CT)6 |
12 |
433 |
444 |
4 |
8960320 |
8957230 |
Primers |
TRINITY_DN14037_c0_g1_i5 |
Mononucleotide |
(A)27 |
27 |
4159 |
4185 |
4 |
8960320 |
8957230 |
Primers |
TRINITY_DN12549_c0_g1_i13 |
Dinucleotide |
(TA)7 |
14 |
4224 |
4237 |
6 |
984481 |
987259 |
Primers |
TRINITY_DN9047_c0_g1_i1 |
Mononucleotide |
(C)13 |
13 |
1 |
13 |
3 |
31453545 |
31455862 |
Primers |
TRINITY_DN9047_c0_g1_i1 |
Mononucleotide |
(G)13 |
13 |
4684 |
4696 |
3 |
31453545 |
31455862 |
Primers |
TRINITY_DN12975_c1_g1_i8 |
Mononucleotide |
(A)11 |
11 |
620 |
630 |
7 |
6757122 |
6758308 |
Primers |
TRINITY_DN12975_c1_g1_i8 |
Mononucleotide |
(A)10 |
10 |
4534 |
4543 |
7 |
6757122 |
6758308 |
Primers |
TRINITY_DN12084_c1_g2_i5 |
Compound |
(TA)9cacacacacatacatgtgccctg(T)10gttaggttaacttcattaattttatagttaaatgttgcattttaccttatttaccattttttaaaggg(A)10gaaagaaaaata(AG)7 |
155 |
3863 |
4017 |
6 |
14973447 |
14972355 |
Primers |
TRINITY_DN12084_c1_g2_i5 |
Mononucleotide |
(A)11 |
11 |
4319 |
4329 |
6 |
14973447 |
14972355 |
Primers |
TRINITY_DN12390_c1_g1_i9 |
Mononucleotide |
(T)17 |
17 |
10 |
26 |
6 |
25313284 |
25308591 |
Primers |
TRINITY_DN12390_c1_g1_i9 |
Dinucleotide |
(GA)6 |
12 |
1337 |
1348 |
6 |
25313284 |
25308591 |
Primers |
TRINITY_DN12390_c1_g1_i9 |
Dinucleotide |
(AT)6 |
12 |
3227 |
3238 |
6 |
25313284 |
25308591 |
Primers |
TRINITY_DN12390_c1_g1_i9 |
Compound |
(AG)8gaaacggcacacaccaaagagaaggaatcccgggcaatccccgtgcgatccctcctcaaaacccaaaaaac(T)10 |
97 |
3990 |
4086 |
6 |
25313284 |
25308591 |
Primers |
TRINITY_DN12446_c0_g1_i2 |
Mononucleotide |
(A)14 |
14 |
2802 |
2815 |
4 |
4383028 |
4380000 |
Primers |
TRINITY_DN11571_c0_g2_i9 |
Mononucleotide |
(A)10 |
10 |
22 |
31 |
1 |
23249853 |
23245156 |
Primers |
TRINITY_DN11571_c0_g2_i9 |
Trinucleotide |
(TTC)5 |
15 |
3849 |
3863 |
1 |
23249853 |
23245156 |
Primers |
TRINITY_DN11571_c0_g2_i9 |
Mononucleotide |
(A)23 |
23 |
4586 |
4608 |
1 |
23249853 |
23245156 |
Primers |
TRINITY_DN11317_c0_g5_i7 |
Pentanucleotide |
(TAAAA)5 |
25 |
42 |
66 |
6 |
4967027 |
4971716 |
Primers |
TRINITY_DN14631_c0_g1_i6 |
Mononucleotide |
(A)10 |
10 |
3416 |
3425 |
7 |
13607515 |
13612177 |
Primers |
TRINITY_DN14381_c1_g1_i1 |
Mononucleotide |
(T)11 |
11 |
369 |
379 |
3 |
30188265 |
30191882 |
Primers |
TRINITY_DN14381_c1_g1_i1 |
Compound |
(AAG)8aaaagaaactctttcctcctattggtcaaaatagtctcacaaatttaaaag(A)11 |
86 |
928 |
1013 |
3 |
30188265 |
30191882 |
Primers |
TRINITY_DN14381_c1_g1_i1 |
Mononucleotide |
(T)11 |
11 |
3677 |
3687 |
3 |
30188265 |
30191882 |
Primers |
TRINITY_DN11672_c2_g2_i10 |
Mononucleotide |
(T)10 |
10 |
3137 |
3146 |
7 |
13113098 |
13117644 |
Primers |
TRINITY_DN13027_c0_g1_i12 |
Dinucleotide |
(CT)7 |
14 |
3258 |
3271 |
7 |
9055093 |
9057648 |
Primers |
TRINITY_DN10903_c4_g2_i1 |
Dinucleotide |
(TA)13 |
26 |
79 |
104 |
1 |
1207057 |
1210161 |
Primers |
TRINITY_DN10903_c4_g2_i1 |
Dinucleotide |
(TA)7 |
14 |
4023 |
4036 |
1 |
1207057 |
1210161 |
Primers |
TRINITY_DN10903_c4_g2_i1 |
Mononucleotide |
(T)10 |
10 |
4386 |
4395 |
1 |
1207057 |
1210161 |
Primers |
TRINITY_DN11630_c1_g1_i5 |
Mononucleotide |
(A)13 |
13 |
1891 |
1903 |
5 |
19895807 |
19893976 |
Primers |
TRINITY_DN11630_c1_g1_i5 |
Dinucleotide |
(AT)7 |
14 |
2574 |
2587 |
5 |
19895807 |
19893976 |
Primers |
TRINITY_DN11630_c1_g1_i5 |
Mononucleotide |
(A)23 |
23 |
4005 |
4027 |
5 |
19895807 |
19893976 |
Primers |
TRINITY_DN11331_c0_g1_i1 |
Compound |
(T)12gtaaatttggacccttatgaaaaactttgtttttctaacttttcc(A)10 |
67 |
1147 |
1213 |
5 |
6460309 |
6457942 |
Primers |
TRINITY_DN12515_c0_g1_i16 |
Trinucleotide |
(TGC)5 |
15 |
811 |
825 |
5 |
8148239 |
8149999 |
Primers |
TRINITY_DN12515_c0_g1_i16 |
Mononucleotide |
(T)11 |
11 |
1805 |
1815 |
5 |
8148239 |
8149999 |
Primers |
TRINITY_DN11739_c0_g1_i3 |
Mononucleotide |
(A)11 |
11 |
4591 |
4601 |
2 |
3652895 |
3656885 |
Primers |
TRINITY_DN11541_c1_g1_i3 |
Trinucleotide |
(CAT)5 |
15 |
646 |
660 |
6 |
18800368 |
18805049 |
Primers |
TRINITY_DN11541_c1_g1_i3 |
Dinucleotide |
(TA)7 |
14 |
1602 |
1615 |
6 |
18800368 |
18805049 |
Primers |
TRINITY_DN11541_c1_g1_i3 |
Dinucleotide |
(GA)6 |
12 |
2968 |
2979 |
6 |
18800368 |
18805049 |
Primers |
TRINITY_DN12386_c1_g1_i4 |
Compound |
(A)20caaaaaaaaac(A)12 |
43 |
62 |
104 |
7 |
16585379 |
16583147 |
Primers |
TRINITY_DN12386_c1_g1_i4 |
Trinucleotide |
(TAT)7 |
21 |
937 |
957 |
7 |
16585379 |
16583147 |
Primers |
TRINITY_DN12386_c1_g1_i4 |
Mononucleotide |
(T)11 |
11 |
3043 |
3053 |
7 |
16585379 |
16583147 |
Primers |
TRINITY_DN12368_c7_g2_i2 |
Mononucleotide |
(T)13 |
13 |
461 |
473 |
1 |
27505699 |
27502082 |
Primers |
TRINITY_DN12169_c1_g1_i2 |
Mononucleotide |
(T)13 |
13 |
826 |
838 |
2 |
19447680 |
19449310 |
Primers |
TRINITY_DN12169_c1_g1_i2 |
Mononucleotide |
(T)24 |
24 |
4320 |
4343 |
2 |
19447680 |
19449310 |
Primers |
TRINITY_DN14004_c1_g2_i8 |
Tetranucleotide |
(TTTG)5 |
20 |
310 |
329 |
7 |
18525830 |
18523736 |
Primers |
TRINITY_DN14004_c1_g2_i8 |
Mononucleotide |
(T)10 |
10 |
3929 |
3938 |
7 |
18525830 |
18523736 |
Primers |
TRINITY_DN12384_c1_g3_i14 |
Mononucleotide |
(T)17 |
17 |
55 |
71 |
6 |
19824921 |
19826685 |
Primers |
TRINITY_DN12384_c1_g3_i14 |
Compound |
(A)11cataattatgatgcagccaacagctct(A)10 |
48 |
2083 |
2130 |
6 |
19824921 |
19826685 |
Primers |
TRINITY_DN12384_c1_g3_i14 |
Mononucleotide |
(T)10 |
10 |
4231 |
4240 |
6 |
19824921 |
19826685 |
Primers |
TRINITY_DN12384_c1_g3_i14 |
Trinucleotide |
(GAA)5 |
15 |
4392 |
4406 |
6 |
19824921 |
19826685 |
Primers |
TRINITY_DN12384_c1_g3_i14 |
Dinucleotide |
(GA)9 |
18 |
4584 |
4601 |
6 |
19824921 |
19826685 |
Primers |
TRINITY_DN12517_c1_g3_i5 |
Mononucleotide |
(A)11 |
11 |
4367 |
4377 |
1 |
4464457 |
4466006 |
Primers |
TRINITY_DN12787_c2_g2_i9 |
Trinucleotide |
(TTA)5 |
15 |
2070 |
2084 |
7 |
18018891 |
18015699 |
Primers |
TRINITY_DN12787_c2_g2_i9 |
Mononucleotide |
(A)15 |
15 |
3103 |
3117 |
7 |
18018891 |
18015699 |
Primers |
TRINITY_DN12787_c2_g2_i9 |
Dinucleotide |
(AT)6 |
12 |
3978 |
3989 |
7 |
18018891 |
18015699 |
Primers |
TRINITY_DN11120_c0_g1_i8 |
Mononucleotide |
(A)11 |
11 |
324 |
334 |
2 |
12357054 |
12354755 |
Primers |
TRINITY_DN11120_c0_g1_i8 |
Mononucleotide |
(A)24 |
24 |
3900 |
3923 |
2 |
12357054 |
12354755 |
Primers |
TRINITY_DN11120_c0_g1_i8 |
Dinucleotide |
(AG)9 |
18 |
4502 |
4519 |
2 |
12357054 |
12354755 |
Primers |
TRINITY_DN11983_c2_g3_i2 |
Mononucleotide |
(T)16 |
16 |
600 |
615 |
7 |
18286675 |
18288290 |
Primers |
TRINITY_DN11983_c2_g3_i2 |
Mononucleotide |
(T)11 |
11 |
1042 |
1052 |
7 |
18286675 |
18288290 |
Primers |
TRINITY_DN11983_c2_g3_i2 |
Trinucleotide |
(CAT)6 |
18 |
3962 |
3979 |
7 |
18286675 |
18288290 |
Primers |
TRINITY_DN11961_c2_g1_i17 |
Compound |
(T)26gt(TTG)6 |
46 |
1 |
46 |
5 |
16338364 |
16336427 |
Primers |
TRINITY_DN11961_c2_g1_i17 |
Dinucleotide |
(CT)8 |
16 |
410 |
425 |
5 |
16338364 |
16336427 |
Primers |
TRINITY_DN11961_c2_g1_i17 |
Dinucleotide |
(TC)7 |
14 |
628 |
641 |
5 |
16338364 |
16336427 |
Primers |
TRINITY_DN11961_c2_g1_i17 |
Trinucleotide |
(TCT)7 |
21 |
1028 |
1048 |
5 |
16338364 |
16336427 |
Primers |
TRINITY_DN7008_c0_g1_i2 |
Mononucleotide |
(T)11 |
11 |
625 |
635 |
3 |
27343379 |
27348049 |
Primers |
TRINITY_DN7008_c0_g1_i2 |
Dinucleotide |
(GA)6 |
12 |
1764 |
1775 |
3 |
27343379 |
27348049 |
Primers |
TRINITY_DN13418_c3_g4_i14 |
Dinucleotide |
(AG)8 |
16 |
814 |
829 |
3 |
27298192 |
27300336 |
Primers |
TRINITY_DN13418_c3_g4_i14 |
Dinucleotide |
(GA)7 |
14 |
2661 |
2674 |
3 |
27298192 |
27300336 |
Primers |
TRINITY_DN13418_c3_g4_i14 |
Compound |
(TTA)6tatgtcatgaaaaaacggaaaaacaggatatatgtcccctcgtccaacatggtatagatgaaatgaaaaaggaagtaatcaaaagaagtttcaggcat(A)10 |
126 |
4063 |
4188 |
3 |
27298192 |
27300336 |
Primers |
TRINITY_DN13418_c3_g4_i14 |
Compound |
(CT)8cccttcctctcactctccgctttcttttcttcccccgaaaaat(TAA)5 |
74 |
4595 |
4668 |
3 |
27298192 |
27300336 |
Primers |
TRINITY_DN13491_c1_g1_i2 |
Mononucleotide |
(A)10 |
10 |
650 |
659 |
7 |
13476312 |
13479528 |
Primers |
TRINITY_DN13897_c0_g7_i4 |
Mononucleotide |
(A)15 |
15 |
1335 |
1349 |
4 |
10701599 |
10704255 |
Primers |
TRINITY_DN13897_c0_g7_i4 |
Mononucleotide |
(A)10 |
10 |
3990 |
3999 |
4 |
10701599 |
10704255 |
Primers |
TRINITY_DN12507_c0_g1_i1 |
Trinucleotide |
(AGA)6 |
18 |
1782 |
1799 |
5 |
3733076 |
3732113 |
Primers |
TRINITY_DN11945_c0_g2_i15 |
Dinucleotide |
(CT)6 |
12 |
1 |
12 |
7 |
15114708 |
15112167 |
Primers |
TRINITY_DN11945_c0_g2_i15 |
Mononucleotide |
(T)11 |
11 |
199 |
209 |
7 |
15114708 |
15112167 |
Primers |
TRINITY_DN11577_c1_g1_i1 |
Mononucleotide |
(A)16 |
16 |
314 |
329 |
4 |
21068594 |
21071169 |
Primers |
TRINITY_DN14285_c2_g1_i10 |
Trinucleotide |
(AAG)7 |
21 |
4579 |
4599 |
2 |
289023 |
286135 |
Primers |
TRINITY_DN12972_c0_g1_i11 |
Mononucleotide |
(A)15 |
15 |
4304 |
4318 |
5 |
7966788 |
7964517 |
Primers |
TRINITY_DN14085_c2_g1_i2 |
Mononucleotide |
(T)10 |
10 |
317 |
326 |
7 |
2253497 |
2255859 |
Primers |
TRINITY_DN14085_c2_g1_i2 |
Dinucleotide |
(AT)13 |
26 |
2305 |
2330 |
7 |
2253497 |
2255859 |
Primers |
TRINITY_DN8857_c0_g1_i1 |
Mononucleotide |
(T)10 |
10 |
4641 |
4650 |
1 |
4436758 |
4432093 |
Primers |
TRINITY_DN11155_c3_g1_i10 |
Mononucleotide |
(T)11 |
11 |
167 |
177 |
2 |
7569720 |
7567591 |
Primers |
TRINITY_DN11155_c3_g1_i10 |
Mononucleotide |
(T)11 |
11 |
2326 |
2336 |
2 |
7569720 |
7567591 |
Primers |
TRINITY_DN11155_c3_g1_i10 |
Mononucleotide |
(T)10 |
10 |
4649 |
4658 |
2 |
7569720 |
7567591 |
Primers |
TRINITY_DN13381_c1_g1_i3 |
Mononucleotide |
(A)11 |
11 |
292 |
302 |
3 |
37963323 |
37964893 |
Primers |
TRINITY_DN13381_c1_g1_i3 |
Compound |
(ACT)6aactaataataaaccttatcaaaagatttaaaaacatagaaaatgggttcat(TTTTA)5(AT)11 |
117 |
1313 |
1429 |
3 |
37963323 |
37964893 |
Primers |
TRINITY_DN13381_c1_g1_i3 |
Dinucleotide |
(AC)7 |
14 |
3162 |
3175 |
3 |
37963323 |
37964893 |
Primers |
TRINITY_DN13670_c3_g1_i4 |
Dinucleotide |
(GA)9 |
18 |
579 |
596 |
1 |
19180556 |
19183159 |
Primers |
TRINITY_DN13670_c3_g1_i4 |
Mononucleotide |
(A)15 |
15 |
2576 |
2590 |
1 |
19180556 |
19183159 |
Primers |
TRINITY_DN13670_c3_g1_i4 |
Dinucleotide |
(TC)6 |
12 |
2783 |
2794 |
1 |
19180556 |
19183159 |
Primers |
TRINITY_DN11632_c0_g2_i13 |
Mononucleotide |
(T)12 |
12 |
262 |
273 |
5 |
16678023 |
16673364 |
Primers |
TRINITY_DN11632_c0_g2_i13 |
Trinucleotide |
(TTA)5 |
15 |
1257 |
1271 |
5 |
16678023 |
16673364 |
Primers |
TRINITY_DN11632_c0_g2_i13 |
Trinucleotide |
(GAT)5 |
15 |
4592 |
4606 |
5 |
16678023 |
16673364 |
Primers |
TRINITY_DN13075_c1_g1_i2 |
Mononucleotide |
(A)10 |
10 |
4391 |
4400 |
4 |
14736399 |
14733394 |
Primers |
TRINITY_DN12454_c0_g1_i11 |
Mononucleotide |
(T)14 |
14 |
345 |
358 |
4 |
3739595 |
3740696 |
Primers |
TRINITY_DN10852_c0_g1_i6 |
Trinucleotide |
(TTC)10 |
30 |
21 |
50 |
2 |
1245246 |
1247068 |
Primers |
TRINITY_DN14316_c1_g1_i4 |
Mononucleotide |
(T)21 |
21 |
793 |
813 |
5 |
16535356 |
16533149 |
Primers |
TRINITY_DN14316_c1_g1_i4 |
Mononucleotide |
(T)10 |
10 |
1458 |
1467 |
5 |
16535356 |
16533149 |
Primers |
TRINITY_DN14316_c1_g1_i4 |
Dinucleotide |
(GA)6 |
12 |
4386 |
4397 |
5 |
16535356 |
16533149 |
Primers |
TRINITY_DN13130_c1_g1_i14 |
Compound |
(GAG)5(GAA)5 |
30 |
4461 |
4490 |
4 |
420871 |
419750 |
Primers |
TRINITY_DN12968_c1_g3_i2 |
Mononucleotide |
(A)15 |
15 |
137 |
151 |
2 |
1869481 |
1872024 |
Primers |
TRINITY_DN13183_c2_g1_i3 |
Dinucleotide |
(TA)8 |
16 |
95 |
110 |
2 |
17010146 |
17011289 |
Primers |
TRINITY_DN13183_c2_g1_i3 |
Mononucleotide |
(A)10 |
10 |
3845 |
3854 |
2 |
17010146 |
17011289 |
Primers |
TRINITY_DN13183_c2_g1_i3 |
Mononucleotide |
(T)19 |
19 |
4621 |
4639 |
2 |
17010146 |
17011289 |
Primers |
TRINITY_DN12160_c3_g1_i1 |
Compound |
(T)12catcaaacataatctctttcattaaggg(A)10 |
50 |
1612 |
1661 |
4 |
17352775 |
17350104 |
Primers |
TRINITY_DN10888_c3_g2_i1 |
Trinucleotide |
(TCT)8 |
24 |
58 |
81 |
6 |
27767365 |
27771970 |
Primers |
TRINITY_DN10888_c3_g2_i1 |
Dinucleotide |
(TC)6 |
12 |
528 |
539 |
6 |
27767365 |
27771970 |
Primers |
TRINITY_DN10888_c3_g2_i1 |
Mononucleotide |
(T)14 |
14 |
2550 |
