ssr_primer
Primer Details for TRINITY_DN11080_c2_g2_i6 |
|---|
| (AGA)5: Primer 1 details |
|---|
| Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CCAATTGGCTCAACAACGCA | AATCGGACGGGAAAGCCATT | Start: 569 |
| Tm | 59.968 | 60.034 | End: 738 |
| Size | 20 | 20 | 170 |
| Primer 2 details |
|---|
| Sequence | CTCCTTTTCTCCCATGGCGT | TGCGTTGTTGAGCCAATTGG | Start: 357 |
| Tm | 60.035 | 59.968 | End: 588 |
| Size | 20 | 20 | 232 |
| Primer 3 details |
|---|
| Sequence | AGGAGTTTCACCTGGCGAAG | GTTCTTGCCTGACCCTCTCC | Start: 2699 |
| Tm | 59.965 | 60.036 | End: 2874 |
| Size | 20 | 20 | 176 |
| Primer 4 details |
|---|
| Sequence | CCCCAATTGGCTCAACAACG | AATCGGACGGGAAAGCCATT | Start: 567 |
| Tm | 60.038 | 60.034 | End: 738 |
| Size | 20 | 20 | 172 |
| Primer 5 details |
|---|
| Sequence | CTCCTTTTCTCCCATGGCGT | CGTTGTTGAGCCAATTGGGG | Start: 357 |
| Tm | 60.035 | 60.038 | End: 586 |
| Size | 20 | 20 | 230 |
(TC)7: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CCAATTGGCTCAACAACGCA | AATCGGACGGGAAAGCCATT | Start: 569 |
| Tm | 59.968 | 60.034 | End: 738 |
| Size | 20 | 20 | 170 |
| Primer 2 details |
|---|
| Sequence | CTCCTTTTCTCCCATGGCGT | TGCGTTGTTGAGCCAATTGG | Start: 357 |
| Tm | 60.035 | 59.968 | End: 588 |
| Size | 20 | 20 | 232 |
| Primer 3 details |
|---|
| Sequence | AGGAGTTTCACCTGGCGAAG | GTTCTTGCCTGACCCTCTCC | Start: 2699 |
| Tm | 59.965 | 60.036 | End: 2874 |
| Size | 20 | 20 | 176 |
| Primer 4 details |
|---|
| Sequence | CCCCAATTGGCTCAACAACG | AATCGGACGGGAAAGCCATT | Start: 567 |
| Tm | 60.038 | 60.034 | End: 738 |
| Size | 20 | 20 | 172 |
| Primer 5 details |
|---|
| Sequence | CTCCTTTTCTCCCATGGCGT | CGTTGTTGAGCCAATTGGGG | Start: 357 |
| Tm | 60.035 | 60.038 | End: 586 |
| Size | 20 | 20 | 230 |
(T)11: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CCAATTGGCTCAACAACGCA | AATCGGACGGGAAAGCCATT | Start: 569 |
| Tm | 59.968 | 60.034 | End: 738 |
| Size | 20 | 20 | 170 |
| Primer 2 details |
|---|
| Sequence | CTCCTTTTCTCCCATGGCGT | TGCGTTGTTGAGCCAATTGG | Start: 357 |
| Tm | 60.035 | 59.968 | End: 588 |
| Size | 20 | 20 | 232 |
| Primer 3 details |
|---|
| Sequence | AGGAGTTTCACCTGGCGAAG | GTTCTTGCCTGACCCTCTCC | Start: 2699 |
| Tm | 59.965 | 60.036 | End: 2874 |
| Size | 20 | 20 | 176 |
| Primer 4 details |
|---|
| Sequence | CCCCAATTGGCTCAACAACG | AATCGGACGGGAAAGCCATT | Start: 567 |
| Tm | 60.038 | 60.034 | End: 738 |
| Size | 20 | 20 | 172 |
| Primer 5 details |
|---|
| Sequence | CTCCTTTTCTCCCATGGCGT | CGTTGTTGAGCCAATTGGGG | Start: 357 |
| Tm | 60.035 | 60.038 | End: 586 |
