ssr_primer
Primer Details for TRINITY_DN11498_c2_g1_i4 |
|---|
| (TAA)5: Primer 1 details |
|---|
| Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CGAATCGGAATGCTGCCAAG | AAAATGGTGGCGCATTGCTT | Start: 3902 |
| Tm | 59.971 | 59.965 | End: 4078 |
| Size | 20 | 20 | 177 |
| Primer 2 details |
|---|
| Sequence | ATCGGAAGCACTCAACAGCA | CTTGGCAGCATTCCGATTCG | Start: 3669 |
| Tm | 59.965 | 59.971 | End: 3921 |
| Size | 20 | 20 | 253 |
| Primer 3 details |
|---|
| Sequence | ATCAGTTCAGTGCAGGTCGG | TTGTTGCGGAAGGAAAAGCG | Start: 2353 |
| Tm | 60.037 | 59.97 | End: 2477 |
| Size | 20 | 20 | 125 |
| Primer 4 details |
|---|
| Sequence | GGCGCCGTTCATCCATTAAC | ATGTGGTCGGCTTGTGGAAT | Start: 4431 |
| Tm | 59.971 | 59.962 | End: 4562 |
| Size | 20 | 20 | 132 |
| Primer 5 details |
|---|
| Sequence | GGAAGCACTCAACAGCAAGC | CTTGGCAGCATTCCGATTCG | Start: 3672 |
| Tm | 60.04 | 59.971 | End: 3921 |
| Size | 20 | 20 | 250 |
(AT)8: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CGAATCGGAATGCTGCCAAG | AAAATGGTGGCGCATTGCTT | Start: 3902 |
| Tm | 59.971 | 59.965 | End: 4078 |
| Size | 20 | 20 | 177 |
| Primer 2 details |
|---|
| Sequence | ATCGGAAGCACTCAACAGCA | CTTGGCAGCATTCCGATTCG | Start: 3669 |
| Tm | 59.965 | 59.971 | End: 3921 |
| Size | 20 | 20 | 253 |
| Primer 3 details |
|---|
| Sequence | ATCAGTTCAGTGCAGGTCGG | TTGTTGCGGAAGGAAAAGCG | Start: 2353 |
| Tm | 60.037 | 59.97 | End: 2477 |
| Size | 20 | 20 | 125 |
| Primer 4 details |
|---|
| Sequence | GGCGCCGTTCATCCATTAAC | ATGTGGTCGGCTTGTGGAAT | Start: 4431 |
| Tm | 59.971 | 59.962 | End: 4562 |
| Size | 20 | 20 | 132 |
| Primer 5 details |
|---|
| Sequence | GGAAGCACTCAACAGCAAGC | CTTGGCAGCATTCCGATTCG | Start: 3672 |
| Tm | 60.04 | 59.971 | End: 3921 |
| Size | 20 | 20 | 250 |
(A)10: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CGAATCGGAATGCTGCCAAG | AAAATGGTGGCGCATTGCTT | Start: 3902 |
| Tm | 59.971 | 59.965 | End: 4078 |
| Size | 20 | 20 | 177 |
| Primer 2 details |
|---|
| Sequence | ATCGGAAGCACTCAACAGCA | CTTGGCAGCATTCCGATTCG | Start: 3669 |
| Tm | 59.965 | 59.971 | End: 3921 |
| Size | 20 | 20 | 253 |
| Primer 3 details |
|---|
| Sequence | ATCAGTTCAGTGCAGGTCGG | TTGTTGCGGAAGGAAAAGCG | Start: 2353 |
| Tm | 60.037 | 59.97 | End: 2477 |
| Size | 20 | 20 | 125 |
| Primer 4 details |
|---|
| Sequence | GGCGCCGTTCATCCATTAAC | ATGTGGTCGGCTTGTGGAAT | Start: 4431 |
| Tm | 59.971 | 59.962 | End: 4562 |
| Size | 20 | 20 | 132 |
| Primer 5 details |
|---|
| Sequence | GGAAGCACTCAACAGCAAGC | CTTGGCAGCATTCCGATTCG | Start: 3672 |
| Tm | 60.04 | 59.971 | End: 3921 |