2563 |
6 |
27767365 |
27771970 |
Primers |
TRINITY_DN9965_c0_g1_i9 |
Mononucleotide |
(A)10 |
10 |
3207 |
3216 |
4 |
20302695 |
20298046 |
Primers |
TRINITY_DN9529_c0_g1_i4 |
Mononucleotide |
(A)10 |
10 |
4401 |
4410 |
7 |
18372220 |
18367575 |
Primers |
TRINITY_DN10700_c0_g1_i2 |
Mononucleotide |
(A)11 |
11 |
874 |
884 |
6 |
28548702 |
28545832 |
Primers |
TRINITY_DN12878_c3_g2_i3 |
Mononucleotide |
(A)13 |
13 |
483 |
495 |
7 |
3221597 |
3224623 |
Primers |
TRINITY_DN12878_c3_g2_i3 |
Trinucleotide |
(GAA)7 |
21 |
4174 |
4194 |
7 |
3221597 |
3224623 |
Primers |
TRINITY_DN12878_c3_g2_i3 |
Dinucleotide |
(TA)10 |
20 |
4435 |
4454 |
7 |
3221597 |
3224623 |
Primers |
TRINITY_DN11666_c2_g6_i4 |
Mononucleotide |
(A)12 |
12 |
19 |
30 |
2 |
15851186 |
15847772 |
Primers |
TRINITY_DN11666_c2_g6_i4 |
Mononucleotide |
(T)18 |
18 |
3523 |
3540 |
2 |
15851186 |
15847772 |
Primers |
TRINITY_DN12343_c2_g2_i10 |
Trinucleotide |
(TCT)6 |
18 |
52 |
69 |
5 |
23790235 |
23794887 |
Primers |
TRINITY_DN12343_c2_g2_i10 |
Mononucleotide |
(A)16 |
16 |
1224 |
1239 |
5 |
23790235 |
23794887 |
Primers |
TRINITY_DN11272_c6_g2_i1 |
Mononucleotide |
(T)12 |
12 |
3299 |
3310 |
5 |
3363954 |
3361500 |
Primers |
TRINITY_DN11272_c6_g2_i1 |
Trinucleotide |
(GAA)9 |
27 |
4166 |
4192 |
5 |
3363954 |
3361500 |
Primers |
TRINITY_DN11539_c1_g1_i9 |
Compound |
(T)14gaaagg(A)10 |
30 |
678 |
707 |
6 |
7237177 |
7234955 |
Primers |
TRINITY_DN11539_c1_g1_i9 |
Mononucleotide |
(T)10 |
10 |
2314 |
2323 |
6 |
7237177 |
7234955 |
Primers |
TRINITY_DN14295_c0_g2_i16 |
Mononucleotide |
(A)18 |
18 |
306 |
323 |
3 |
15717699 |
15715234 |
Primers |
TRINITY_DN12188_c2_g1_i7 |
Mononucleotide |
(A)21 |
21 |
2873 |
2893 |
7 |
891226 |
886590 |
Primers |
TRINITY_DN12188_c2_g1_i7 |
Dinucleotide |
(GA)9 |
18 |
3206 |
3223 |
7 |
891226 |
886590 |
Primers |
TRINITY_DN12188_c2_g1_i7 |
Mononucleotide |
(A)10 |
10 |
4228 |
4237 |
7 |
891226 |
886590 |
Primers |
TRINITY_DN13844_c2_g2_i1 |
Compound |
(AC)8(A)16 |
32 |
2657 |
2688 |
7 |
7388645 |
7385604 |
Primers |
TRINITY_DN12681_c7_g7_i8 |
Mononucleotide |
(T)12 |
12 |
646 |
657 |
3 |
27350301 |
27354938 |
Primers |
TRINITY_DN12681_c7_g7_i8 |
Mononucleotide |
(A)10 |
10 |
2645 |
2654 |
3 |
27350301 |
27354938 |
Primers |
TRINITY_DN12681_c7_g7_i8 |
Mononucleotide |
(A)16 |
16 |
3458 |
3473 |
3 |
27350301 |
27354938 |
Primers |
TRINITY_DN12681_c7_g7_i8 |
Compound |
(TC)7tttctg(AT)9 |
38 |
4545 |
4582 |
3 |
27350301 |
27354938 |
Primers |
TRINITY_DN13696_c2_g1_i1 |
Mononucleotide |
(T)10 |
10 |
152 |
161 |
Scaffold000113 |
285230 |
283335 |
Primers |
TRINITY_DN13696_c2_g1_i1 |
Mononucleotide |
(T)10 |
10 |
3405 |
3414 |
Scaffold000113 |
285230 |
283335 |
Primers |
TRINITY_DN12933_c2_g2_i13 |
Mononucleotide |
(A)11 |
11 |
953 |
963 |
3 |
25140258 |
25135624 |
Primers |
TRINITY_DN12933_c2_g2_i13 |
Mononucleotide |
(A)16 |
16 |
2517 |
2532 |
3 |
25140258 |
25135624 |
Primers |
TRINITY_DN14147_c0_g1_i8 |
Mononucleotide |
(A)10 |
10 |
3961 |
3970 |
4 |
14106850 |
14103966 |
Primers |
TRINITY_DN14124_c0_g1_i5 |
Trinucleotide |
(ATG)8 |
24 |
179 |
202 |
6 |
3733317 |
3729940 |
Primers |
TRINITY_DN14124_c0_g1_i5 |
Mononucleotide |
(T)12 |
12 |
3241 |
3252 |
6 |
3733317 |
3729940 |
Primers |
TRINITY_DN14124_c0_g1_i5 |
Mononucleotide |
(A)12 |
12 |
3499 |
3510 |
6 |
3733317 |
3729940 |
Primers |
TRINITY_DN14049_c1_g1_i15 |
Trinucleotide |
(GAA)6 |
18 |
1137 |
1154 |
4 |
3205233 |
3207645 |
Primers |
TRINITY_DN14049_c1_g1_i15 |
Mononucleotide |
(T)18 |
18 |
2212 |
2229 |
4 |
3205233 |
3207645 |
Primers |
TRINITY_DN14049_c1_g1_i15 |
Mononucleotide |
(T)12 |
12 |
2428 |
2439 |
4 |
3205233 |
3207645 |
Primers |
TRINITY_DN12703_c1_g1_i7 |
Compound |
(T)11cttttgttcttttgcttcgccttgaatcgaaatccaaaatactcaaaatccttcgagaaaaaaagga(AAAC)5 |
98 |
68 |
165 |
6 |
3080027 |
3084050 |
Primers |
TRINITY_DN12703_c1_g1_i7 |
Mononucleotide |
(T)29 |
29 |
285 |
313 |
6 |
3080027 |
3084050 |
Primers |
TRINITY_DN13885_c0_g1_i5 |
Dinucleotide |
(AT)6 |
12 |
358 |
369 |
5 |
18979244 |
18978661 |
Primers |
TRINITY_DN14460_c0_g1_i7 |
Dinucleotide |
(AT)10 |
20 |
69 |
88 |
3 |
27218183 |
27216275 |
Primers |
TRINITY_DN14460_c0_g1_i7 |
Mononucleotide |
(A)10 |
10 |
4203 |
4212 |
3 |
27218183 |
27216275 |
Primers |
TRINITY_DN14460_c0_g1_i7 |
Dinucleotide |
(TA)7 |
14 |
4395 |
4408 |
3 |
27218183 |
27216275 |
Primers |
TRINITY_DN10695_c0_g1_i5 |
Compound |
(AT)7t(A)10 |
25 |
3798 |
3822 |
3 |
9880742 |
9878988 |
Primers |
TRINITY_DN11825_c2_g1_i6 |
Dinucleotide |
(GA)6 |
12 |
3 |
14 |
6 |
10650364 |
10651267 |
Primers |
TRINITY_DN11825_c2_g1_i6 |
Mononucleotide |
(A)11 |
11 |
1168 |
1178 |
6 |
10650364 |
10651267 |
Primers |
TRINITY_DN14593_c3_g1_i11 |
Trinucleotide |
(TCT)13 |
39 |
101 |
139 |
4 |
8679956 |
8676060 |
Primers |
TRINITY_DN14593_c3_g1_i11 |
Mononucleotide |
(T)10 |
10 |
1799 |
1808 |
4 |
8679956 |
8676060 |
Primers |
TRINITY_DN14593_c3_g1_i11 |
Dinucleotide |
(AT)21 |
42 |
4586 |
4627 |
4 |
8679956 |
8676060 |
Primers |
TRINITY_DN11103_c0_g1_i1 |
Mononucleotide |
(T)10 |
10 |
841 |
850 |
5 |
18072181 |
18076807 |
Primers |
TRINITY_DN11103_c0_g1_i1 |
Mononucleotide |
(T)11 |
11 |
995 |
1005 |
5 |
18072181 |
18076807 |
Primers |
TRINITY_DN11103_c0_g1_i1 |
Mononucleotide |
(A)10 |
10 |
4256 |
4265 |
5 |
18072181 |
18076807 |
Primers |
TRINITY_DN14234_c2_g3_i5 |
Trinucleotide |
(GAA)10 |
30 |
992 |
1021 |
6 |
19593018 |
19596618 |
Primers |
TRINITY_DN11313_c0_g1_i5 |
Trinucleotide |
(GAA)5 |
15 |
4403 |
4417 |
1 |
16094040 |
16095690 |
Primers |
TRINITY_DN9295_c0_g1_i3 |
Mononucleotide |
(A)11 |
11 |
2845 |
2855 |
6 |
13610715 |
13615339 |
Primers |
TRINITY_DN9295_c0_g1_i3 |
Mononucleotide |
(T)11 |
11 |
3067 |
3077 |
6 |
13610715 |
13615339 |
Primers |
TRINITY_DN14444_c0_g2_i18 |
Mononucleotide |
(T)13 |
13 |
1027 |
1039 |
5 |
20268215 |
20270530 |
Primers |
TRINITY_DN14444_c0_g2_i18 |
Mononucleotide |
(T)12 |
12 |
3437 |
3448 |
5 |
20268215 |
20270530 |
Primers |
TRINITY_DN13934_c6_g9_i1 |
Mononucleotide |
(T)18 |
18 |
17 |
34 |
5 |
11912264 |
11916887 |
Primers |
TRINITY_DN13934_c6_g9_i1 |
Mononucleotide |
(T)10 |
10 |
1084 |
1093 |
5 |
11912264 |
11916887 |
Primers |
TRINITY_DN13653_c4_g6_i2 |
Mononucleotide |
(T)10 |
10 |
1573 |
1582 |
1 |
11199788 |
11195709 |
Primers |
TRINITY_DN13653_c4_g6_i2 |
Dinucleotide |
(AT)10 |
20 |
3999 |
4018 |
1 |
11199788 |
11195709 |
Primers |
TRINITY_DN14537_c3_g3_i5 |
Mononucleotide |
(T)10 |
10 |
1805 |
1814 |
4 |
10722086 |
10717803 |
Primers |
TRINITY_DN11448_c0_g3_i6 |
Dinucleotide |
(TC)6 |
12 |
4528 |
4539 |
6 |
3519776 |
3515604 |
Primers |
TRINITY_DN13370_c1_g3_i5 |
Pentanucleotide |
(AATAA)10 |
50 |
72 |
121 |
3 |
28350593 |
28349061 |
Primers |
TRINITY_DN13370_c1_g3_i5 |
Mononucleotide |
(A)11 |
11 |
478 |
488 |
3 |
28350593 |
28349061 |
Primers |
TRINITY_DN13370_c1_g3_i5 |
Dinucleotide |
(TC)10 |
20 |
4561 |
4580 |
3 |
28350593 |
28349061 |
Primers |
TRINITY_DN10378_c0_g1_i11 |
Mononucleotide |
(A)10 |
10 |
2601 |
2610 |
3 |
6459530 |
6457087 |
Primers |
TRINITY_DN10378_c0_g1_i11 |
Mononucleotide |
(A)10 |
10 |
3312 |
3321 |
3 |
6459530 |
6457087 |
Primers |
TRINITY_DN12184_c4_g2_i1 |
Mononucleotide |
(A)10 |
10 |
367 |
376 |
2 |
20557685 |
20560192 |
Primers |
TRINITY_DN12586_c0_g1_i1 |
Mononucleotide |
(T)12 |
12 |
4132 |
4143 |
1 |
14908638 |
14904026 |
Primers |
TRINITY_DN8561_c0_g1_i3 |
Mononucleotide |
(T)10 |
10 |
656 |
665 |
6 |
20664474 |
20659857 |
Primers |
TRINITY_DN8561_c0_g1_i3 |
Dinucleotide |
(AG)6 |
12 |
4162 |
4173 |
6 |
20664474 |
20659857 |
Primers |
TRINITY_DN8905_c0_g1_i7 |
Mononucleotide |
(A)10 |
10 |
2857 |
2866 |
1 |
4770571 |
4765961 |
Primers |
TRINITY_DN14300_c1_g1_i12 |
Dinucleotide |
(GT)6 |
12 |
2749 |
2760 |
5 |
14655366 |
14656682 |
Primers |
TRINITY_DN14300_c1_g1_i12 |
Compound* |
(TTC)5aatttctcttaaaaaagaaccaat(ACA)7(A)12* |
71 |
4189 |
4259 |
5 |
14655366 |
14656682 |
Primers |
TRINITY_DN11757_c0_g1_i9 |
Mononucleotide |
(T)10 |
10 |
4146 |
4155 |
6 |
5353188 |
5355801 |
Primers |
TRINITY_DN13841_c0_g4_i1 |
Mononucleotide |
(A)21 |
21 |
3796 |
3816 |
Scaffold000004_5 |
9614 |
11924 |
Primers |
TRINITY_DN13841_c0_g4_i1 |
Dinucleotide |
(TC)7 |
14 |
4157 |
4170 |
Scaffold000004_5 |
9614 |
11924 |
Primers |
TRINITY_DN13386_c1_g2_i1 |
Mononucleotide |
(T)10 |
10 |
2484 |
2493 |
5 |
19391791 |
19387187 |
Primers |
TRINITY_DN13386_c1_g2_i1 |
Mononucleotide |
(T)10 |
10 |
3110 |
3119 |
5 |
19391791 |
19387187 |
Primers |
TRINITY_DN13386_c1_g2_i1 |
Mononucleotide |
(T)17 |
17 |
3229 |
3245 |
5 |
19391791 |
19387187 |
Primers |
TRINITY_DN10436_c0_g1_i15 |
Mononucleotide |
(A)12 |
12 |
67 |
78 |
3 |
924503 |
928168 |
Primers |
TRINITY_DN11169_c0_g1_i2 |
Mononucleotide |
(T)10 |
10 |
2555 |
2564 |
1 |
15675100 |
15672567 |
Primers |
TRINITY_DN13656_c3_g2_i4 |
Mononucleotide |
(A)11 |
11 |
4223 |
4233 |
6 |
22889331 |
22893933 |
Primers |
TRINITY_DN12498_c0_g3_i11 |
Compound |
(TCA)5(TCT)8 |
39 |
93 |
131 |
3 |
15335514 |
15332912 |
Primers |
TRINITY_DN12498_c0_g3_i11 |
Mononucleotide |
(A)13 |
13 |
3147 |
3159 |
3 |
15335514 |
15332912 |
Primers |
TRINITY_DN11807_c0_g2_i6 |
Dinucleotide |
(TC)6 |
12 |
1726 |
1737 |
1 |
15626273 |
15627818 |
Primers |
TRINITY_DN11807_c0_g2_i6 |
Dinucleotide |
(CA)6 |
12 |
2171 |
2182 |
1 |
15626273 |
15627818 |
Primers |
TRINITY_DN13288_c1_g2_i1 |
Mononucleotide |
(T)14 |
14 |
4082 |
4095 |
5 |
7643027 |
7641111 |
Primers |
TRINITY_DN14253_c2_g2_i3 |
Compound |
(T)10c(T)11 |
22 |
19 |
40 |
4 |
22236754 |
22234580 |
Primers |
TRINITY_DN14253_c2_g2_i3 |
Mononucleotide |
(T)10 |
10 |
352 |
361 |
4 |
22236754 |
22234580 |
Primers |
TRINITY_DN14253_c2_g2_i3 |
Mononucleotide |
(T)11 |
11 |
3742 |
3752 |
4 |
22236754 |
22234580 |
Primers |
TRINITY_DN11429_c2_g1_i6 |
Dinucleotide |
(CT)9 |
18 |
151 |
168 |
3 |
3656722 |
3658681 |
Primers |
TRINITY_DN11429_c2_g1_i6 |
Compound* |
(GTT)6(T)11* |
27 |
398 |
424 |
3 |
3656722 |
3658681 |
Primers |
TRINITY_DN11429_c2_g1_i6 |
Mononucleotide |
(T)10 |
10 |
2545 |
2554 |
3 |
3656722 |
3658681 |
Primers |
TRINITY_DN13508_c1_g1_i6 |
Mononucleotide |
(A)14 |
14 |
3900 |
3913 |
5 |
23079583 |
23077254 |
Primers |
TRINITY_DN14428_c1_g2_i5 |
Dinucleotide |
(AT)8 |
16 |
229 |
244 |
3 |
8973568 |
8968982 |
Primers |
TRINITY_DN14428_c1_g2_i5 |
Mononucleotide |
(T)11 |
11 |
951 |
961 |
3 |
8973568 |
8968982 |
Primers |
TRINITY_DN14428_c1_g2_i5 |
Trinucleotide |
(AAT)7 |
21 |
3946 |
3966 |
3 |
8973568 |
8968982 |
Primers |
TRINITY_DN12820_c1_g1_i3 |
Mononucleotide |
(T)13 |
13 |
2841 |
2853 |
2 |
21532363 |
21530613 |
Primers |
TRINITY_DN14447_c3_g1_i7 |
Dinucleotide |
(CA)6 |
12 |
2264 |
2275 |
4 |
9348009 |
9345737 |
Primers |
TRINITY_DN14349_c1_g2_i7 |
Dinucleotide |
(AG)8 |
16 |
73 |
88 |
6 |
1305574 |
1308669 |
Primers |
TRINITY_DN14349_c1_g2_i7 |
Dinucleotide |
(TA)6 |
12 |
375 |
386 |
6 |
1305574 |
1308669 |
Primers |
TRINITY_DN14349_c1_g2_i7 |
Mononucleotide |
(A)10 |
10 |
1268 |
1277 |
6 |
1305574 |
1308669 |
Primers |
TRINITY_DN14349_c1_g2_i7 |
Dinucleotide |
(AC)11 |
22 |
1490 |
1511 |
6 |
1305574 |
1308669 |
Primers |
TRINITY_DN14349_c1_g2_i7 |
Dinucleotide |
(TC)14 |
28 |
1943 |
1970 |
6 |
1305574 |
1308669 |
Primers |
TRINITY_DN12135_c1_g4_i10 |
Tetranucleotide |
(TTTG)5 |
20 |
36 |
55 |
3 |
28229076 |
28233653 |
Primers |
TRINITY_DN12135_c1_g4_i10 |
Mononucleotide |
(T)13 |
13 |
220 |
232 |
3 |
28229076 |
28233653 |
Primers |
TRINITY_DN12135_c1_g4_i10 |
Mononucleotide |
(A)22 |
22 |
874 |
895 |
3 |
28229076 |
28233653 |
Primers |
TRINITY_DN11934_c0_g1_i12 |
Dinucleotide |
(AG)6 |
12 |
2456 |
2467 |
6 |
6009816 |
6008091 |
Primers |
TRINITY_DN12559_c7_g1_i13 |
Mononucleotide |
(A)12 |
12 |
1237 |
1248 |
3 |
30544844 |
30547515 |
Primers |
TRINITY_DN12559_c7_g1_i13 |
Mononucleotide |
(A)17 |
17 |
2068 |
2084 |
3 |
30544844 |
30547515 |
Primers |
TRINITY_DN12613_c3_g1_i9 |
Mononucleotide |
(T)11 |
11 |
419 |
429 |
6 |
27413466 |
27415200 |
Primers |
TRINITY_DN12613_c3_g1_i9 |
Compound |
(TG)6gttgtgc(AG)6 |
31 |
4330 |
4360 |