| Size | 20 | 20 | 230 |
(T)15: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CCAATTGGCTCAACAACGCA | AATCGGACGGGAAAGCCATT | Start: 569 |
| Tm | 59.968 | 60.034 | End: 738 |
| Size | 20 | 20 | 170 |
| Primer 2 details |
|---|
| Sequence | CTCCTTTTCTCCCATGGCGT | TGCGTTGTTGAGCCAATTGG | Start: 357 |
| Tm | 60.035 | 59.968 | End: 588 |
| Size | 20 | 20 | 232 |
| Primer 3 details |
|---|
| Sequence | AGGAGTTTCACCTGGCGAAG | GTTCTTGCCTGACCCTCTCC | Start: 2699 |
| Tm | 59.965 | 60.036 | End: 2874 |
| Size | 20 | 20 | 176 |
| Primer 4 details |
|---|
| Sequence | CCCCAATTGGCTCAACAACG | AATCGGACGGGAAAGCCATT | Start: 567 |
| Tm | 60.038 | 60.034 | End: 738 |
| Size | 20 | 20 | 172 |
| Primer 5 details |
|---|
| Sequence | CTCCTTTTCTCCCATGGCGT | CGTTGTTGAGCCAATTGGGG | Start: 357 |
| Tm | 60.035 | 60.038 | End: 586 |
| Size | 20 | 20 | 230 |
(CGA)5: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CCAATTGGCTCAACAACGCA | AATCGGACGGGAAAGCCATT | Start: 569 |
| Tm | 59.968 | 60.034 | End: 738 |
| Size | 20 | 20 | 170 |
| Primer 2 details |
|---|
| Sequence | CTCCTTTTCTCCCATGGCGT | TGCGTTGTTGAGCCAATTGG | Start: 357 |
| Tm | 60.035 | 59.968 | End: 588 |
| Size | 20 | 20 | 232 |
| Primer 3 details |
|---|
| Sequence | AGGAGTTTCACCTGGCGAAG | GTTCTTGCCTGACCCTCTCC | Start: 2699 |
| Tm | 59.965 | 60.036 | End: 2874 |
| Size | 20 | 20 | 176 |
| Primer 4 details |
|---|
| Sequence | CCCCAATTGGCTCAACAACG | AATCGGACGGGAAAGCCATT | Start: 567 |
| Tm | 60.038 | 60.034 | End: 738 |
| Size | 20 | 20 | 172 |
| Primer 5 details |
|---|
| Sequence | CTCCTTTTCTCCCATGGCGT | CGTTGTTGAGCCAATTGGGG | Start: 357 |
| Tm | 60.035 | 60.038 | End: 586 |
| Size | 20 | 20 | 230 |
(T)10c(T)23: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CCAATTGGCTCAACAACGCA | AATCGGACGGGAAAGCCATT | Start: 569 |
| Tm | 59.968 | 60.034 | End: 738 |
| Size | 20 | 20 | 170 |
| Primer 2 details |
|---|
| Sequence | CTCCTTTTCTCCCATGGCGT | TGCGTTGTTGAGCCAATTGG | Start: 357 |
| Tm | 60.035 | 59.968 | End: 588 |
| Size | 20 | 20 | 232 |
| Primer 3 details |
|---|
| Sequence | AGGAGTTTCACCTGGCGAAG | GTTCTTGCCTGACCCTCTCC | Start: 2699 |
| Tm | 59.965 | 60.036 | End: 2874 |
| Size | 20 | 20 | 176 |
| Primer 4 details |
|---|
| Sequence | CCCCAATTGGCTCAACAACG | AATCGGACGGGAAAGCCATT | Start: 567 |
| Tm | 60.038 | 60.034 | End: 738 |
| Size | 20 | 20 | 172 |
| Primer 5 details |
|---|
| Sequence | CTCCTTTTCTCCCATGGCGT | CGTTGTTGAGCCAATTGGGG | Start: 357 |
| Tm | 60.035 | 60.038 | End: 586 |
| Size | 20 | 20 | 230 |
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