| Size | 20 | 20 | 250 |
(TA)6: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CGAATCGGAATGCTGCCAAG | AAAATGGTGGCGCATTGCTT | Start: 3902 |
| Tm | 59.971 | 59.965 | End: 4078 |
| Size | 20 | 20 | 177 |
| Primer 2 details |
|---|
| Sequence | ATCGGAAGCACTCAACAGCA | CTTGGCAGCATTCCGATTCG | Start: 3669 |
| Tm | 59.965 | 59.971 | End: 3921 |
| Size | 20 | 20 | 253 |
| Primer 3 details |
|---|
| Sequence | ATCAGTTCAGTGCAGGTCGG | TTGTTGCGGAAGGAAAAGCG | Start: 2353 |
| Tm | 60.037 | 59.97 | End: 2477 |
| Size | 20 | 20 | 125 |
| Primer 4 details |
|---|
| Sequence | GGCGCCGTTCATCCATTAAC | ATGTGGTCGGCTTGTGGAAT | Start: 4431 |
| Tm | 59.971 | 59.962 | End: 4562 |
| Size | 20 | 20 | 132 |
| Primer 5 details |
|---|
| Sequence | GGAAGCACTCAACAGCAAGC | CTTGGCAGCATTCCGATTCG | Start: 3672 |
| Tm | 60.04 | 59.971 | End: 3921 |
| Size | 20 | 20 | 250 |
(AGA)5: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CGAATCGGAATGCTGCCAAG | AAAATGGTGGCGCATTGCTT | Start: 3902 |
| Tm | 59.971 | 59.965 | End: 4078 |
| Size | 20 | 20 | 177 |
| Primer 2 details |
|---|
| Sequence | ATCGGAAGCACTCAACAGCA | CTTGGCAGCATTCCGATTCG | Start: 3669 |
| Tm | 59.965 | 59.971 | End: 3921 |
| Size | 20 | 20 | 253 |
| Primer 3 details |
|---|
| Sequence | ATCAGTTCAGTGCAGGTCGG | TTGTTGCGGAAGGAAAAGCG | Start: 2353 |
| Tm | 60.037 | 59.97 | End: 2477 |
| Size | 20 | 20 | 125 |
| Primer 4 details |
|---|
| Sequence | GGCGCCGTTCATCCATTAAC | ATGTGGTCGGCTTGTGGAAT | Start: 4431 |
| Tm | 59.971 | 59.962 | End: 4562 |
| Size | 20 | 20 | 132 |
| Primer 5 details |
|---|
| Sequence | GGAAGCACTCAACAGCAAGC | CTTGGCAGCATTCCGATTCG | Start: 3672 |
| Tm | 60.04 | 59.971 | End: 3921 |
| Size | 20 | 20 | 250 |
(TG)7: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CGAATCGGAATGCTGCCAAG | AAAATGGTGGCGCATTGCTT | Start: 3902 |
| Tm | 59.971 | 59.965 | End: 4078 |
| Size | 20 | 20 | 177 |
| Primer 2 details |
|---|
| Sequence | ATCGGAAGCACTCAACAGCA | CTTGGCAGCATTCCGATTCG | Start: 3669 |
| Tm | 59.965 | 59.971 | End: 3921 |
| Size | 20 | 20 | 253 |
| Primer 3 details |
|---|
| Sequence | ATCAGTTCAGTGCAGGTCGG | TTGTTGCGGAAGGAAAAGCG | Start: 2353 |
| Tm | 60.037 | 59.97 | End: 2477 |
| Size | 20 | 20 | 125 |
| Primer 4 details |
|---|
| Sequence | GGCGCCGTTCATCCATTAAC | ATGTGGTCGGCTTGTGGAAT | Start: 4431 |
| Tm | 59.971 | 59.962 | End: 4562 |
| Size | 20 | 20 | 132 |
| Primer 5 details |
|---|
| Sequence | GGAAGCACTCAACAGCAAGC | CTTGGCAGCATTCCGATTCG | Start: 3672 |
| Tm | 60.04 | 59.971 | End: 3921 |
| Size | 20 | 20 | 250 |
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