6 |
27413466 |
27415200 |
Primers |
TRINITY_DN13959_c2_g6_i4 |
Dinucleotide |
(AT)12 |
24 |
1927 |
1950 |
6 |
11685556 |
11688205 |
Primers |
TRINITY_DN12766_c2_g1_i13 |
Dinucleotide |
(AT)8 |
16 |
3803 |
3818 |
2 |
15321017 |
15319477 |
Primers |
TRINITY_DN12153_c0_g1_i10 |
Mononucleotide |
(A)10 |
10 |
3112 |
3121 |
1 |
8655687 |
8651107 |
Primers |
TRINITY_DN12389_c2_g2_i7 |
Compound |
(TCT)10ctctctctgtactcttcactcact(CA)9(CT)6 |
84 |
16 |
99 |
Scaffold000106_3 |
1952 |
4819 |
Primers |
TRINITY_DN12389_c2_g2_i7 |
Dinucleotide |
(TC)8 |
16 |
3393 |
3408 |
Scaffold000106_3 |
1952 |
4819 |
Primers |
TRINITY_DN12389_c2_g2_i7 |
Mononucleotide |
(T)25 |
25 |
4550 |
4574 |
Scaffold000106_3 |
1952 |
4819 |
Primers |
TRINITY_DN11299_c1_g2_i2 |
Trinucleotide |
(TTC)7 |
21 |
86 |
106 |
5 |
3487469 |
3489453 |
Primers |
TRINITY_DN11299_c1_g2_i2 |
Dinucleotide |
(TC)7 |
14 |
316 |
329 |
5 |
3487469 |
3489453 |
Primers |
TRINITY_DN11299_c1_g2_i2 |
Mononucleotide |
(A)15 |
15 |
1318 |
1332 |
5 |
3487469 |
3489453 |
Primers |
TRINITY_DN11299_c1_g2_i2 |
Mononucleotide |
(T)11 |
11 |
2224 |
2234 |
5 |
3487469 |
3489453 |
Primers |
TRINITY_DN12208_c2_g2_i2 |
Hexanucleotide |
(AGAAGG)5 |
30 |
4540 |
4569 |
1 |
1043434 |
1040958 |
Primers |
TRINITY_DN12533_c0_g5_i3 |
Compound |
(T)10g(T)10 |
21 |
226 |
246 |
3 |
8761731 |
8757853 |
Primers |
TRINITY_DN12533_c0_g5_i3 |
Dinucleotide |
(TC)9 |
18 |
4361 |
4378 |
3 |
8761731 |
8757853 |
Primers |
TRINITY_DN12170_c1_g1_i7 |
Mononucleotide |
(T)14 |
14 |
1330 |
1343 |
1 |
23734369 |
23731846 |
Primers |
TRINITY_DN13941_c0_g4_i3 |
Dinucleotide |
(GA)8 |
16 |
305 |
320 |
4 |
22743978 |
22746238 |
Primers |
TRINITY_DN13941_c0_g4_i3 |
Dinucleotide |
(AG)7 |
14 |
808 |
821 |
4 |
22743978 |
22746238 |
Primers |
TRINITY_DN13941_c0_g4_i3 |
Dinucleotide |
(AT)11 |
22 |
2274 |
2295 |
4 |
22743978 |
22746238 |
Primers |
TRINITY_DN13941_c0_g4_i3 |
Dinucleotide |
(CT)7 |
14 |
3748 |
3761 |
4 |
22743978 |
22746238 |
Primers |
TRINITY_DN13941_c0_g4_i3 |
Dinucleotide |
(CT)8 |
16 |
4248 |
4263 |
4 |
22743978 |
22746238 |
Primers |
TRINITY_DN13692_c2_g1_i3 |
Mononucleotide |
(A)10 |
10 |
355 |
364 |
2 |
12190916 |
12188551 |
Primers |
TRINITY_DN13692_c2_g1_i3 |
Mononucleotide |
(A)26 |
26 |
3655 |
3680 |
2 |
12190916 |
12188551 |
Primers |
TRINITY_DN13449_c4_g1_i3 |
Mononucleotide |
(T)13 |
13 |
425 |
437 |
Scaffold000276 |
1 |
3562 |
Primers |
TRINITY_DN13449_c4_g1_i3 |
Mononucleotide |
(T)10 |
10 |
703 |
712 |
Scaffold000276 |
1 |
3562 |
Primers |
TRINITY_DN13449_c4_g1_i3 |
Mononucleotide |
(T)16 |
16 |
975 |
990 |
Scaffold000276 |
1 |
3562 |
Primers |
TRINITY_DN12272_c0_g3_i5 |
Dinucleotide |
(TG)13 |
26 |
2349 |
2374 |
3 |
2438917 |
2440318 |
Primers |
TRINITY_DN12272_c0_g3_i5 |
Dinucleotide |
(TC)8 |
16 |
2572 |
2587 |
3 |
2438917 |
2440318 |
Primers |
TRINITY_DN12272_c0_g3_i5 |
Mononucleotide |
(A)10 |
10 |
4443 |
4452 |
3 |
2438917 |
2440318 |
Primers |
TRINITY_DN13601_c2_g1_i30 |
Compound* |
(TAT)5(T)10* |
24 |
1061 |
1084 |
7 |
7680571 |
7679892 |
Primers |
TRINITY_DN11378_c0_g1_i9 |
Mononucleotide |
(A)12 |
12 |
89 |
100 |
3 |
8921318 |
8919614 |
Primers |
TRINITY_DN11378_c0_g1_i9 |
Dinucleotide |
(TC)6 |
12 |
225 |
236 |
3 |
8921318 |
8919614 |
Primers |
TRINITY_DN11378_c0_g1_i9 |
Mononucleotide |
(A)10 |
10 |
1659 |
1668 |
3 |
8921318 |
8919614 |
Primers |
TRINITY_DN11378_c0_g1_i9 |
Dinucleotide |
(AT)6 |
12 |
1948 |
1959 |
3 |
8921318 |
8919614 |
Primers |
TRINITY_DN14624_c1_g1_i5 |
Dinucleotide |
(CT)6 |
12 |
63 |
74 |
2 |
4466390 |
4463260 |
Primers |
TRINITY_DN14624_c1_g1_i5 |
Mononucleotide |
(T)10 |
10 |
1437 |
1446 |
2 |
4466390 |
4463260 |
Primers |
TRINITY_DN14624_c1_g1_i5 |
Trinucleotide |
(TAT)5 |
15 |
4386 |
4400 |
2 |
4466390 |
4463260 |
Primers |
TRINITY_DN14624_c1_g1_i5 |
Mononucleotide |
(T)16 |
16 |
4540 |
4555 |
2 |
4466390 |
4463260 |
Primers |
TRINITY_DN12204_c0_g1_i9 |
Dinucleotide |
(AG)8 |
16 |
4381 |
4396 |
1 |
19865144 |
19862664 |
Primers |
TRINITY_DN12585_c2_g1_i3 |
Mononucleotide |
(A)14 |
14 |
76 |
89 |
1 |
27228675 |
27229825 |
Primers |
TRINITY_DN11736_c1_g1_i6 |
Dinucleotide |
(AG)7 |
14 |
584 |
597 |
3 |
8659380 |
8656240 |
Primers |
TRINITY_DN12866_c1_g4_i4 |
Mononucleotide |
(A)10 |
10 |
1358 |
1367 |
3 |
727498 |
724553 |
Primers |
TRINITY_DN12866_c1_g4_i4 |
Trinucleotide |
(CTT)5 |
15 |
4450 |
4464 |
3 |
727498 |
724553 |
Primers |
TRINITY_DN11672_c2_g4_i2 |
Dinucleotide |
(AC)7 |
14 |
2170 |
2183 |
3 |
10992791 |
10988236 |
Primers |
TRINITY_DN11672_c2_g4_i2 |
Mononucleotide |
(A)10 |
10 |
2995 |
3004 |
3 |
10992791 |
10988236 |
Primers |
TRINITY_DN11672_c2_g4_i2 |
Mononucleotide |
(A)17 |
17 |
3833 |
3849 |
3 |
10992791 |
10988236 |
Primers |
TRINITY_DN12843_c1_g2_i12 |
Dinucleotide |
(CT)8 |
16 |
68 |
83 |
3 |
27772226 |
27775507 |
Primers |
TRINITY_DN12843_c1_g2_i12 |
Mononucleotide |
(T)11 |
11 |
476 |
486 |
3 |
27772226 |
27775507 |
Primers |
TRINITY_DN13524_c0_g6_i5 |
Compound |
(TCT)10ta(TTC)5 |
47 |
281 |
327 |
6 |
19275713 |
19277868 |
Primers |
TRINITY_DN13494_c1_g2_i7 |
Compound |
(AGA)6ataagaataaa(AAG)6 |
47 |
4445 |
4491 |
3 |
34887101 |
34888362 |
Primers |
TRINITY_DN14674_c0_g1_i11 |
Trinucleotide |
(CGC)6 |
18 |
96 |
113 |
3 |
23635255 |
23638997 |
Primers |
TRINITY_DN13608_c0_g2_i12 |
Trinucleotide |
(ATT)5 |
15 |
148 |
162 |
4 |
18495420 |
18493732 |
Primers |
TRINITY_DN13608_c0_g2_i12 |
Trinucleotide |
(TAA)5 |
15 |
409 |
423 |
4 |
18495420 |
18493732 |
Primers |
TRINITY_DN13608_c0_g2_i12 |
Dinucleotide |
(AT)6 |
12 |
1039 |
1050 |
4 |
18495420 |
18493732 |
Primers |
TRINITY_DN12935_c1_g3_i6 |
Mononucleotide |
(T)10 |
10 |
1822 |
1831 |
2 |
1009347 |
1006693 |
Primers |
TRINITY_DN10491_c0_g1_i1 |
Mononucleotide |
(A)10 |
10 |
4027 |
4036 |
2 |
6798373 |
6794461 |
Primers |
TRINITY_DN13747_c0_g1_i19 |
Compound |
(T)14aatattttattatctaacaacagcaaatcatctccatttct(A)10 |
65 |
44 |
108 |
2 |
324490 |
323145 |
Primers |
TRINITY_DN13747_c0_g1_i19 |
Mononucleotide |
(T)11 |
11 |
3132 |
3142 |
2 |
324490 |
323145 |
Primers |
TRINITY_DN11484_c2_g5_i8 |
Trinucleotide |
(TTC)8 |
24 |
60 |
83 |
5 |
19811334 |
19808316 |
Primers |
TRINITY_DN11484_c2_g5_i8 |
Mononucleotide |
(A)12 |
12 |
2749 |
2760 |
5 |
19811334 |
19808316 |
Primers |
TRINITY_DN12255_c2_g2_i4 |
Mononucleotide |
(T)12 |
12 |
380 |
391 |
7 |
4134042 |
4136697 |
Primers |
TRINITY_DN12805_c0_g1_i2 |
Mononucleotide |
(T)10 |
10 |
574 |
583 |
3 |
34878970 |
34876777 |
Primers |
TRINITY_DN12805_c0_g1_i2 |
Mononucleotide |
(T)14 |
14 |
3427 |
3440 |
3 |
34878970 |
34876777 |
Primers |
TRINITY_DN10356_c0_g1_i1 |
Mononucleotide |
(A)11 |
11 |
2855 |
2865 |
6 |
23847173 |
23843773 |
Primers |
TRINITY_DN11470_c1_g2_i1 |
Dinucleotide |
(TA)9 |
18 |
22 |
39 |
3 |
5347327 |
5343675 |
Primers |
TRINITY_DN11470_c1_g2_i1 |
Mononucleotide |
(A)10 |
10 |
269 |
278 |
3 |
5347327 |
5343675 |
Primers |
TRINITY_DN11470_c1_g2_i1 |
Trinucleotide |
(TTG)6 |
18 |
1587 |
1604 |
3 |
5347327 |
5343675 |
Primers |
TRINITY_DN13496_c0_g2_i7 |
Mononucleotide |
(T)16 |
16 |
1153 |
1168 |
1 |
9794453 |
9793067 |
Primers |
TRINITY_DN12997_c3_g4_i17 |
Mononucleotide |
(T)15 |
15 |
222 |
236 |
3 |
19503956 |
19500435 |
Primers |
TRINITY_DN12997_c3_g4_i17 |
Dinucleotide |
(AT)11 |
22 |
375 |
396 |
3 |
19503956 |
19500435 |
Primers |
TRINITY_DN12997_c3_g4_i17 |
Compound |
(TC)6ttgaccttatctccctattttctccattatttccgtggaaggatgatataaatataataat(CAC)5 |
88 |
650 |
737 |
3 |
19503956 |
19500435 |
Primers |
TRINITY_DN12997_c3_g4_i17 |
Mononucleotide |
(T)10 |
10 |
989 |
998 |
3 |
19503956 |
19500435 |
Primers |
TRINITY_DN12997_c3_g4_i17 |
Dinucleotide |
(AG)6 |
12 |
1715 |
1726 |
3 |
19503956 |
19500435 |
Primers |
TRINITY_DN13114_c0_g1_i7 |
Dinucleotide |
(TC)8 |
16 |
3961 |
3976 |
5 |
25215799 |
25214916 |
Primers |
TRINITY_DN13273_c2_g2_i13 |
Mononucleotide |
(A)12 |
12 |
3275 |
3286 |
1 |
22918491 |
22916927 |
Primers |
TRINITY_DN14319_c0_g5_i1 |
Trinucleotide |
(GAA)10 |
30 |
1 |
30 |
3 |
31020738 |
31025270 |
Primers |
TRINITY_DN11725_c0_g1_i4 |
Mononucleotide |
(A)11 |
11 |
3210 |
3220 |
7 |
15342041 |
15343569 |
Primers |
TRINITY_DN12602_c1_g1_i1 |
Dinucleotide |
(TA)6 |
12 |
4412 |
4423 |
1 |
1402102 |
1403324 |
Primers |
TRINITY_DN13560_c6_g2_i4 |
Mononucleotide |
(A)10 |
10 |
116 |
125 |
3 |
4666815 |
4664172 |
Primers |
TRINITY_DN13801_c0_g1_i2 |
Mononucleotide |
(T)11 |
11 |
380 |
390 |
7 |
15962068 |
15965194 |
Primers |
TRINITY_DN12798_c1_g2_i4 |
Compound |
(GA)9tatagaatattggttttgttaaggtgcgtctgttcttgttcctcactttattttagaatata(GTG)6 |
98 |
3967 |
4064 |
2 |
146968 |
151491 |
Primers |
TRINITY_DN12460_c2_g6_i4 |
Dinucleotide |
(TA)8 |
16 |
204 |
219 |
4 |
20100147 |
20103420 |
Primers |
TRINITY_DN12460_c2_g6_i4 |
Dinucleotide |
(AG)18 |
36 |
3234 |
3269 |
4 |
20100147 |
20103420 |
Primers |
TRINITY_DN12383_c0_g7_i1 |
Trinucleotide |
(TCT)6 |
18 |
255 |
272 |
6 |
24330420 |
24325896 |
Primers |
TRINITY_DN10788_c0_g2_i16 |
Mononucleotide |
(T)13 |
13 |
385 |
397 |
6 |
12438120 |
12434632 |
Primers |
TRINITY_DN10788_c0_g2_i16 |
Mononucleotide |
(T)16 |
16 |
512 |
527 |
6 |
12438120 |
12434632 |
Primers |
TRINITY_DN12539_c1_g5_i5 |
Mononucleotide |
(A)11 |
11 |
2450 |
2460 |
6 |
10481382 |
10476853 |
Primers |
TRINITY_DN9582_c0_g1_i10 |
Mononucleotide |
(T)31 |
31 |
676 |
706 |
1 |
7544706 |
7542164 |
Primers |
TRINITY_DN8986_c0_g1_i7 |
Trinucleotide |
(GTC)6 |
18 |
1 |
18 |
7 |
140486 |
143774 |
Primers |
TRINITY_DN11650_c3_g6_i3 |
Trinucleotide |
(AGA)10 |
30 |
4158 |
4187 |
6 |
22527863 |
22532353 |
Primers |
TRINITY_DN10816_c0_g1_i6 |
Mononucleotide |
(T)11 |
11 |
2396 |
2406 |
6 |
6617603 |
6615357 |
Primers |
TRINITY_DN10816_c0_g1_i6 |
Mononucleotide |
(A)11 |
11 |
4345 |
4355 |
6 |
6617603 |
6615357 |
Primers |
TRINITY_DN14604_c1_g1_i8 |
Mononucleotide |
(A)11 |
11 |
1176 |
1186 |
7 |
19055434 |
19054285 |
Primers |
TRINITY_DN14604_c1_g1_i8 |
Mononucleotide |
(A)10 |
10 |
1591 |
1600 |
7 |
19055434 |
19054285 |
Primers |
TRINITY_DN11527_c1_g3_i9 |
Dinucleotide |
(TA)6 |
12 |
56 |
67 |
3 |
26143843 |
26145847 |
Primers |
TRINITY_DN11527_c1_g3_i9 |
Dinucleotide |
(AT)8 |
16 |
2364 |
2379 |
3 |
26143843 |
26145847 |
Primers |
TRINITY_DN11527_c1_g3_i9 |
Mononucleotide |
(T)13 |
13 |
4057 |
4069 |
3 |
26143843 |
26145847 |
Primers |
TRINITY_DN14179_c0_g1_i3 |
Mononucleotide |
(A)10 |
10 |
39 |
48 |
2 |
130383 |
125867 |
Primers |
TRINITY_DN14179_c0_g1_i3 |
Mononucleotide |
(A)12 |
12 |
182 |
193 |
2 |
130383 |
125867 |
Primers |
TRINITY_DN14179_c0_g1_i3 |
Trinucleotide |
(CTC)5 |
15 |
887 |
901 |
2 |
130383 |
125867 |
Primers |
TRINITY_DN14179_c0_g1_i3 |
Dinucleotide |
(CT)6 |
12 |
4350 |
4361 |
2 |
130383 |
125867 |
Primers |
TRINITY_DN12447_c1_g5_i10 |
Mononucleotide |
(T)10 |
10 |
2963 |
2972 |
7 |
15507605 |
15505683 |
Primers |
TRINITY_DN13128_c2_g4_i6 |
Mononucleotide |
(A)10 |
10 |
1218 |
1227 |
1 |
454366 |
458456 |
Primers |
TRINITY_DN13128_c2_g4_i6 |
Mononucleotide |
(A)10 |
10 |
3596 |
3605 |
1 |
454366 |
458456 |
Primers |
TRINITY_DN13128_c2_g4_i6 |
Dinucleotide |
(AC)8 |
16 |
4077 |
4092 |
1 |
454366 |
458456 |
Primers |
TRINITY_DN11859_c2_g1_i29 |
Compound |
(AC)6tcg(CT)6 |
27 |
4460 |
4486 |
5 |
22552449 |
22556141 |
Primers |
TRINITY_DN12664_c1_g2_i4 |
Mononucleotide |
(T)12 |
12 |
2859 |
2870 |
7 |
15246633 |
15248015 |
Primers |
TRINITY_DN14601_c1_g2_i8 |
Mononucleotide |
(T)10 |
10 |
1043 |
1052 |
6 |
4712229 |
4711951 |
Primers |
TRINITY_DN14601_c1_g2_i8 |
Mononucleotide |
(A)13 |
13 |
3851 |
3863 |
6 |
4712229 |
4711951 |
Primers |
TRINITY_DN13156_c0_g2_i1 |
Mononucleotide |
(A)10 |
10 |
2000 |
2009 |
1 |
26556660 |
26554611 |
Primers |
TRINITY_DN13156_c0_g2_i1 |
Mononucleotide |
(A)10 |
10 |
3809 |
3818 |
1 |
26556660 |
26554611 |
Primers |
TRINITY_DN12913_c0_g2_i14 |
Mononucleotide |
(A)12 |
12 |
4139 |
4150 |
5 |
19757439 |
19759234 |
Primers |
TRINITY_DN13927_c3_g1_i2 |
Mononucleotide |
(T)10 |
10 |
1680 |
1689 |
3 |
5540511 |
5543567 |
Primers |
TRINITY_DN13927_c3_g1_i2 |
Mononucleotide |
(A)11 |
11 |
1859 |
1869 |
3 |
5540511 |
5543567 |
Primers |
TRINITY_DN11782_c1_g2_i1 |
Mononucleotide |
(A)10 |
10 |
1331 |
1340 |
5 |
23260990 |
23256505 |
Primers |
TRINITY_DN11782_c1_g2_i1 |
Trinucleotide |
(GAA)8 |
24 |
4467 |
4490 |
5 |
23260990 |
23256505 |
Primers |
TRINITY_DN11961_c1_g1_i16 |
Trinucleotide |
(GAA)8 |
24 |
4249 |
4272 |
3 |
4287525 |
4283630 |
Primers |
TRINITY_DN7770_c0_g1_i3 |
Trinucleotide |
(GTG)6 |
18 |
4425 |
4442 |
1 |
4613094 |
4608593 |
Primers |
TRINITY_DN10999_c2_g1_i4 |
Mononucleotide |
(T)10 |
10 |
320 |
329 |
7 |
3802437 |
3800424 |
Primers |
TRINITY_DN10999_c2_g1_i4 |
Mononucleotide |
(T)10 |
10 |
943 |
952 |
7 |
3802437 |
3800424 |
Primers |
TRINITY_DN14661_c5_g2_i5 |
Dinucleotide |
(GA)6 |
12 |
4435 |
4446 |
7 |
13696927 |
13698835 |
Primers |
TRINITY_DN12162_c0_g1_i2 |
Mononucleotide |
(A)10 |
10 |
167 |
176 |
5 |
26233519 |
26235056 |
Primers |
TRINITY_DN12394_c2_g1_i13 |
Mononucleotide |
(T)10 |
10 |
4042 |
4051 |
3 |
18523772 |
18519807 |
Primers |
TRINITY_DN13146_c5_g1_i9 |
Mononucleotide |
(A)15 |
15 |
66 |
80 |
1 |
17015593 |
17017033 |
Primers |
TRINITY_DN13146_c5_g1_i9 |
Compound |
(A)18(GAA)5 |
33 |
2750 |
2782 |
1 |
17015593 |
17017033 |
Primers |
TRINITY_DN13146_c5_g1_i9 |
Mononucleotide |
(A)12 |
12 |
3049 |
3060 |
1 |
17015593 |
17017033 |
Primers |
TRINITY_DN13146_c5_g1_i9 |
Mononucleotide |
(A)11 |
11 |
3616 |
3626 |
1 |
17015593 |
17017033 |
Primers |
TRINITY_DN13146_c5_g1_i9 |
Dinucleotide |
(GA)7 |
14 |
3758 |
3771 |
1 |
17015593 |
17017033 |
Primers |
TRINITY_DN13146_c5_g1_i9 |
Compound |
(CTT)6cccttcttttcgtgcccac(CT)11 |
59 |
3897 |
3955 |
1 |
17015593 |
17017033 |
Primers |
TRINITY_DN11216_c0_g3_i2 |
Dinucleotide |
(TC)10 |
20 |
250 |
269 |
5 |
5368783 |
5364784 |
Primers |
TRINITY_DN11216_c0_g3_i2 |
Tetranucleotide |
(TATG)6 |
24 |
1713 |
1736 |
5 |
5368783 |
5364784 |
Primers |
TRINITY_DN11216_c0_g3_i2 |
Dinucleotide |
(AT)14 |
28 |
2818 |
2845 |
5 |
5368783 |
5364784 |
Primers |
TRINITY_DN11216_c0_g3_i2 |
Dinucleotide |
(AG)6 |
12 |
4091 |
4102 |
5 |
5368783 |
5364784 |
Primers |
TRINITY_DN11216_c0_g3_i2 |
Mononucleotide |
(A)14 |
14 |
4462 |
4475 |
5 |
5368783 |
5364784 |
Primers |
TRINITY_DN13089_c0_g1_i6 |
Mononucleotide |
(T)13 |
13 |
752 |
764 |
7 |
9782182 |
9780825 |
Primers |
TRINITY_DN13089_c0_g1_i6 |
Trinucleotide |
(GGT)6 |
18 |
1993 |
2010 |
7 |
9782182 |
9780825 |
Primers |
TRINITY_DN13666_c0_g1_i10 |
Dinucleotide |
(CT)9 |
18 |
1255 |
1272 |
3 |
12425903 |
12428254 |
Primers |
TRINITY_DN12474_c4_g1_i3 |
Mononucleotide |
(T)18 |
18 |
174 |
191 |
5 |
14334224 |
14332195 |
Primers |
TRINITY_DN12474_c4_g1_i3 |
Tetranucleotide |
(AAAG)5 |
20 |
633 |
652 |
5 |
14334224 |
14332195 |
Primers |
TRINITY_DN12474_c4_g1_i3 |
Dinucleotide |
(GA)6 |
12 |
4292 |
4303 |
5 |
14334224 |
14332195 |
Primers |
TRINITY_DN12474_c4_g1_i3 |
Tetranucleotide |
(AATA)5 |
20 |
4410 |
4429 |
5 |
14334224 |
14332195 |
Primers |
TRINITY_DN11634_c0_g1_i1 |
Dinucleotide |
(AT)6 |
12 |
25 |
36 |
6 |
2476349 |
2478208 |
Primers |
TRINITY_DN11634_c0_g1_i1 |
Mononucleotide |
(T)18 |
18 |
897 |
914 |
6 |
2476349 |
2478208 |
Primers |
TRINITY_DN11634_c0_g1_i1 |
Mononucleotide |
(T)11 |
11 |
4006 |
4016 |
6 |
2476349 |
2478208 |
Primers |
TRINITY_DN13197_c0_g1_i3 |
Trinucleotide |
(AAT)6 |
18 |
42 |
59 |
3 |
31542273 |
31540346 |
Primers |
TRINITY_DN13197_c0_g1_i3 |
Trinucleotide |
(AAT)5 |
15 |
2715 |
2729 |
3 |
31542273 |
31540346 |
Primers |
TRINITY_DN13197_c0_g1_i3 |
Mononucleotide |
(A)11 |
11 |
4233 |
4243 |
3 |
31542273 |
31540346 |
Primers |
TRINITY_DN14472_c0_g1_i14 |
Trinucleotide |
(TTC)5 |
15 |
4451 |
4465 |
1 |
904664 |
902748 |
Primers |
TRINITY_DN11732_c3_g1_i2 |
Mononucleotide |
(T)15 |
15 |
4431 |
4445 |
4 |
23201691 |
23198397 |
Primers |
TRINITY_DN12430_c0_g1_i12 |
Mononucleotide |
(T)14 |
14 |
2947 |
2960 |
3 |
3167558 |
3164655 |
Primers |
TRINITY_DN11484_c2_g1_i8 |
Dinucleotide |
(TC)12 |
24 |
292 |
315 |
1 |
8987839 |
8991835 |
Primers |
TRINITY_DN14067_c2_g4_i2 |
Mononucleotide |
(A)26 |
26 |
6 |
31 |
5 |
26636410 |
26633785 |
Primers |
TRINITY_DN14582_c1_g2_i6 |
Mononucleotide |
(T)10 |
10 |
361 |
370 |
Scaffold000113 |
163869 |
160913 |
Primers |
TRINITY_DN14582_c1_g2_i6 |
Mononucleotide |
(T)11 |
11 |
3842 |
3852 |
Scaffold000113 |
163869 |
160913 |
Primers |
TRINITY_DN11759_c2_g1_i3 |
Mononucleotide |
(T)10 |
10 |
219 |
228 |
2 |
14083568 |
14085778 |
Primers |
TRINITY_DN11759_c2_g1_i3 |
Mononucleotide |
(A)10 |
10 |
1218 |
1227 |
2 |
14083568 |
14085778 |
Primers |
TRINITY_DN11759_c2_g1_i3 |
Mononucleotide |
(T)10 |
10 |
2607 |
2616 |
2 |
14083568 |
14085778 |
Primers |
TRINITY_DN11759_c2_g1_i3 |
Compound |
(AAC)5caaatgaaacaggtaccgtaaaatttaa(AC)7 |
57 |
3954 |
4010 |
2 |
14083568 |
14085778 |
Primers |
TRINITY_DN11569_c4_g1_i31 |
Trinucleotide |
(CTT)5 |
15 |
376 |
390 |
7 |
2837130 |
2841617 |
Primers |
TRINITY_DN11569_c4_g1_i31 |
Mononucleotide |
(A)13 |
13 |
4209 |
4221 |
7 |
2837130 |
2841617 |
Primers |
TRINITY_DN13230_c2_g2_i1 |
Trinucleotide |
(ATA)7 |
21 |
3808 |
3828 |
2 |
18308395 |
18306962 |
Primers |
TRINITY_DN13230_c2_g2_i1 |
Mononucleotide |
(A)10 |
10 |
4145 |
4154 |
2 |
18308395 |
18306962 |
Primers |
TRINITY_DN11667_c0_g1_i13 |
Compound |
(CT)12aaaaataaaaatgaggaaaacaaaaagacatctctttctgttgtttcaaaaataaataataaataaact(A)12 |
105 |
965 |
1069 |
3 |
27164115 |
27161523 |
Primers |
TRINITY_DN13325_c0_g7_i1 |
Mononucleotide |
(A)21 |
21 |
53 |
73 |
6 |
19822991 |
19818520 |
Primers |
TRINITY_DN14075_c5_g2_i14 |
Mononucleotide |
(A)16 |
16 |
4241 |
4256 |
6 |
17101933 |
17099500 |
Primers |
TRINITY_DN13168_c0_g4_i11 |
Mononucleotide |
(T)13 |
13 |
862 |
874 |
4 |
20315439 |
20313721 |
Primers |
TRINITY_DN13433_c0_g7_i2 |
Trinucleotide |
(AGG)8 |
24 |
4153 |
4176 |
6 |
13061171 |
13064846 |
Primers |
TRINITY_DN9989_c0_g1_i1 |
Mononucleotide |
(T)11 |
11 |
833 |
843 |
3 |
30389885 |
30385410 |
Primers |
TRINITY_DN9989_c0_g1_i1 |
Trinucleotide |
(GCA)5 |
15 |
3783 |
3797 |
3 |
30389885 |
30385410 |
Primers |
TRINITY_DN13903_c3_g1_i8 |
Compound |
(TC)13tttctctcgctaaagtttagtggaagaatctcctgcgcagttttcatcgccttttcttttaaagcatgattagcactgttcaatttctagttctttc(T)10 |
133 |
543 |
675 |
3 |
36018507 |
36021911 |
Primers |
TRINITY_DN12659_c4_g2_i7 |
Dinucleotide |
(AT)6 |
12 |
365 |
376 |
2 |
19547597 |
19551388 |
Primers |
TRINITY_DN12187_c1_g2_i2 |
Mononucleotide |
(T)10 |
10 |
818 |
827 |
7 |
3644299 |
3642004 |
Primers |
TRINITY_DN12187_c1_g2_i2 |
Compound |
(T)11ctttcagacatcgggatgattacagagataaggattataggagg(AGAAGC)5 |
85 |
2034 |
2118 |
7 |
3644299 |
3642004 |
Primers |
TRINITY_DN12187_c1_g2_i2 |
Compound |
(TA)6tgttatattctacatagtccattctatggagaccaggacgaagagattc(TA)6 |
73 |
4049 |
4121 |
7 |
3644299 |
3642004 |
Primers |
TRINITY_DN13962_c1_g1_i33 |
Mononucleotide |
(T)12 |
12 |
3923 |
3934 |
3 |
31618541 |
31617466 |
Primers |
TRINITY_DN13962_c1_g1_i33 |
Mononucleotide |
(A)12 |
12 |
4339 |
4350 |
3 |
31618541 |
31617466 |
Primers |
TRINITY_DN11267_c1_g1_i3 |
Dinucleotide |
(AT)10 |
20 |
3655 |
3674 |
3 |
26367990 |
26372461 |
Primers |
TRINITY_DN11267_c1_g1_i3 |
Compound |
(C)10ac(A)14 |
26 |
4064 |
4089 |
3 |
26367990 |
26372461 |
Primers |
TRINITY_DN11800_c0_g7_i2 |
Mononucleotide |
(T)31 |
31 |
4000 |
4030 |
4 |
16783131 |
16778659 |
Primers |
TRINITY_DN12831_c1_g1_i11 |
Mononucleotide |
(A)15 |
15 |
4208 |
4222 |
3 |
3550924 |
3552884 |
Primers |
TRINITY_DN13879_c2_g1_i3 |
Dinucleotide |
(GT)9 |
18 |
17 |
34 |
5 |
23353727 |
23352346 |
Primers |
TRINITY_DN13879_c2_g1_i3 |
Trinucleotide |
(AGA)9 |
27 |
4204 |
4230 |
5 |
23353727 |
23352346 |
Primers |
TRINITY_DN10622_c0_g1_i2 |
Mononucleotide |
(T)10 |
10 |
549 |
558 |
3 |
6986980 |
6984568 |
Primers |
TRINITY_DN12362_c0_g3_i11 |
Trinucleotide |
(TTC)6 |
18 |
663 |
680 |
7 |
15841055 |
15843530 |
Primers |
TRINITY_DN12362_c0_g3_i11 |
Mononucleotide |
(T)13 |
13 |
2650 |
2662 |
7 |
15841055 |
15843530 |
Primers |
TRINITY_DN11103_c0_g2_i2 |
Dinucleotide |
(AG)12 |
24 |
2777 |
2800 |
1 |
13292739 |
13295537 |
Primers |
TRINITY_DN13522_c0_g3_i3 |
Dinucleotide |
(GA)6 |
12 |
3995 |
4006 |
3 |
306537 |
308213 |
Primers |
TRINITY_DN13522_c0_g3_i3 |
Compound |
(A)12c(A)11 |
24 |
4273 |
4296 |
3 |
306537 |
308213 |
Primers |
TRINITY_DN9861_c0_g1_i3 |
Trinucleotide |
(AGA)5 |
15 |
3960 |
3974 |
5 |
7429747 |
7432515 |
Primers |
TRINITY_DN14662_c5_g3_i4 |
Trinucleotide |
(CAC)5 |
15 |
3417 |
3431 |
4 |
15802422 |
15805172 |
Primers |
TRINITY_DN14662_c5_g3_i4 |
Mononucleotide |
(A)18 |
18 |
4236 |
4253 |
4 |
15802422 |
15805172 |
Primers |
TRINITY_DN11212_c0_g1_i25 |
Dinucleotide |
(GA)7 |
14 |
3821 |
3834 |
6 |
27081676 |
27077735 |
Primers |
TRINITY_DN12147_c1_g1_i10 |
Mononucleotide |
(A)10 |
10 |
911 |
920 |
2 |
2978741 |
2976890 |
Primers |
TRINITY_DN14208_c0_g4_i5 |
Dinucleotide |
(AG)10 |
20 |
4192 |
4211 |
3 |
22821980 |
22824248 |
Primers |
TRINITY_DN9952_c0_g1_i1 |
Mononucleotide |
(A)10 |
10 |
3479 |
3488 |
2 |
16245324 |
16242862 |
Primers |
TRINITY_DN9952_c0_g1_i1 |
Mononucleotide |
(A)17 |
17 |
3954 |
3970 |
2 |
16245324 |
16242862 |
Primers |
TRINITY_DN9952_c0_g1_i1 |
Mononucleotide |
(A)10 |
10 |
4201 |
4210 |
2 |
16245324 |
16242862 |
Primers |
TRINITY_DN14179_c1_g2_i13 |
Mononucleotide |
(T)12 |
12 |
1932 |
1943 |
6 |
831682 |
830237 |
Primers |
TRINITY_DN12210_c0_g2_i5 |
Mononucleotide |
(A)10 |
10 |
13 |
22 |
1 |
21476939 |
21481405 |
Primers |
TRINITY_DN12210_c0_g2_i5 |
Dinucleotide |
(TA)6 |
12 |
1311 |
1322 |
1 |
21476939 |
21481405 |
Primers |
TRINITY_DN12210_c0_g2_i5 |
Mononucleotide |
(A)10 |
10 |
3790 |
3799 |
1 |
21476939 |
21481405 |
Primers |
TRINITY_DN12210_c0_g2_i5 |
Mononucleotide |
(A)20 |
20 |
4209 |
4228 |
1 |
21476939 |
21481405 |
Primers |
TRINITY_DN14110_c3_g2_i13 |
Hexanucleotide |
(TGGAAT)7 |
42 |
4311 |
4352 |
1 |
24652778 |
24654616 |
Primers |
TRINITY_DN11557_c0_g4_i12 |
Trinucleotide |
(ATT)6 |
18 |
3058 |
3075 |
7 |
14228500 |
14230234 |
Primers |
TRINITY_DN11557_c0_g4_i12 |
Compound |
(T)21agttttccctttttggaaattaatagtaattttctacttaattatagaaattaaattg(A)13 |
92 |
3472 |
3563 |
7 |
14228500 |
14230234 |
Primers |
TRINITY_DN11557_c0_g4_i12 |
Mononucleotide |
(A)10 |
10 |
3973 |
3982 |
7 |
14228500 |
14230234 |
Primers |
TRINITY_DN11557_c0_g4_i12 |
Mononucleotide |
(A)13 |
13 |
4442 |
4454 |
7 |
14228500 |
14230234 |
Primers |
TRINITY_DN12482_c0_g2_i4 |
Mononucleotide |
(A)17 |
17 |
1819 |
1835 |
5 |
7081320 |
7085779 |
Primers |
TRINITY_DN12482_c0_g2_i4 |
Mononucleotide |
(A)14 |
14 |
4231 |
4244 |
5 |
7081320 |
7085779 |
Primers |
TRINITY_DN12870_c5_g1_i5 |
Mononucleotide |
(A)10 |
10 |
767 |
776 |
2 |
9206019 |
9208585 |
Primers |
TRINITY_DN12870_c5_g1_i5 |
Compound |
(TC)7gtcaaagaaaaaacagcacgaaatgt(AG)7attataggaagcagaagaaatatagagagaaaaaaggaaagg(GAA)6 |
114 |
4328 |
4441 |
2 |
9206019 |
9208585 |
Primers |
TRINITY_DN14545_c0_g3_i4 |
Compound |
(AG)6g(GA)7 |
27 |
4341 |
4367 |
2 |
1894052 |
1896985 |
Primers |
TRINITY_DN14283_c2_g7_i8 |
Mononucleotide |
(T)15 |
15 |
2807 |
2821 |
3 |
12735563 |
12731109 |
Primers |
TRINITY_DN14283_c2_g7_i8 |
Compound |
(T)12gctataataaagttttattttatgaaggttagaattgtagatttcgtttgaagttgatc(TA)9 |
89 |
3828 |
3916 |
3 |
12735563 |
12731109 |
Primers |
TRINITY_DN14356_c0_g1_i2 |
Trinucleotide |
(TCT)6 |
18 |
1682 |
1699 |
6 |
23051509 |
23053735 |
Primers |
TRINITY_DN14356_c0_g1_i2 |
Mononucleotide |
(A)10 |
10 |
3940 |
3949 |
6 |
23051509 |
23053735 |
Primers |
TRINITY_DN12814_c0_g1_i8 |
Compound |
(AG)8aaggagttagagaaatgggaatggttgaattgaattgaggat(AG)6 |
70 |
4370 |
4439 |
2 |
12609321 |
12610371 |
Primers |
TRINITY_DN12061_c0_g1_i23 |
Dinucleotide |
(GA)6 |
12 |
2222 |
2233 |
6 |
21969783 |
21970760 |
Primers |
TRINITY_DN12748_c3_g2_i9 |
Mononucleotide |
(T)29 |
29 |
328 |
356 |
7 |
5191862 |
5189008 |
Primers |
TRINITY_DN12748_c3_g2_i9 |
Trinucleotide |
(GCT)5 |
15 |
499 |
513 |
7 |
5191862 |
5189008 |
Primers |
TRINITY_DN12748_c3_g2_i9 |
Mononucleotide |
(T)12 |
12 |
2395 |
2406 |
7 |
5191862 |
5189008 |
Primers |
TRINITY_DN12341_c3_g5_i4 |
Mononucleotide |
(A)12 |
12 |
2820 |
2831 |
6 |
6204414 |
6202967 |
Primers |
TRINITY_DN13474_c2_g2_i17 |
Trinucleotide |
(TCT)6 |
18 |
330 |
347 |
6 |
25091021 |
25094764 |
Primers |
TRINITY_DN14076_c4_g1_i6 |
Mononucleotide |
(A)11 |
11 |
133 |
143 |
1 |
3264181 |
3267136 |
Primers |
TRINITY_DN14076_c4_g1_i6 |
Mononucleotide |
(T)13 |
13 |
367 |
379 |
1 |
3264181 |
3267136 |
Primers |
TRINITY_DN11796_c0_g8_i2 |
Mononucleotide |
(T)10 |
10 |
44 |
53 |
1 |
22876659 |
22879964 |
Primers |
TRINITY_DN13633_c1_g1_i25 |
Mononucleotide |
(T)11 |
11 |
661 |
671 |
1 |
17529842 |
17531179 |
Primers |
TRINITY_DN13633_c1_g1_i25 |
Compound |
(AG)7aaatgagggaggtgtgag(GAA)6 |
50 |
4402 |
4451 |
1 |
17529842 |
17531179 |
Primers |
TRINITY_DN13895_c0_g1_i1 |
Dinucleotide |
(TG)8 |
16 |
152 |
167 |
3 |
10659574 |
10655139 |
Primers |
TRINITY_DN11470_c1_g4_i5 |
Mononucleotide |
(A)12 |
12 |
198 |
209 |
1 |
23356048 |
23359661 |
Primers |
TRINITY_DN11470_c1_g4_i5 |
Mononucleotide |
(A)10 |
10 |
3932 |
3941 |
1 |
23356048 |
23359661 |
Primers |
TRINITY_DN11470_c1_g4_i5 |
Trinucleotide |
(TGA)7 |
21 |
4406 |
4426 |
1 |
23356048 |
23359661 |
Primers |
TRINITY_DN13486_c4_g5_i1 |
Trinucleotide |
(ATG)8 |
24 |
202 |
225 |
3 |
8648543 |
8644095 |
Primers |
TRINITY_DN13486_c4_g5_i1 |
Mononucleotide |
(T)16 |
16 |
482 |
497 |
3 |
8648543 |
8644095 |
Primers |
TRINITY_DN13486_c4_g5_i1 |
Trinucleotide |
(AGG)5 |
15 |
772 |
786 |
3 |
8648543 |
8644095 |
Primers |
TRINITY_DN13486_c4_g5_i1 |
Mononucleotide |
(T)10 |
10 |
961 |
970 |
3 |
8648543 |
8644095 |
Primers |
TRINITY_DN13490_c1_g2_i9 |
Mononucleotide |
(A)15 |
15 |
4113 |
4127 |
2 |
9691100 |
9688786 |
Primers |
TRINITY_DN13500_c0_g1_i6 |
Dinucleotide |
(TA)6 |
12 |
170 |
181 |
2 |
2959046 |
2957200 |
Primers |
TRINITY_DN11508_c1_g1_i3 |
Compound |
(TA)6gttggcaaaaaatatgaatctacataacaaaaatcaaagatacaaattacaatgaagaaaga(AAG)7 |
95 |
84 |
178 |
3 |
34279334 |
34274889 |
Primers |
TRINITY_DN11508_c1_g1_i3 |
Mononucleotide |
(A)11 |
11 |
1678 |
1688 |
3 |
34279334 |
34274889 |
Primers |
TRINITY_DN10460_c1_g1_i2 |
Mononucleotide |
(T)10 |
10 |
1518 |
1527 |
3 |
1793890 |
1798306 |
Primers |
TRINITY_DN10460_c1_g1_i2 |
Mononucleotide |
(A)10 |
10 |
4013 |
4022 |
3 |
1793890 |
1798306 |
Primers |
TRINITY_DN13954_c0_g2_i4 |
Dinucleotide |
(AG)7 |
14 |
177 |
190 |
6 |
19075639 |
19072813 |
Primers |
TRINITY_DN13981_c2_g1_i9 |
Trinucleotide |
(ATG)5 |
15 |
322 |
336 |
4 |
14611057 |
14608290 |
Primers |
TRINITY_DN13981_c2_g1_i9 |
Mononucleotide |
(A)11 |
11 |
4210 |
4220 |
4 |
14611057 |
14608290 |
Primers |
TRINITY_DN14481_c0_g1_i13 |
Dinucleotide |
(CA)7 |
14 |
57 |
70 |
6 |
5806837 |
5805975 |
Primers |
TRINITY_DN13286_c1_g7_i2 |
Compound |
(A)11gaaaaaaggaaaa(AAG)5 |
39 |
507 |
545 |
2 |
8053341 |
8050012 |
Primers |
TRINITY_DN13286_c1_g7_i2 |
Trinucleotide |
(GAG)7 |
21 |
872 |
892 |
2 |
8053341 |
8050012 |
Primers |
TRINITY_DN13286_c1_g7_i2 |
Mononucleotide |
(T)16 |
16 |
2829 |
2844 |
2 |
8053341 |
8050012 |
Primers |
TRINITY_DN13286_c1_g7_i2 |
Mononucleotide |
(A)10 |
10 |
4118 |
4127 |
2 |
8053341 |
8050012 |
Primers |
TRINITY_DN12800_c1_g1_i1 |
Trinucleotide |
(TTC)6 |
18 |
30 |
47 |
7 |
15147790 |
15149790 |
Primers |
TRINITY_DN12800_c1_g1_i1 |
Mononucleotide |
(T)11 |
11 |
2892 |
2902 |
7 |
15147790 |
15149790 |
Primers |
TRINITY_DN13622_c3_g1_i4 |
Mononucleotide |
(T)10 |
10 |
121 |
130 |
1 |
18437760 |
18441600 |
Primers |
TRINITY_DN13622_c3_g1_i4 |
Mononucleotide |
(A)13 |
13 |
893 |
905 |
1 |
18437760 |
18441600 |
Primers |
TRINITY_DN13622_c3_g1_i4 |
Mononucleotide |
(A)12 |
12 |
1464 |
1475 |
1 |
18437760 |
18441600 |
Primers |
TRINITY_DN13622_c3_g1_i4 |
Mononucleotide |
(T)10 |
10 |
3171 |
3180 |
1 |
18437760 |
18441600 |
Primers |
TRINITY_DN13622_c3_g1_i4 |
Mononucleotide |
(A)11 |
11 |
3678 |
3688 |
1 |
18437760 |
18441600 |
Primers |
TRINITY_DN13622_c3_g1_i4 |
Compound |
(T)10ctttttttttccctcaatgaaaaacaattgtttctatcaaataac(AAT)5 |
70 |
4298 |
4367 |
1 |
18437760 |
18441600 |
Primers |
TRINITY_DN12767_c3_g1_i5 |
Mononucleotide |
(G)13 |
13 |
196 |
208 |
6 |
4835342 |
4830918 |
Primers |
TRINITY_DN12767_c3_g1_i5 |
Trinucleotide |
(AAT)5 |
15 |
772 |
786 |
6 |
4835342 |
4830918 |
Primers |
TRINITY_DN12783_c0_g1_i16 |
Trinucleotide |
(GAA)6 |
18 |
4292 |
4309 |
7 |
13451471 |
13450139 |
Primers |
TRINITY_DN12333_c0_g1_i4 |
Trinucleotide |
(TTC)7 |
21 |
56 |
76 |
5 |
1074379 |
1077275 |
Primers |
TRINITY_DN12333_c0_g1_i4 |
Compound |
(T)11gttttcgttttccttttacatttgttgttaggtttgtttatgttttatttgccctctctaaccttcacagtctcggcattagatc(A)12 |
108 |
3977 |
4084 |
5 |
1074379 |
1077275 |
Primers |
TRINITY_DN12388_c1_g2_i5 |
Mononucleotide |
(T)12 |
12 |
700 |
711 |
7 |
18186598 |
18191030 |
Primers |
TRINITY_DN12388_c1_g2_i5 |
Mononucleotide |
(T)12 |
12 |
1202 |
1213 |
7 |
18186598 |
18191030 |
Primers |
TRINITY_DN14350_c1_g2_i5 |
Mononucleotide |
(T)11 |
11 |
4319 |
4329 |
1 |
11158899 |
11160454 |
Primers |
TRINITY_DN11505_c4_g4_i3 |
Dinucleotide |
(TA)6 |
12 |
38 |
49 |
5 |
880389 |
881896 |
Primers |
TRINITY_DN11546_c0_g2_i3 |
Trinucleotide |
(TTC)8 |
24 |
288 |
311 |
3 |
10523416 |
10526400 |
Primers |
TRINITY_DN9941_c0_g1_i1 |
Mononucleotide |
(T)13 |
13 |
172 |
184 |
2 |
2081924 |
2077530 |
Primers |
TRINITY_DN12898_c7_g1_i11 |
Trinucleotide |
(CTC)7 |
21 |
127 |
147 |
6 |
17967661 |
17965381 |
Primers |
TRINITY_DN12898_c7_g1_i11 |
Dinucleotide |
(TC)9 |
18 |
291 |
308 |
6 |
17967661 |
17965381 |
Primers |
TRINITY_DN12898_c7_g1_i11 |
Mononucleotide |
(T)10 |
10 |
2791 |
2800 |
6 |
17967661 |
17965381 |
Primers |
TRINITY_DN13313_c4_g4_i2 |
Dinucleotide |
(TC)8 |
16 |
119 |
134 |
7 |
13827499 |
13826067 |
Primers |
TRINITY_DN13313_c4_g4_i2 |
Mononucleotide |
(A)10 |
10 |
3722 |
3731 |
7 |
13827499 |
13826067 |
Primers |
TRINITY_DN12805_c0_g3_i3 |
Mononucleotide |
(A)25 |
25 |
1 |
25 |
7 |
4329702 |
4334127 |
Primers |
TRINITY_DN12805_c0_g3_i3 |
Mononucleotide |
(T)13 |
13 |
4416 |
4428 |
7 |
4329702 |
4334127 |
Primers |
TRINITY_DN13978_c0_g2_i9 |
Mononucleotide |
(A)10 |
10 |
4400 |
4409 |
7 |
16515412 |
16518375 |
Primers |
TRINITY_DN11508_c4_g2_i5 |
Trinucleotide |
(TTC)6 |
18 |
672 |
689 |
3 |
28102144 |
28104489 |
Primers |
TRINITY_DN11508_c4_g2_i5 |
Mononucleotide |
(A)12 |
12 |
1253 |
1264 |
3 |
28102144 |
28104489 |
Primers |
TRINITY_DN11508_c4_g2_i5 |
Mononucleotide |
(T)22 |
22 |
1381 |
1402 |
3 |
28102144 |
28104489 |
Primers |
TRINITY_DN14249_c0_g3_i12 |
Mononucleotide |
(A)30 |
30 |
3927 |
3956 |
4 |
5528228 |
5523799 |
Primers |
TRINITY_DN12832_c2_g1_i12 |
Mononucleotide |
(T)10 |
10 |
4017 |
4026 |
3 |
34545292 |
34546895 |
Primers |
TRINITY_DN12832_c2_g1_i12 |
Mononucleotide |
(T)16 |
16 |
4276 |
4291 |
3 |
34545292 |
34546895 |
Primers |
TRINITY_DN13364_c2_g1_i3 |
Mononucleotide |
(A)13 |
13 |
234 |
246 |
5 |
22496205 |
22493739 |
Primers |
TRINITY_DN13364_c2_g1_i3 |
Mononucleotide |
(A)10 |
10 |
1110 |
1119 |
5 |
22496205 |
22493739 |
Primers |
TRINITY_DN13364_c2_g1_i3 |
Mononucleotide |
(T)10 |
10 |
3606 |
3615 |
5 |
22496205 |
22493739 |
Primers |
TRINITY_DN14543_c3_g1_i7 |
Dinucleotide |
(AT)6 |
12 |
129 |
140 |
6 |
5000376 |
4998420 |
Primers |
TRINITY_DN14543_c3_g1_i7 |
Mononucleotide |
(A)14 |
14 |
1607 |
1620 |
6 |
5000376 |
4998420 |
Primers |
TRINITY_DN14543_c3_g1_i7 |
Mononucleotide |
(A)10 |
10 |
2613 |
2622 |
6 |
5000376 |
4998420 |
Primers |
TRINITY_DN14543_c3_g1_i7 |
Trinucleotide |
(AAT)5 |
15 |
2876 |
2890 |
6 |
5000376 |
4998420 |
Primers |
TRINITY_DN14543_c3_g1_i7 |
Dinucleotide |
(CA)10 |
20 |
3154 |
3173 |
6 |
5000376 |
4998420 |
Primers |
TRINITY_DN14543_c3_g1_i7 |
Mononucleotide |
(A)10 |
10 |
3769 |
3778 |
6 |
5000376 |
4998420 |
Primers |
TRINITY_DN14543_c3_g1_i7 |
Compound |
(CT)11agaagagagactggcgactggagtaggctttgaatgtgatcgcggatttgggaattggaagcgaagaaatgaagtggccgat(TTC)5 |
119 |
4229 |
4347 |
6 |
5000376 |
4998420 |
Primers |
TRINITY_DN14255_c0_g3_i2 |
Mononucleotide |
(A)15 |
15 |
1458 |
1472 |
2 |
16033356 |
16030126 |
Primers |
TRINITY_DN13446_c0_g2_i3 |
Dinucleotide |
(AT)7 |
14 |
4379 |
4392 |
2 |
18427867 |
18432291 |
Primers |
TRINITY_DN13391_c3_g4_i5 |
Mononucleotide |
(A)12 |
12 |
3529 |
3540 |
5 |
13318436 |
13315576 |
Primers |
TRINITY_DN13041_c2_g2_i3 |
Dinucleotide |
(TA)6 |
12 |
861 |
872 |
7 |
17295348 |
17299770 |
Primers |
TRINITY_DN13041_c2_g2_i3 |
Mononucleotide |
(A)12 |
12 |
1138 |
1149 |
7 |
17295348 |
17299770 |
Primers |
TRINITY_DN13041_c2_g2_i3 |
Mononucleotide |
(A)15 |
15 |
3912 |
3926 |
7 |
17295348 |
17299770 |
Primers |
TRINITY_DN12045_c0_g1_i8 |
Mononucleotide |
(T)12 |
12 |
2753 |
2764 |
1 |
1938283 |
1936323 |
Primers |
TRINITY_DN13337_c2_g2_i14 |
Mononucleotide |
(A)11 |
11 |
121 |
131 |
3 |
6356346 |
6360715 |
Primers |
TRINITY_DN14272_c1_g2_i3 |
Trinucleotide |
(GAG)5 |
15 |
354 |
368 |
5 |
5055181 |
5052070 |
Primers |
TRINITY_DN11347_c0_g5_i6 |
Mononucleotide |
(T)10 |
10 |
1 |
10 |
1 |
22898971 |
22902503 |
Primers |
TRINITY_DN11347_c0_g5_i6 |
Compound |
(CT)9(CA)10 |
38 |
1296 |
1333 |
1 |
22898971 |
22902503 |
Primers |
TRINITY_DN11347_c0_g5_i6 |
Mononucleotide |
(T)11 |
11 |
4120 |
4130 |
1 |
22898971 |
22902503 |
Primers |
TRINITY_DN11589_c0_g6_i2 |
Trinucleotide |
(GAA)15 |
45 |
4370 |
4414 |
5 |
16287960 |
16292366 |
Primers |
TRINITY_DN11414_c0_g3_i4 |
Compound |
(A)10tcagttttgtaactcgtaggtaataaccatcattaaatttggacctgattcaaacctaatttaaaaattctcactataatcatcaaatgttgggt(A)10 |
115 |
28 |
142 |
4 |
9404695 |
9403368 |
Primers |
TRINITY_DN11414_c0_g3_i4 |
Mononucleotide |
(T)10 |
10 |
602 |
611 |
4 |
9404695 |
9403368 |
Primers |
TRINITY_DN11414_c0_g3_i4 |
Trinucleotide |
(GCA)5 |
15 |
782 |
796 |
4 |
9404695 |
9403368 |
Primers |
TRINITY_DN13113_c2_g1_i2 |
Mononucleotide |
(A)11 |
11 |
3003 |
3013 |
1 |
1734955 |
1735999 |
Primers |
TRINITY_DN13854_c0_g8_i1 |
Compound |
(TA)6aacacatctatatataacatttatataatat(TA)8(GA)8 |
75 |
4297 |
4371 |
3 |
10204717 |
10208065 |
Primers |
TRINITY_DN7660_c0_g1_i4 |
Mononucleotide |
(A)10 |
10 |
4092 |
4101 |
5 |
24599785 |
24596624 |
Primers |
TRINITY_DN11832_c0_g2_i12 |
Mononucleotide |
(A)19 |
19 |
9 |
27 |
2 |
118746 |
116339 |
Primers |
TRINITY_DN14030_c1_g1_i5 |
Dinucleotide |
(GA)6 |
12 |
968 |
979 |
4 |
5858513 |
5856535 |
Primers |
TRINITY_DN14030_c1_g1_i5 |
Compound |
(TTA)5gatggctgtccatagtc(CA)6 |
44 |
1382 |
1425 |
4 |
5858513 |
5856535 |
Primers |
TRINITY_DN12358_c0_g2_i6 |
Dinucleotide |
(TC)10 |
20 |
1502 |
1521 |
3 |
34085688 |
34087506 |
Primers |
TRINITY_DN13497_c0_g6_i3 |
Trinucleotide |
(AAG)9 |
27 |
3948 |
3974 |
1 |
2365638 |
2367128 |
Primers |
TRINITY_DN13497_c0_g6_i3 |
Hexanucleotide |
(GGAAGA)5 |
30 |
4304 |
4333 |
1 |
2365638 |
2367128 |
Primers |
TRINITY_DN14011_c0_g1_i6 |
Mononucleotide |
(A)12 |
12 |
3774 |
3785 |
1 |
20329553 |
20331248 |
Primers |
TRINITY_DN14011_c0_g1_i6 |
Mononucleotide |
(A)11 |
11 |
4081 |
4091 |
1 |
20329553 |
20331248 |
Primers |
TRINITY_DN14383_c3_g1_i41 |
Pentanucleotide |
(AAGAA)5 |
25 |
73 |
97 |
2 |
13181325 |
13184092 |
Primers |
TRINITY_DN14383_c3_g1_i41 |
Mononucleotide |
(A)12 |
12 |
4167 |
4178 |
2 |
13181325 |
13184092 |
Primers |
TRINITY_DN10662_c0_g1_i3 |
Dinucleotide |
(TA)7 |
14 |
3537 |
3550 |
3 |
2085272 |
2087166 |
Primers |
TRINITY_DN6630_c0_g1_i1 |
Mononucleotide |
(T)10 |
10 |
1989 |
1998 |
2 |
11069950 |
11074356 |
Primers |
TRINITY_DN6630_c0_g1_i1 |
Mononucleotide |
(T)11 |
11 |
2549 |
2559 |
2 |
11069950 |
11074356 |
Primers |
TRINITY_DN6630_c0_g1_i1 |
Mononucleotide |
(A)11 |
11 |
3261 |
3271 |
2 |
11069950 |
11074356 |
Primers |
TRINITY_DN12270_c5_g3_i2 |
Dinucleotide |
(TC)9 |
18 |
3478 |
3495 |
1 |
28872688 |
28875247 |
Primers |
TRINITY_DN12800_c2_g2_i7 |
Trinucleotide |
(CTT)8 |
24 |
2823 |
2846 |
1 |
18715649 |
18714068 |
Primers |
TRINITY_DN12800_c2_g2_i7 |
Dinucleotide |
(AG)6 |
12 |
3875 |
3886 |
1 |
18715649 |
18714068 |
Primers |
TRINITY_DN13561_c1_g1_i5 |
Mononucleotide |
(T)16 |
16 |
477 |
492 |
4 |
8659360 |
8657229 |
Primers |
TRINITY_DN12409_c2_g2_i1 |
Mononucleotide |
(A)21 |
21 |
822 |
842 |
1 |
13323542 |
13321665 |
Primers |
TRINITY_DN12409_c2_g2_i1 |
Mononucleotide |
(A)10 |
10 |
2542 |
2551 |
1 |
13323542 |
13321665 |
Primers |
TRINITY_DN12409_c2_g2_i1 |
Mononucleotide |
(T)16 |
16 |
2682 |
2697 |
1 |
13323542 |
13321665 |
Primers |
TRINITY_DN12409_c2_g2_i1 |
Dinucleotide |
(TC)6 |
12 |
4227 |
4238 |
1 |
13323542 |
13321665 |
Primers |
TRINITY_DN12685_c0_g1_i13 |
Trinucleotide |
(TTC)5 |
15 |
141 |
155 |
4 |
1381118 |
1379555 |
Primers |
TRINITY_DN12685_c0_g1_i13 |
Compound* |
(A)17(AG)9* |
34 |
1365 |
1398 |
4 |
1381118 |
1379555 |
Primers |
TRINITY_DN13451_c0_g5_i1 |
Trinucleotide |
(CTT)7 |
21 |
174 |
194 |
3 |
12507380 |
12511799 |
Primers |
TRINITY_DN12054_c0_g2_i11 |
Mononucleotide |
(T)10 |
10 |
94 |
103 |
7 |
5952680 |
5953901 |
Primers |
TRINITY_DN12054_c0_g2_i11 |
Mononucleotide |
(A)10 |
10 |
1427 |
1436 |
7 |
5952680 |
5953901 |
Primers |
TRINITY_DN12650_c0_g1_i22 |
Mononucleotide |
(A)16 |
16 |
4363 |
4378 |
5 |
11470023 |
11472802 |
Primers |
TRINITY_DN11557_c0_g5_i8 |
Mononucleotide |
(T)10 |
10 |
2420 |
2429 |
2 |
6065668 |
6068622 |
Primers |
TRINITY_DN12263_c0_g1_i13 |
Trinucleotide |
(TCT)6 |
18 |
4277 |
4294 |
6 |
18427787 |
18428711 |
Primers |
TRINITY_DN13423_c2_g2_i3 |
Mononucleotide |
(A)11 |
11 |
204 |
214 |
5 |
21464849 |
21466692 |
Primers |
TRINITY_DN11036_c0_g1_i8 |
Trinucleotide |
(TTC)10 |
30 |
99 |
128 |
6 |
20449597 |
20452135 |
Primers |
TRINITY_DN11036_c0_g1_i8 |
Mononucleotide |
(T)13 |
13 |
3784 |
3796 |
6 |
20449597 |
20452135 |
Primers |
TRINITY_DN11036_c0_g1_i8 |
Mononucleotide |
(A)11 |
11 |
4013 |
4023 |
6 |
20449597 |
20452135 |
Primers |
TRINITY_DN12023_c1_g3_i5 |
Mononucleotide |
(T)12 |
12 |
223 |
234 |
3 |
32949935 |
32946472 |
Primers |
TRINITY_DN12023_c1_g3_i5 |
Mononucleotide |
(A)18 |
18 |
1318 |
1335 |
3 |
32949935 |
32946472 |
Primers |
TRINITY_DN12023_c1_g3_i5 |
Trinucleotide |
(AAT)7 |
21 |
3510 |
3530 |
3 |
32949935 |
32946472 |
Primers |
TRINITY_DN12023_c1_g3_i5 |
Trinucleotide |
(GAT)5 |
15 |
4338 |
4352 |
3 |
32949935 |
32946472 |
Primers |
TRINITY_DN11764_c0_g3_i6 |
Trinucleotide |
(TCT)8 |
24 |
595 |
618 |
1 |
982466 |
979651 |
Primers |
TRINITY_DN11764_c0_g3_i6 |
Mononucleotide |
(A)11 |
11 |
3358 |
3368 |
1 |
982466 |
979651 |
Primers |
TRINITY_DN14569_c1_g2_i2 |
Trinucleotide |
(CAC)10 |
30 |
53 |
82 |
1 |
25517640 |
25519789 |
Primers |
TRINITY_DN11576_c3_g3_i3 |
Mononucleotide |
(T)10 |
10 |
467 |
476 |
4 |
125791 |
130166 |
Primers |
TRINITY_DN11576_c3_g3_i3 |
Mononucleotide |
(A)17 |
17 |
2031 |
2047 |
4 |
125791 |
130166 |
Primers |
TRINITY_DN14618_c2_g1_i5 |
Dinucleotide |
(AG)10 |
20 |
17 |
36 |
6 |
4755405 |
4758077 |
Primers |
TRINITY_DN14618_c2_g1_i5 |
Dinucleotide |
(GA)10 |
20 |
151 |
170 |
6 |
4755405 |
4758077 |
Primers |
TRINITY_DN14618_c2_g1_i5 |
Dinucleotide |
(TG)6 |
12 |
484 |
495 |
6 |
4755405 |
4758077 |
Primers |
TRINITY_DN14618_c2_g1_i5 |
Dinucleotide |
(TG)7 |
14 |
3639 |
3652 |
6 |
4755405 |
4758077 |
Primers |
TRINITY_DN14618_c2_g1_i5 |
Compound |
(T)18gccttcctttaactaaatagattcagtaggtgctaattcagtcattataacacacgttattaagggc(A)26 |
111 |
3785 |
3895 |
6 |
4755405 |
4758077 |
Primers |
TRINITY_DN14091_c2_g2_i26 |
Mononucleotide |
(A)10 |
10 |
1113 |
1122 |
5 |
25167142 |
25168406 |
Primers |
TRINITY_DN13115_c6_g1_i1 |
Mononucleotide |
(A)10 |
10 |
3913 |
3922 |
6 |
3339825 |
3344199 |
Primers |
TRINITY_DN11916_c1_g1_i11 |
Trinucleotide |
(AAT)8 |
24 |
2136 |
2159 |
7 |
14638355 |
14636111 |
Primers |
TRINITY_DN13430_c3_g2_i8 |
Trinucleotide |
(TCG)5 |
15 |
4232 |
4246 |
6 |
5252892 |
5251919 |
Primers |
TRINITY_DN12513_c2_g3_i7 |
Mononucleotide |
(A)18 |
18 |
1079 |
1096 |
1 |
17899195 |
17901511 |
Primers |
TRINITY_DN12513_c2_g3_i7 |
Mononucleotide |
(A)10 |
10 |
2930 |
2939 |
1 |
17899195 |
17901511 |
Primers |
TRINITY_DN12513_c2_g3_i7 |
Mononucleotide |
(A)11 |
11 |
3801 |
3811 |
1 |
17899195 |
17901511 |
Primers |
TRINITY_DN14137_c0_g3_i2 |
Mononucleotide |
(A)10 |
10 |
3354 |
3363 |
5 |
26975510 |
26974015 |
Primers |
TRINITY_DN14137_c0_g3_i2 |
Mononucleotide |
(A)11 |
11 |
3923 |
3933 |
5 |
26975510 |
26974015 |
Primers |
TRINITY_DN14137_c0_g3_i2 |
Mononucleotide |
(A)10 |
10 |
4089 |
4098 |
5 |
26975510 |
26974015 |
Primers |
TRINITY_DN12460_c2_g5_i6 |
Mononucleotide |
(T)12 |
12 |
2380 |
2391 |
6 |
4941717 |
4937343 |
Primers |
TRINITY_DN12460_c2_g5_i6 |
Mononucleotide |
(T)13 |
13 |
2725 |
2737 |
6 |
4941717 |
4937343 |
Primers |
TRINITY_DN12460_c2_g5_i6 |
Mononucleotide |
(A)12 |
12 |
3396 |
3407 |
6 |
4941717 |
4937343 |
Primers |
TRINITY_DN12460_c2_g5_i6 |
Compound |
(A)10gtgattttctttcagacttatatatagaataggggtcgtggtagtggttcgggtattgactcaagtttaccctcttgagttttctgacgaagaagag(A)13 |
120 |
3637 |
3756 |
6 |
4941717 |
4937343 |
Primers |
TRINITY_DN12616_c1_g3_i10 |
Trinucleotide |
(CTT)8 |
24 |
135 |
158 |
6 |
4487115 |
4490190 |
Primers |
TRINITY_DN12616_c1_g3_i10 |
Compound |
(TA)10(TG)7 |
34 |
4108 |
4141 |
6 |
4487115 |
4490190 |
Primers |
TRINITY_DN11762_c2_g1_i7 |
Dinucleotide |
(TA)9 |
18 |
75 |
92 |
3 |
8144303 |
8146210 |
Primers |
TRINITY_DN11762_c2_g1_i7 |
Mononucleotide |
(A)20 |
20 |
1170 |
1189 |
3 |
8144303 |
8146210 |
Primers |
TRINITY_DN11762_c2_g1_i7 |
Dinucleotide |
(GA)8 |
16 |
4336 |
4351 |
3 |
8144303 |
8146210 |
Primers |
TRINITY_DN12738_c0_g1_i14 |
Dinucleotide |
(TC)15 |
30 |
4344 |
4373 |
6 |
69930 |
73864 |
Primers |
TRINITY_DN11155_c3_g9_i1 |
Mononucleotide |
(A)11 |
11 |
1811 |
1821 |
1 |
11528221 |
11523865 |
Primers |
TRINITY_DN12197_c1_g1_i2 |
Hexanucleotide |
(AAGAAA)8 |
48 |
160 |
207 |
7 |
11370737 |
11372444 |
Primers |
TRINITY_DN12359_c1_g2_i7 |
Trinucleotide |
(GGA)5 |
15 |
882 |
896 |
1 |
17051495 |
17055868 |
Primers |
TRINITY_DN12058_c1_g5_i4 |
Mononucleotide |
(T)12 |
12 |
2990 |
3001 |
4 |
14820893 |
14824031 |
Primers |
TRINITY_DN12058_c1_g5_i4 |
Compound |
(T)12ag(GA)9 |
32 |
3861 |
3892 |
4 |
14820893 |
14824031 |
Primers |
TRINITY_DN12058_c1_g5_i4 |
Trinucleotide |
(TTA)11 |
33 |
4337 |
4369 |
4 |
14820893 |
14824031 |
Primers |
TRINITY_DN13855_c2_g5_i8 |
Mononucleotide |
(T)12 |
12 |
4199 |
4210 |
6 |
13020187 |
13022424 |
Primers |
TRINITY_DN12793_c1_g1_i8 |
Dinucleotide |
(GA)10 |
20 |
4208 |
4227 |
4 |
15115481 |
15119839 |
Primers |
TRINITY_DN13671_c0_g1_i18 |
Trinucleotide |
(AGC)5 |
15 |
1089 |
1103 |
3 |
25806890 |
25805407 |
Primers |
TRINITY_DN14220_c1_g1_i9 |
Tetranucleotide |
(AAAG)5 |
20 |
4332 |
4351 |
1 |
19447293 |
19446185 |
Primers |
TRINITY_DN13418_c3_g1_i2 |
Trinucleotide |
(TTC)7 |
21 |
43 |
63 |
3 |
6513775 |
6515983 |
Primers |
TRINITY_DN12837_c2_g2_i23 |
Trinucleotide |
(ATA)8 |
24 |
233 |
256 |
4 |
15408304 |
15405816 |
Primers |
TRINITY_DN11424_c0_g2_i1 |
Mononucleotide |
(A)11 |
11 |
3161 |
3171 |
7 |
3330857 |
3326495 |
Primers |
TRINITY_DN13443_c1_g3_i5 |
Mononucleotide |
(T)10 |
10 |
1513 |
1522 |
3 |
10417967 |
10420535 |
Primers |
TRINITY_DN13443_c1_g3_i5 |
Mononucleotide |
(T)11 |
11 |
2342 |
2352 |
3 |
10417967 |
10420535 |
Primers |
TRINITY_DN13443_c1_g3_i5 |
Tetranucleotide |
(TTAT)5 |
20 |
3713 |
3732 |
3 |
10417967 |
10420535 |
Primers |
TRINITY_DN13443_c1_g3_i5 |
Dinucleotide |
(TA)6 |
12 |
4272 |
4283 |
3 |
10417967 |
10420535 |
Primers |
TRINITY_DN12675_c3_g2_i2 |
Mononucleotide |
(T)12 |
12 |
2737 |
2748 |
7 |
15219005 |
15223376 |
Primers |
TRINITY_DN13929_c3_g1_i6 |
Mononucleotide |
(A)10 |
10 |
827 |
836 |
1 |
22286871 |
22291233 |
Primers |
TRINITY_DN13929_c3_g1_i6 |
Mononucleotide |
(A)14 |
14 |
3382 |
3395 |
1 |
22286871 |
22291233 |
Primers |
TRINITY_DN14304_c1_g2_i25 |
Trinucleotide |
(GTG)5 |
15 |
1865 |
1879 |
6 |
10710754 |
10710010 |
Primers |
TRINITY_DN14304_c1_g2_i25 |
Mononucleotide |
(A)11 |
11 |
4258 |
4268 |
6 |
10710754 |
10710010 |
Primers |
TRINITY_DN14092_c0_g2_i16 |
Compound |
(A)11ggatttg(A)10 |
28 |
1859 |
1886 |
6 |
26170955 |
26168140 |
Primers |
TRINITY_DN12320_c3_g1_i8 |
Compound* |
(A)13(AAT)6* |
29 |
183 |
211 |
2 |
9486558 |
9484277 |
Primers |
TRINITY_DN12320_c3_g1_i8 |
Mononucleotide |
(T)12 |
12 |
464 |
475 |
2 |
9486558 |
9484277 |
Primers |
TRINITY_DN12320_c3_g1_i8 |
Mononucleotide |
(T)10 |
10 |
2865 |
2874 |
2 |
9486558 |
9484277 |
Primers |
TRINITY_DN12320_c3_g1_i8 |
Trinucleotide |
(AAG)7 |
21 |
4236 |
4256 |
2 |
9486558 |
9484277 |
Primers |
TRINITY_DN12660_c2_g2_i4 |
Mononucleotide |
(T)18 |
18 |
488 |
505 |
7 |
5063815 |
5059937 |
Primers |
TRINITY_DN13499_c0_g1_i6 |
Dinucleotide |
(AG)12 |
24 |
4201 |
4224 |
5 |
9002856 |
8999808 |
Primers |
TRINITY_DN12014_c0_g5_i1 |
Trinucleotide |
(CTT)8 |
24 |
260 |
283 |
2 |
12895138 |
12899491 |
Primers |
TRINITY_DN12014_c0_g5_i1 |
Mononucleotide |
(T)13 |
13 |
1657 |
1669 |
2 |
12895138 |
12899491 |
Primers |
TRINITY_DN12014_c0_g5_i1 |
Mononucleotide |
(T)10 |
10 |
2001 |
2010 |
2 |
12895138 |
12899491 |
Primers |
TRINITY_DN7280_c0_g1_i1 |
Mononucleotide |
(T)22 |
22 |
4128 |
4149 |
3 |
8247040 |
8250253 |
Primers |
TRINITY_DN7280_c0_g1_i1 |
Mononucleotide |
(T)11 |
11 |
4286 |
4296 |
3 |
8247040 |
8250253 |
Primers |
TRINITY_DN12817_c4_g1_i1 |
Mononucleotide |
(A)14 |
14 |
1732 |
1745 |
1 |
20485265 |
20482811 |
Primers |
TRINITY_DN12817_c4_g1_i1 |
Mononucleotide |
(A)10 |
10 |
4147 |
4156 |
1 |
20485265 |
20482811 |
Primers |
TRINITY_DN9431_c0_g1_i4 |
Mononucleotide |
(A)10 |
10 |
2651 |
2660 |
6 |
1465224 |
1469576 |
Primers |
TRINITY_DN9431_c0_g1_i4 |
Dinucleotide |
(AT)8 |
16 |
4082 |
4097 |
6 |
1465224 |
1469576 |
Primers |
TRINITY_DN11750_c1_g6_i2 |
Dinucleotide |
(AG)18 |
36 |
85 |
120 |
6 |
1611288 |
1606947 |
Primers |
TRINITY_DN12424_c3_g8_i2 |
Mononucleotide |
(A)10 |
10 |
2893 |
2902 |
1 |
10331669 |
10336002 |
Primers |
TRINITY_DN12424_c3_g8_i2 |
Tetranucleotide |
(GAAT)5 |
20 |
4171 |
4190 |
1 |
10331669 |
10336002 |
Primers |
TRINITY_DN14711_c5_g1_i3 |
Compound |
(T)30gtcttctttaagattgtag(T)10 |
59 |
1 |
59 |
4 |
1723020 |
1727368 |
Primers |
TRINITY_DN14711_c5_g1_i3 |
Mononucleotide |
(A)10 |
10 |
235 |
244 |
4 |
1723020 |
1727368 |
Primers |
TRINITY_DN14711_c5_g1_i3 |
Dinucleotide |
(TC)6 |
12 |
2521 |
2532 |
4 |
1723020 |
1727368 |
Primers |
TRINITY_DN14711_c5_g1_i3 |
Mononucleotide |
(A)11 |
11 |
4326 |
4336 |
4 |
1723020 |
1727368 |
Primers |
TRINITY_DN11882_c0_g1_i4 |
Dinucleotide |
(AG)6 |
12 |
192 |
203 |
7 |
14737022 |
14738093 |
Primers |
TRINITY_DN12579_c0_g1_i2 |
Mononucleotide |
(T)10 |
10 |
4179 |
4188 |
5 |
24750089 |
24748442 |
Primers |
TRINITY_DN13482_c3_g1_i12 |
Compound |
(A)10caatttaatttgtaatatgtttgagaactgaaaaatcatgattagggggt(G)11 |
71 |
2312 |
2382 |
6 |
24937716 |
24935872 |
Primers |
TRINITY_DN14638_c6_g1_i2 |
Mononucleotide |
(T)11 |
11 |
1053 |
1063 |
3 |
18071889 |
18075748 |
Primers |
TRINITY_DN14034_c0_g3_i1 |
Mononucleotide |
(A)11 |
11 |
1426 |
1436 |
4 |
80474 |
84835 |
Primers |
TRINITY_DN13787_c2_g18_i1 |
Mononucleotide |
(T)11 |
11 |
106 |
116 |
2 |
6571038 |
6566900 |
Primers |
TRINITY_DN13787_c2_g18_i1 |
Dinucleotide |
(GA)7 |
14 |
4297 |
4310 |
2 |
6571038 |
6566900 |
Primers |
TRINITY_DN12246_c0_g1_i18 |
Compound |
(GA)16gttcggaagagagactggtggtggggctctc(AG)10 |
83 |
1 |
83 |
4 |
12709903 |
12711435 |
Primers |
TRINITY_DN12064_c1_g3_i10 |
Trinucleotide |
(AGA)6 |
18 |
4235 |
4252 |
3 |
35674792 |
35675480 |
Primers |
TRINITY_DN13837_c2_g1_i6 |
Mononucleotide |
(A)16 |
16 |
4170 |
4185 |
3 |
11544165 |
11542050 |
Primers |
TRINITY_DN13837_c2_g1_i6 |
Mononucleotide |
(A)12 |
12 |
4325 |
4336 |
3 |
11544165 |
11542050 |
Primers |
TRINITY_DN13465_c0_g2_i7 |
Mononucleotide |
(T)10 |
10 |
627 |
636 |
3 |
34372047 |
34373971 |
Primers |
TRINITY_DN13465_c0_g2_i7 |
Dinucleotide |
(GA)6 |
12 |
4330 |
4341 |
3 |
34372047 |
34373971 |
Primers |
TRINITY_DN10757_c0_g1_i8 |
Dinucleotide |
(AT)6 |
12 |
540 |
551 |
4 |
12570904 |
12571639 |
Primers |
TRINITY_DN14194_c1_g1_i4 |
Mononucleotide |
(T)10 |
10 |
4117 |
4126 |
3 |
26507466 |
26505467 |
Primers |
TRINITY_DN11275_c3_g1_i5 |
Trinucleotide |
(TTC)5 |
15 |
45 |
59 |
5 |
3836456 |
3838624 |
Primers |
TRINITY_DN11275_c3_g1_i5 |
Mononucleotide |
(T)11 |
11 |
322 |
332 |
5 |
3836456 |
3838624 |
Primers |
TRINITY_DN11275_c3_g1_i5 |
Mononucleotide |
(T)10 |
10 |
2874 |
2883 |
5 |
3836456 |
3838624 |
Primers |
TRINITY_DN12509_c0_g2_i8 |
Compound |
(T)13(G)14 |
27 |
4314 |
4340 |
7 |
4526637 |
4530077 |
Primers |
TRINITY_DN13020_c1_g1_i8 |
Mononucleotide |
(T)18 |
18 |
50 |
67 |
1 |
16427649 |
16423318 |
Primers |
TRINITY_DN13263_c0_g1_i7 |
Compound* |
(A)10(AAAG)6* |
31 |
3219 |
3249 |
5 |
19612669 |
19615342 |
Primers |
TRINITY_DN11359_c4_g5_i4 |
Trinucleotide |
(AAT)5 |
15 |
3727 |
3741 |
1 |
25028604 |
25032881 |
Primers |
TRINITY_DN11359_c4_g5_i4 |
Mononucleotide |
(T)10 |
10 |
4239 |
4248 |
1 |
25028604 |
25032881 |
Primers |
TRINITY_DN10932_c0_g1_i4 |
Mononucleotide |
(A)12 |
12 |
1880 |
1891 |
2 |
16120435 |
16123869 |
Primers |
TRINITY_DN7138_c0_g1_i2 |
Compound |
(TC)7gatcccatttccctctctctctttcgctcgactctctcactccggctgccgctccccctgcaccgccgtatccatttatatcacgagagaactg(CT)8 |
124 |
167 |
290 |
3 |
28049630 |
28045295 |
Primers |
TRINITY_DN7138_c0_g1_i2 |
Mononucleotide |
(T)10 |
10 |
985 |
994 |
3 |
28049630 |
28045295 |
Primers |
TRINITY_DN12375_c0_g1_i10 |
Compound* |
(A)17(AAG)7*aaaaaagaaagaattgaaaattccaataacactttcttccctatcctgaattacacaaaatggctgtgaggaggag(A)10gaataataatgaaaattagggagaaatgggggagatgaataaatatgagaaatatgatgagatcgtcaatttctaaactcagcaaattaaattaaa(T)14 |
232 |
21 |
252 |
6 |
4235227 |
4238200 |
Primers |
TRINITY_DN12375_c0_g1_i10 |
Mononucleotide |
(A)10 |
10 |
3765 |
3774 |
6 |
4235227 |
4238200 |
Primers |
TRINITY_DN12375_c0_g1_i10 |
Dinucleotide |
(GA)6 |
12 |
4141 |
4152 |
6 |
4235227 |
4238200 |
Primers |
TRINITY_DN12375_c0_g1_i10 |
Tetranucleotide |
(TTTA)6 |
24 |
4267 |
4290 |
6 |
4235227 |
4238200 |
Primers |
TRINITY_DN11556_c1_g4_i2 |
Mononucleotide |
(T)12 |
12 |
362 |
373 |
6 |
20005341 |
20003546 |
Primers |
TRINITY_DN12721_c0_g2_i1 |
Trinucleotide |
(CTT)5 |
15 |
42 |
56 |
1 |
28462447 |
28465862 |
Primers |
TRINITY_DN12721_c0_g2_i1 |
Mononucleotide |
(T)11 |
11 |
2569 |
2579 |
1 |
28462447 |
28465862 |
Primers |
TRINITY_DN13802_c1_g2_i17 |
Mononucleotide |
(T)18 |
18 |
61 |
78 |
3 |
19684271 |
19683241 |
Primers |
TRINITY_DN13802_c1_g2_i17 |
Mononucleotide |
(T)15 |
15 |
455 |
469 |
3 |
19684271 |
19683241 |
Primers |
TRINITY_DN11585_c6_g2_i5 |
Compound |
(T)12cggcatggtaggtaagc(T)11 |
40 |
331 |
370 |
1 |
8600431 |
8599177 |
Primers |
TRINITY_DN11585_c6_g2_i5 |
Mononucleotide |
(T)10 |
10 |
2607 |
2616 |
1 |
8600431 |
8599177 |
Primers |
TRINITY_DN14631_c0_g2_i12 |
Dinucleotide |
(TA)6 |
12 |
1280 |
1291 |
7 |
13641141 |
13643470 |
Primers |
TRINITY_DN12093_c0_g4_i5 |
Trinucleotide |
(AAT)5 |
15 |
33 |
47 |
1 |
21468407 |
21464089 |
Primers |
TRINITY_DN12093_c0_g4_i5 |
Mononucleotide |
(A)13 |
13 |
1202 |
1214 |
1 |
21468407 |
21464089 |
Primers |
TRINITY_DN12093_c0_g4_i5 |
Mononucleotide |
(T)13 |
13 |
1743 |
1755 |
1 |
21468407 |
21464089 |
Primers |
TRINITY_DN12093_c0_g4_i5 |
Mononucleotide |
(T)10 |
10 |
3482 |
3491 |
1 |
21468407 |
21464089 |
Primers |
TRINITY_DN12434_c1_g1_i1 |
Dinucleotide |
(GA)6 |
12 |
227 |
238 |
3 |
27568093 |
27569784 |
Primers |
TRINITY_DN13280_c0_g1_i2 |
Mononucleotide |
(T)10 |
10 |
143 |
152 |
4 |
12779678 |
12782016 |
Primers |
TRINITY_DN13280_c0_g1_i2 |
Mononucleotide |
(T)14 |
14 |
509 |
522 |
4 |
12779678 |
12782016 |
Primers |
TRINITY_DN13280_c0_g1_i2 |
Trinucleotide |
(ATT)7 |
21 |
694 |
714 |
4 |
12779678 |
12782016 |
Primers |
TRINITY_DN13280_c0_g1_i2 |
Mononucleotide |
(A)15 |
15 |
2808 |
2822 |
4 |
12779678 |
12782016 |
Primers |
TRINITY_DN13280_c0_g1_i2 |
Compound |
(T)10catttcaggagcatttcctggaaaacataaacaatttgcatatttaaattttctaccgatttccaacggt(TA)8 |
96 |
3407 |
3502 |
4 |
12779678 |
12782016 |
Primers |
TRINITY_DN12612_c4_g3_i6 |
Mononucleotide |
(T)13 |
13 |
619 |
631 |
4 |
16671545 |
16675500 |
Primers |
TRINITY_DN12324_c1_g1_i7 |
Dinucleotide |
(AC)7 |
14 |
2906 |
2919 |
2 |
17692957 |
17688694 |
Primers |
TRINITY_DN12844_c0_g1_i7 |
Dinucleotide |
(CT)6 |
12 |
198 |
209 |
6 |
15480882 |
15479654 |
Primers |
TRINITY_DN11069_c6_g3_i5 |
Mononucleotide |
(T)10 |
10 |
432 |
441 |
1 |
17379214 |
17382237 |
Primers |
TRINITY_DN14260_c3_g4_i8 |
Mononucleotide |
(A)18 |
18 |
8 |
25 |
6 |
3755879 |
3757388 |
Primers |
TRINITY_DN14260_c3_g4_i8 |
Mononucleotide |
(C)15 |
15 |
2161 |
2175 |
6 |
3755879 |
3757388 |
Primers |
TRINITY_DN14260_c3_g4_i8 |
Dinucleotide |
(TA)7 |
14 |
4199 |
4212 |
6 |
3755879 |
3757388 |
Primers |
TRINITY_DN13358_c0_g1_i17 |
Mononucleotide |
(T)11 |
11 |
2892 |
2902 |
4 |
3072338 |
3070899 |
Primers |
TRINITY_DN13358_c0_g1_i17 |
Mononucleotide |
(A)13 |
13 |
3308 |
3320 |
4 |
3072338 |
3070899 |
Primers |
TRINITY_DN12149_c0_g1_i2 |
Mononucleotide |
(A)10 |
10 |
2743 |
2752 |
5 |
23916318 |
23918124 |
Primers |
TRINITY_DN14362_c0_g1_i7 |
Mononucleotide |
(A)10 |
10 |
904 |
913 |
2 |
6074370 |
6078678 |
Primers |
TRINITY_DN13227_c0_g2_i7 |
Dinucleotide |
(TA)12 |
24 |
4148 |
4171 |
3 |
4888072 |
4885379 |
Primers |
TRINITY_DN14001_c6_g2_i2 |
Compound |
(T)11cttttctaaataataaaatataagaagaagtttaaattaagcaaaacaataacaattaat(TAA)7 |
92 |
4161 |
4252 |
3 |
4522881 |
4518698 |
Primers |
TRINITY_DN12209_c3_g1_i17 |
Compound |
(TCT)8tttttttggccttccatttcttttctttttttctttttttcgtttttttttg(T)11 |
87 |
1057 |
1143 |
1 |
26303767 |
26302970 |
Primers |
TRINITY_DN12209_c3_g1_i17 |
Trinucleotide |
(TGC)6 |
18 |
2556 |
2573 |
1 |
26303767 |
26302970 |
Primers |
TRINITY_DN10264_c0_g1_i7 |
Mononucleotide |
(T)11 |
11 |
2608 |
2618 |
7 |
13126264 |
13122823 |
Primers |
TRINITY_DN12156_c5_g2_i6 |
Mononucleotide |
(T)10 |
10 |
1582 |
1591 |
1 |
24106292 |
24108294 |
Primers |
TRINITY_DN14497_c1_g1_i4 |
Mononucleotide |
(A)12 |
12 |
2489 |
2500 |
5 |
22071003 |
22073227 |
Primers |
TRINITY_DN13866_c1_g1_i4 |
Mononucleotide |
(T)10 |
10 |
160 |
169 |
2 |
1231786 |
1236092 |
Primers |
TRINITY_DN13866_c1_g1_i4 |
Compound |
(T)11actttagagagcttatggctgaaaaggaacggaggtgttttgtatgagagagcggcaggactttcttgggtgtgaaaaggagaggatg(TA)6 |
111 |
2606 |
2716 |
2 |
1231786 |
1236092 |
Primers |
TRINITY_DN13818_c1_g2_i7 |
Compound |
(AAG)7ag(A)31 |
54 |
4247 |
4300 |
3 |
321033 |
323079 |
Primers |
TRINITY_DN14499_c2_g1_i6 |
Mononucleotide |
(A)10 |
10 |
3874 |
3883 |
6 |
8123867 |
8120592 |
Primers |
TRINITY_DN10786_c0_g1_i10 |
Mononucleotide |
(T)15 |
15 |
578 |
592 |
5 |
26394360 |
26392442 |
Primers |
TRINITY_DN10786_c0_g1_i10 |
Trinucleotide |
(CCG)9 |
27 |
1961 |
1987 |
5 |
26394360 |
26392442 |
Primers |
TRINITY_DN10786_c0_g1_i10 |
Mononucleotide |
(A)14 |
14 |
3658 |
3671 |
5 |
26394360 |
26392442 |
Primers |
TRINITY_DN13614_c0_g2_i18 |
Mononucleotide |
(T)11 |
11 |
180 |
190 |
3 |
30956576 |
30954608 |
Primers |
TRINITY_DN13614_c0_g2_i18 |
Compound |
(T)15cgttttggtgtattaacggaaattggggtttcgtcacttggggcgtccatggaatgaaggtttaattgagttttttcc(T)14gg(T)10 |
119 |
581 |
699 |
3 |
30956576 |
30954608 |
Primers |
TRINITY_DN13614_c0_g2_i18 |
Trinucleotide |
(GGT)5 |
15 |
2010 |
2024 |
3 |
30956576 |
30954608 |
Primers |
TRINITY_DN13010_c2_g3_i9 |
Mononucleotide |
(A)16 |
16 |
3873 |
3888 |
3 |
14140914 |
14142804 |
Primers |
TRINITY_DN11232_c1_g5_i1 |
Dinucleotide |
(AT)7 |
14 |
2792 |
2805 |
4 |
4716938 |
4712662 |
Primers |
TRINITY_DN11232_c1_g5_i1 |
Mononucleotide |
(T)10 |
10 |
3373 |
3382 |
4 |
4716938 |
4712662 |
Primers |
TRINITY_DN11232_c1_g5_i1 |
Mononucleotide |
(T)18 |
18 |
3810 |
3827 |
4 |
4716938 |
4712662 |
Primers |
TRINITY_DN11232_c1_g5_i1 |
Mononucleotide |
(A)10 |
10 |
4078 |
4087 |
4 |
4716938 |
4712662 |
Primers |
TRINITY_DN11232_c1_g5_i1 |
Dinucleotide |
(AT)17 |
34 |
4270 |
4303 |
4 |
4716938 |
4712662 |
Primers |
TRINITY_DN14513_c1_g4_i5 |
Mononucleotide |
(A)10 |
10 |
3258 |
3267 |
4 |
14778420 |
14780241 |
Primers |
TRINITY_DN14513_c1_g4_i5 |
Mononucleotide |
(T)16 |
16 |
3508 |
3523 |
4 |
14778420 |
14780241 |
Primers |
TRINITY_DN11567_c0_g1_i13 |
Dinucleotide |
(CT)7 |
14 |
145 |
158 |
4 |
9879559 |
9881287 |
Primers |
TRINITY_DN14460_c0_g2_i9 |
Dinucleotide |
(CT)16 |
32 |
91 |
122 |
3 |
22611302 |
22614416 |
Primers |
TRINITY_DN14460_c0_g2_i9 |
Mononucleotide |
(T)11 |
11 |
510 |
520 |
3 |
22611302 |
22614416 |
Primers |
TRINITY_DN14460_c0_g2_i9 |
Mononucleotide |
(T)16 |
16 |
676 |
691 |
3 |
22611302 |
22614416 |
Primers |
TRINITY_DN14460_c0_g2_i9 |
Mononucleotide |
(T)11 |
11 |
4196 |
4206 |
3 |
22611302 |
22614416 |
Primers |
TRINITY_DN11837_c0_g1_i3 |
Dinucleotide |
(AT)10 |
20 |
2343 |
2362 |
6 |
27571323 |
27573754 |
Primers |
TRINITY_DN11837_c0_g1_i3 |
Trinucleotide |
(TAT)7 |
21 |
3099 |
3119 |
6 |
27571323 |
27573754 |
Primers |
TRINITY_DN11837_c0_g1_i3 |
Compound |
(GA)6accttccctg(ATT)5 |
37 |
4058 |
4094 |
6 |
27571323 |
27573754 |
Primers |
TRINITY_DN12089_c2_g4_i5 |
Mononucleotide |
(T)10 |
10 |
472 |
481 |
4 |
6776308 |
6773248 |
Primers |
TRINITY_DN12189_c0_g2_i5 |
Tetranucleotide |
(TTCT)6 |
24 |
66 |
89 |
6 |
20029957 |
20034256 |
Primers |
TRINITY_DN12189_c0_g2_i5 |
Mononucleotide |
(A)10 |
10 |
346 |
355 |
6 |
20029957 |
20034256 |
Primers |
TRINITY_DN12189_c0_g2_i5 |
Mononucleotide |
(T)14 |
14 |
457 |
470 |
6 |
20029957 |
20034256 |
Primers |
TRINITY_DN12189_c0_g2_i5 |
Mononucleotide |
(A)11 |
11 |
1889 |
1899 |
6 |
20029957 |
20034256 |
Primers |
TRINITY_DN12189_c0_g2_i5 |
Trinucleotide |
(AAC)5 |
15 |
3504 |
3518 |
6 |
20029957 |
20034256 |
Primers |
TRINITY_DN11761_c3_g2_i5 |
Compound |
(T)11ccctttttgttcttagtataattctcttgtactttgagcttcattt(A)10 |
67 |
682 |
748 |
5 |
16619807 |
16622528 |
Primers |
TRINITY_DN11761_c3_g2_i5 |
Mononucleotide |
(T)10 |
10 |
974 |
983 |
5 |
16619807 |
16622528 |
Primers |
TRINITY_DN9957_c0_g1_i7 |
Mononucleotide |
(T)11 |
11 |
2865 |
2875 |
5 |
5003602 |
5000488 |
Primers |
TRINITY_DN9859_c0_g1_i8 |
Mononucleotide |
(T)10 |
10 |
3133 |
3142 |
7 |
1505894 |
1501594 |
Primers |
TRINITY_DN9859_c0_g1_i8 |
Pentanucleotide |
(AAAAG)5 |
25 |
3764 |
3788 |
7 |
1505894 |
1501594 |
Primers |
TRINITY_DN14364_c3_g1_i2 |
Mononucleotide |
(T)14 |
14 |
3363 |
3376 |
4 |
17771177 |
17774325 |
Primers |
TRINITY_DN14364_c3_g1_i2 |
Trinucleotide |
(AGA)7 |
21 |
4091 |
4111 |
4 |
17771177 |
17774325 |
Primers |
TRINITY_DN14695_c0_g1_i18 |
Compound |
(TC)8(TA)7 |
30 |
2861 |
2890 |
7 |
8464427 |
8463384 |
Primers |
TRINITY_DN12619_c0_g1_i19 |
Mononucleotide |
(T)10 |
10 |
2012 |
2021 |
1 |
16493198 |
16495261 |
Primers |
TRINITY_DN12619_c0_g1_i19 |
Mononucleotide |
(T)10 |
10 |
3934 |
3943 |
1 |
16493198 |
16495261 |
Primers |
TRINITY_DN11403_c1_g1_i16 |
Mononucleotide |
(T)12 |
12 |
3157 |
3168 |
4 |
2514000 |
2510821 |
Primers |
TRINITY_DN11403_c1_g1_i16 |
Mononucleotide |
(A)11 |
11 |
4273 |
4283 |
4 |
2514000 |
2510821 |
Primers |
TRINITY_DN12394_c2_g2_i21 |
Mononucleotide |
(T)12 |
12 |
4206 |
4217 |
3 |
15126302 |
15128465 |
Primers |
TRINITY_DN11586_c0_g1_i2 |
Mononucleotide |
(T)13 |
13 |
455 |
467 |
4 |
551020 |
549306 |
Primers |
TRINITY_DN11586_c0_g1_i2 |
Mononucleotide |
(T)42 |
42 |
4239 |
4280 |
4 |
551020 |
549306 |
Primers |
TRINITY_DN13006_c2_g1_i2 |
Trinucleotide |
(ATA)5 |
15 |
4259 |
4273 |
7 |
15802356 |
15804876 |
Primers |
TRINITY_DN13103_c0_g1_i19 |
Mononucleotide |
(T)11 |
11 |
2962 |
2972 |
1 |
15278630 |
15276547 |
Primers |
TRINITY_DN12793_c0_g1_i6 |
Dinucleotide |
(TC)11 |
22 |
123 |
144 |
4 |
20215628 |
20211413 |
Primers |
TRINITY_DN12949_c0_g1_i10 |
Trinucleotide |
(AAG)8 |
24 |
4198 |
4221 |
6 |
6468965 |
6470478 |
Primers |
TRINITY_DN13219_c2_g2_i3 |
Mononucleotide |
(G)24 |
24 |
4249 |
4272 |
1 |
3194991 |
3192794 |
Primers |
TRINITY_DN12764_c0_g1_i11 |
Mononucleotide |
(A)10 |
10 |
1643 |
1652 |
6 |
14929723 |
14928802 |
Primers |
TRINITY_DN12100_c1_g5_i2 |
Trinucleotide |
(TTC)8 |
24 |
225 |
248 |
2 |
12224229 |
12227120 |
Primers |
TRINITY_DN13001_c1_g1_i6 |
Trinucleotide |
(CTT)5 |
15 |
208 |
222 |
3 |
1646068 |
1642339 |
Primers |
TRINITY_DN13001_c1_g1_i6 |
Mononucleotide |
(T)12 |
12 |
870 |
881 |
3 |
1646068 |
1642339 |
Primers |
TRINITY_DN13001_c1_g1_i6 |
Mononucleotide |
(A)10 |
10 |
3874 |
3883 |
3 |
1646068 |
1642339 |
Primers |
TRINITY_DN11470_c1_g1_i9 |
Mononucleotide |
(A)10 |
10 |
4084 |
4093 |
6 |
27128253 |
27127172 |
Primers |
TRINITY_DN11470_c1_g1_i9 |
Trinucleotide |
(TGA)8 |
24 |
4252 |
4275 |
6 |
27128253 |
27127172 |
Primers |
TRINITY_DN14594_c1_g1_i5 |
Mononucleotide |
(T)10 |
10 |
1078 |
1087 |
1 |
17620009 |
17621958 |
Primers |
TRINITY_DN14594_c1_g1_i5 |
Mononucleotide |
(A)10 |
10 |
1806 |
1815 |
1 |
17620009 |
17621958 |
Primers |
TRINITY_DN9708_c0_g1_i9 |
Mononucleotide |
(A)10 |
10 |
853 |
862 |
4 |
22405715 |
22408442 |
Primers |
TRINITY_DN11080_c2_g4_i2 |
Compound |
(T)12aa(T)12 |
26 |
1166 |
1191 |
2 |
19717718 |
19715435 |
Primers |
TRINITY_DN11080_c2_g4_i2 |
Dinucleotide |
(CT)10 |
20 |
2481 |
2500 |
2 |
19717718 |
19715435 |
Primers |
TRINITY_DN13374_c4_g3_i3 |
Mononucleotide |
(T)14 |
14 |
3610 |
3623 |
6 |
25859278 |
25862646 |
Primers |
TRINITY_DN13766_c1_g2_i11 |
Trinucleotide |
(CCT)8 |
24 |
3772 |
3795 |
6 |
15516916 |
15517732 |
Primers |
TRINITY_DN13766_c1_g2_i11 |
Trinucleotide |
(GTC)5 |
15 |
3950 |
3964 |
6 |
15516916 |
15517732 |
Primers |
TRINITY_DN12389_c2_g1_i13 |
Compound |
(T)11ctactctccaacttttaatcttctttttcttttattttcttttattttcttttatttataaaaccaaaaaaagaat(CA)6(CT)7tattagttattac(T)12 |
138 |
223 |
360 |
6 |
28927977 |
28930141 |
Primers |
TRINITY_DN12389_c2_g1_i13 |
Mononucleotide |
(T)15 |
15 |
1802 |
1816 |
6 |
28927977 |
28930141 |
Primers |
TRINITY_DN12177_c0_g3_i5 |
Mononucleotide |
(T)13 |
13 |
3961 |
3973 |
1 |
20527644 |
20529200 |
Primers |
TRINITY_DN13898_c1_g3_i6 |
Mononucleotide |
(A)10 |
10 |
148 |
157 |
3 |
6832140 |
6836411 |
Primers |
TRINITY_DN13838_c2_g7_i1 |
Hexanucleotide |
(TCACCT)7 |
42 |
47 |
88 |
3 |
4133353 |
4137525 |
Primers |
TRINITY_DN13838_c2_g7_i1 |
Mononucleotide |
(T)12 |
12 |
4257 |
4268 |
3 |
4133353 |
4137525 |
Primers |
TRINITY_DN10737_c0_g1_i1 |
Trinucleotide |
(CTT)9 |
27 |
595 |
621 |
3 |
11641822 |
11640435 |
Primers |
TRINITY_DN12551_c0_g4_i6 |
Trinucleotide |
(GCT)7 |
21 |
156 |
176 |
5 |
26729217 |
26727184 |
Primers |
TRINITY_DN8129_c0_g1_i2 |
Mononucleotide |
(T)10 |
10 |
1445 |
1454 |
6 |
9296365 |
9292106 |
Primers |
TRINITY_DN12058_c1_g4_i16 |
Mononucleotide |
(A)20 |
20 |
3759 |
3778 |
2 |
17988077 |
17990450 |
Primers |
TRINITY_DN12058_c1_g4_i16 |
Dinucleotide |
(TC)10 |
20 |
4035 |
4054 |
2 |
17988077 |
17990450 |
Primers |
TRINITY_DN12206_c2_g2_i8 |
Mononucleotide |
(T)12 |
12 |
478 |
489 |
6 |
26984744 |
26981950 |
Primers |
TRINITY_DN12206_c2_g2_i8 |
Compound |
(T)12c(T)10 |
23 |
770 |
792 |
6 |
26984744 |
26981950 |
Primers |
TRINITY_DN12206_c2_g2_i8 |
Mononucleotide |
(A)11 |
11 |
1488 |
1498 |
6 |
26984744 |
26981950 |
Primers |
TRINITY_DN12206_c2_g2_i8 |
Tetranucleotide |
(ATTC)5 |
20 |
1642 |
1661 |
6 |
26984744 |
26981950 |
Primers |
TRINITY_DN12206_c2_g2_i8 |
Mononucleotide |
(T)10 |
10 |
1840 |
1849 |
6 |
26984744 |
26981950 |
Primers |
TRINITY_DN12206_c2_g2_i8 |
Tetranucleotide |
(TTTC)6 |
24 |
4019 |
4042 |
6 |
26984744 |
26981950 |
Primers |
TRINITY_DN13085_c1_g1_i2 |
Mononucleotide |
(A)10 |
10 |
1111 |
1120 |
3 |
22437298 |
22439354 |
Primers |
TRINITY_DN13085_c1_g1_i2 |
Dinucleotide |
(TC)7 |
14 |
1840 |
1853 |
3 |
22437298 |
22439354 |
Primers |
TRINITY_DN13085_c1_g1_i2 |
Mononucleotide |
(T)10 |
10 |
4144 |
4153 |
3 |
22437298 |
22439354 |
Primers |
TRINITY_DN11656_c1_g1_i22 |
Mononucleotide |
(T)10 |
10 |
2639 |
2648 |
2 |
16590292 |
16592328 |
Primers |
TRINITY_DN14317_c0_g1_i29 |
Mononucleotide |
(A)10 |
10 |
3568 |
3577 |
6 |
26549111 |
26550550 |
Primers |
TRINITY_DN11857_c0_g1_i14 |
Trinucleotide |
(ATA)5 |
15 |
236 |
250 |
5 |
16363917 |
16368173 |
Primers |
TRINITY_DN11857_c0_g1_i14 |
Compound |
(TA)6ttagaaattaagttatatttttaaccctactaagttataaatatcgatattagtatttagttttatatatattaaactaaataga(T)12 |
109 |
867 |
975 |
5 |
16363917 |
16368173 |
Primers |
TRINITY_DN10934_c0_g1_i13 |
Mononucleotide |
(T)14 |
14 |
2275 |
2288 |
2 |
16701931 |
16704957 |
Primers |
TRINITY_DN10934_c0_g1_i13 |
Mononucleotide |
(T)12 |
12 |
3387 |
3398 |
2 |
16701931 |
16704957 |
Primers |
TRINITY_DN9387_c0_g1_i1 |
Dinucleotide |
(TG)7 |
14 |
4220 |
4233 |
3 |
7404888 |
7408041 |
Primers |
TRINITY_DN12421_c2_g1_i7 |
Mononucleotide |
(A)11 |
11 |
343 |
353 |
7 |
7213809 |
7210265 |
Primers |
TRINITY_DN12066_c0_g3_i2 |
Compound |
(TAA)5tacttatcaattccctcacccaaccattttgacttacgtctctccatttcccacaccaaccatcttttttctaccctcaactctatt(TCC)5 |
117 |
1338 |
1454 |
6 |
23582692 |
23586951 |
Primers |
TRINITY_DN12066_c0_g3_i2 |
Mononucleotide |
(A)10 |
10 |
1745 |
1754 |
6 |
23582692 |
23586951 |
Primers |
TRINITY_DN12066_c0_g3_i2 |
Mononucleotide |
(T)13 |
13 |
2687 |
2699 |
6 |
23582692 |
23586951 |
Primers |
TRINITY_DN12066_c0_g3_i2 |
Mononucleotide |
(A)10 |
10 |
3180 |
3189 |
6 |
23582692 |
23586951 |
Primers |
TRINITY_DN12368_c3_g1_i2 |
Mononucleotide |
(A)15 |
15 |
846 |
860 |
3 |
22719362 |
22715238 |
Primers |
TRINITY_DN11690_c1_g4_i7 |
Mononucleotide |
(T)12 |
12 |
488 |
499 |
7 |
13618196 |
13620477 |
Primers |
TRINITY_DN11690_c1_g4_i7 |
Mononucleotide |
(T)12 |
12 |
3854 |
3865 |
7 |
13618196 |
13620477 |
Primers |
TRINITY_DN13686_c3_g5_i6 |
Mononucleotide |
(T)12 |
12 |
2199 |
2210 |
7 |
10441321 |
10438278 |
Primers |
TRINITY_DN13686_c3_g5_i6 |
Compound |
(TA)8aaaatataagaaacaatctttcgttggttgtttgacttatagttatatt(TA)10 |
85 |
2993 |
3077 |
7 |
10441321 |
10438278 |
Primers |
TRINITY_DN14186_c1_g4_i1 |
Trinucleotide |
(GAA)5 |
15 |
688 |
702 |
1 |
15715158 |
15716614 |
Primers |
TRINITY_DN14186_c1_g4_i1 |
Mononucleotide |
(T)10 |
10 |
2369 |
2378 |
1 |
15715158 |
15716614 |
Primers |
TRINITY_DN12589_c2_g1_i2 |
Mononucleotide |
(A)18 |
18 |
3495 |
3512 |
3 |
33758481 |
33754826 |
Primers |
TRINITY_DN13957_c0_g2_i2 |
Dinucleotide |
(CT)9 |
18 |
3840 |
3857 |
3 |
34723024 |
34721840 |
Primers |
TRINITY_DN14676_c3_g1_i10 |
Compound |
(TC)6ttctctccagctttctctctctt(TC)8 |
51 |
3 |
53 |
6 |
4218605 |
4222442 |
Primers |
TRINITY_DN12409_c2_g1_i2 |
Mononucleotide |
(A)17 |
17 |
4229 |
4245 |
3 |
7243442 |
7241882 |
Primers |
TRINITY_DN13279_c0_g1_i3 |
Trinucleotide |
(TCC)5 |
15 |
161 |
175 |
3 |
38749254 |
38746001 |
Primers |
TRINITY_DN13279_c0_g1_i3 |
Compound |
(AT)6(GT)10 |
32 |
2256 |
2287 |
3 |
38749254 |
38746001 |
Primers |
TRINITY_DN13752_c2_g1_i5 |
Trinucleotide |
(TGG)6 |
18 |
1246 |
1263 |
4 |
8797726 |
8797002 |
Primers |
TRINITY_DN13121_c1_g2_i2 |
Compound |
(T)15cttgagtttcaattttggatgtgagagtttattgtgtacatgagatttggacacagggtttggtttagttttcaaccacccccctcccccca(CT)7 |
121 |
807 |
927 |
3 |
10913600 |
10917069 |
Primers |
TRINITY_DN13909_c4_g2_i11 |
Hexanucleotide |
(CTTTTT)5 |
30 |
72 |
101 |
2 |
16684438 |
16688687 |
Primers |
TRINITY_DN13909_c4_g2_i11 |
Dinucleotide |
(GT)8 |
16 |
704 |
719 |
2 |
16684438 |
16688687 |
Primers |
TRINITY_DN13909_c4_g2_i11 |
Mononucleotide |
(A)10 |
10 |
2886 |
2895 |
2 |
16684438 |
16688687 |
Primers |
TRINITY_DN11666_c2_g4_i3 |
Mononucleotide |
(T)10 |
10 |
1192 |
1201 |
6 |
17866441 |
17869451 |
Primers |
TRINITY_DN11666_c2_g4_i3 |
Mononucleotide |
(C)11 |
11 |
1997 |
2007 |
6 |
17866441 |
17869451 |
Primers |
TRINITY_DN12518_c2_g3_i9 |
Mononucleotide |
(T)15 |
15 |
3758 |
3772 |
3 |
25507254 |
25509150 |
Primers |
TRINITY_DN12518_c2_g3_i9 |
Mononucleotide |
(T)11 |
11 |
4190 |
4200 |
3 |
25507254 |
25509150 |
Primers |
TRINITY_DN10344_c0_g1_i6 |
Trinucleotide |
(GCA)5 |
15 |
3761 |
3775 |
4 |
11478783 |
11481171 |
Primers |
TRINITY_DN7163_c0_g1_i1 |
Trinucleotide |
(GTT)6 |
18 |
214 |
231 |
5 |
27823003 |
27827251 |
Primers |
TRINITY_DN13325_c0_g3_i3 |
Dinucleotide |
(TA)14 |
28 |
43 |
70 |
2 |
16734141 |
16738367 |
Primers |
TRINITY_DN14360_c2_g4_i2 |
Compound |
(CGG)6ctgatgcagaagg(AGA)6 |
49 |
3338 |
3386 |
1 |
1230296 |
1233638 |
Primers |
TRINITY_DN14360_c2_g4_i2 |
Compound* |
(A)11(AAG)6* |
27 |
3972 |
3998 |
1 |
1230296 |
1233638 |
Primers |
TRINITY_DN11608_c4_g4_i14 |
Mononucleotide |
(A)14 |
14 |
1610 |
1623 |
5 |
11361133 |
11359798 |
Primers |
TRINITY_DN11608_c4_g4_i14 |
Mononucleotide |
(A)12 |
12 |
1761 |
1772 |
5 |
11361133 |
11359798 |
Primers |
TRINITY_DN11608_c4_g4_i14 |
Trinucleotide |
(TTG)5 |
15 |
2588 |
2602 |
5 |
11361133 |
11359798 |
Primers |
TRINITY_DN11608_c4_g4_i14 |
Mononucleotide |
(A)13 |
13 |
4004 |
4016 |
5 |
11361133 |
11359798 |
Primers |
TRINITY_DN14180_c3_g1_i1 |
Dinucleotide |
(TA)17 |
34 |
1 |
34 |
4 |
5608791 |
5606735 |
Primers |
TRINITY_DN14180_c3_g1_i1 |
Mononucleotide |
(T)15 |
15 |
673 |
687 |
4 |
5608791 |
5606735 |
Primers |
TRINITY_DN14180_c3_g1_i1 |
Dinucleotide |
(AC)8 |
16 |
3691 |
3706 |
4 |
5608791 |
5606735 |
Primers |
TRINITY_DN10366_c0_g1_i8 |
Mononucleotide |
(A)15 |
15 |
3431 |
3445 |
2 |
15740500 |
15736264 |
Primers |
TRINITY_DN10366_c0_g1_i8 |
Mononucleotide |
(A)11 |
11 |
3645 |
3655 |
2 |
15740500 |
15736264 |
Primers |
TRINITY_DN10366_c0_g1_i8 |
Compound |
(A)12t(AG)8 |
29 |
3865 |
3893 |
2 |
15740500 |
15736264 |
Primers |
TRINITY_DN10366_c0_g1_i8 |
Tetranucleotide |
(CTTC)6 |
24 |
4115 |
4138 |
2 |
15740500 |
15736264 |
Primers |
TRINITY_DN11615_c3_g1_i1 |
Hexanucleotide |
(GAAACA)5 |
30 |
4079 |
4108 |
7 |
11015253 |
11012315 |
Primers |
TRINITY_DN13137_c1_g2_i2 |
Trinucleotide |
(ATG)6 |
18 |
2985 |
3002 |
3 |
31143897 |
31142624 |
Primers |
TRINITY_DN9917_c0_g1_i5 |
Mononucleotide |
(A)13 |
13 |
3176 |
3188 |
6 |
191816 |
195990 |
Primers |
TRINITY_DN13233_c2_g3_i4 |
Dinucleotide |
(AG)6 |
12 |
870 |
881 |
1 |
23381889 |
23386118 |
Primers |
TRINITY_DN13233_c2_g3_i4 |
Trinucleotide |
(GTT)7 |
21 |
1116 |
1136 |
1 |
23381889 |
23386118 |
Primers |
TRINITY_DN13233_c2_g3_i4 |
Mononucleotide |
(A)15 |
15 |
3698 |
3712 |
1 |
23381889 |
23386118 |
Primers |
TRINITY_DN13233_c2_g3_i4 |
Dinucleotide |
(AG)15 |
30 |
4131 |
4160 |
1 |
23381889 |
23386118 |
Primers |
TRINITY_DN11072_c2_g1_i4 |
Trinucleotide |
(TTC)5 |
15 |
127 |
141 |
5 |
15348672 |
15344439 |
Primers |
TRINITY_DN11264_c5_g1_i4 |
Mononucleotide |
(A)16 |
16 |
10 |
25 |
4 |
15109327 |
15113552 |
Primers |
TRINITY_DN11264_c5_g1_i4 |
Mononucleotide |
(A)10 |
10 |
1660 |
1669 |
4 |
15109327 |
15113552 |
Primers |
TRINITY_DN11264_c5_g1_i4 |
Dinucleotide |
(AG)11 |
22 |
4212 |
4233 |
4 |
15109327 |
15113552 |
Primers |
TRINITY_DN13375_c0_g1_i1 |
Pentanucleotide |
(TTGCT)5 |
25 |
4169 |
4193 |
2 |
7351554 |
7350109 |
Primers |
TRINITY_DN13244_c1_g7_i6 |
Compound |
(T)11acagaacagaagatggaacaacc(A)12 |
46 |
811 |
856 |
6 |
25304245 |
25301176 |
Primers |
TRINITY_DN13244_c1_g7_i6 |
Trinucleotide |
(TGC)5 |
15 |
2648 |
2662 |
6 |
25304245 |
25301176 |
Primers |
TRINITY_DN13244_c1_g7_i6 |
Mononucleotide |
(A)10 |
10 |
2808 |
2817 |
6 |
25304245 |
25301176 |
Primers |
TRINITY_DN13244_c1_g7_i6 |
Compound |
(AG)8gtagctcagagatagattagaagaagaaattg(A)16 |
64 |
2996 |
3059 |
6 |
25304245 |
25301176 |
Primers |
TRINITY_DN13244_c1_g7_i6 |
Mononucleotide |
(A)10 |
10 |
3202 |
3211 |
6 |
25304245 |
25301176 |
Primers |
TRINITY_DN13244_c1_g7_i6 |
Dinucleotide |
(AG)8 |
16 |
4173 |
4188 |
6 |
25304245 |
25301176 |
Primers |
TRINITY_DN12983_c0_g1_i5 |
Compound |
(A)11ttgtagagaggaaaagaatg(GAA)7 |
52 |
4162 |
4213 |
6 |
403455 |
405623 |
Primers |
TRINITY_DN11812_c1_g5_i3 |
Trinucleotide |
(TTC)9 |
27 |
159 |
185 |
5 |
10256630 |
10258998 |
Primers |
TRINITY_DN11812_c1_g5_i3 |
Mononucleotide |
(T)10 |
10 |
1887 |
1896 |
5 |
10256630 |
10258998 |
Primers |
TRINITY_DN11812_c1_g5_i3 |
Mononucleotide |
(T)17 |
17 |
4152 |
4168 |
5 |
10256630 |
10258998 |
Primers |
TRINITY_DN12031_c1_g2_i8 |
Mononucleotide |
(A)15 |
15 |
188 |
202 |
6 |
14368281 |
14369195 |
Primers |
TRINITY_DN12031_c1_g2_i8 |
Mononucleotide |
(T)10 |
10 |
1206 |
1215 |
6 |
14368281 |
14369195 |
Primers |
TRINITY_DN12056_c1_g2_i3 |
Mononucleotide |
(T)10 |
10 |
1742 |
1751 |
7 |
13897883 |
13893656 |
Primers |
TRINITY_DN12056_c1_g2_i3 |
Mononucleotide |
(A)10 |
10 |
2559 |
2568 |
7 |
13897883 |
13893656 |
Primers |
TRINITY_DN12056_c1_g2_i3 |
Mononucleotide |
(T)12 |
12 |
4093 |
4104 |
7 |
13897883 |
13893656 |
Primers |
TRINITY_DN13606_c1_g1_i4 |
Mononucleotide |
(T)10 |
10 |
325 |
334 |
2 |
10270416 |
|