ssr_primer
Primer Details for TRINITY_DN12390_c1_g1_i9 |
|---|
| (T)17: Primer 1 details |
|---|
| Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | GAACTTGGTTCTCCGCCAGA | CTGCTCTATCGTCGCGGAAT | Start: 4519 |
| Tm | 59.965 | 60.04 | End: 4623 |
| Size | 20 | 20 | 105 |
| Primer 2 details |
|---|
| Sequence | ACTTGGTTCTCCGCCAGAAG | CTGCTCTATCGTCGCGGAAT | Start: 4521 |
| Tm | 59.965 | 60.04 | End: 4623 |
| Size | 20 | 20 | 103 |
| Primer 3 details |
|---|
| Sequence | AGAACGATCGAGCGAGCAAT | TGTGTGCCGTTTCCTCTCTC | Start: 3914 |
| Tm | 59.899 | 59.966 | End: 4017 |
| Size | 20 | 20 | 104 |
| Primer 4 details |
|---|
| Sequence | AGAACGATCGAGCGAGCAAT | GGTTTTGAGGAGGGATCGCA | Start: 3914 |
| Tm | 59.899 | 60.035 | End: 4067 |
| Size | 20 | 20 | 154 |
| Primer 5 details |
|---|
| Sequence | AACTGCCAAAAACCACTCGC | TCTGGCGGAGAACCAAGTTC | Start: 4260 |
| Tm | 59.898 | 59.965 | End: 4538 |
| Size | 20 | 20 | 279 |
(GA)6: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | GAACTTGGTTCTCCGCCAGA | CTGCTCTATCGTCGCGGAAT | Start: 4519 |
| Tm | 59.965 | 60.04 | End: 4623 |
| Size | 20 | 20 | 105 |
| Primer 2 details |
|---|
| Sequence | ACTTGGTTCTCCGCCAGAAG | CTGCTCTATCGTCGCGGAAT | Start: 4521 |
| Tm | 59.965 | 60.04 | End: 4623 |
| Size | 20 | 20 | 103 |
| Primer 3 details |
|---|
| Sequence | AGAACGATCGAGCGAGCAAT | TGTGTGCCGTTTCCTCTCTC | Start: 3914 |
| Tm | 59.899 | 59.966 | End: 4017 |
| Size | 20 | 20 | 104 |
| Primer 4 details |
|---|
| Sequence | AGAACGATCGAGCGAGCAAT | GGTTTTGAGGAGGGATCGCA | Start: 3914 |
| Tm | 59.899 | 60.035 | End: 4067 |
| Size | 20 | 20 | 154 |
| Primer 5 details |
|---|
| Sequence | AACTGCCAAAAACCACTCGC | TCTGGCGGAGAACCAAGTTC | Start: 4260 |
| Tm | 59.898 | 59.965 | End: 4538 |
| Size | 20 | 20 | 279 |
(AT)6: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | GAACTTGGTTCTCCGCCAGA | CTGCTCTATCGTCGCGGAAT | Start: 4519 |
| Tm | 59.965 | 60.04 | End: 4623 |
| Size | 20 | 20 | 105 |
| Primer 2 details |
|---|
| Sequence | ACTTGGTTCTCCGCCAGAAG | CTGCTCTATCGTCGCGGAAT | Start: 4521 |
| Tm | 59.965 | 60.04 | End: 4623 |
| Size | 20 | 20 | 103 |
| Primer 3 details |
|---|
| Sequence | AGAACGATCGAGCGAGCAAT | TGTGTGCCGTTTCCTCTCTC | Start: 3914 |
| Tm | 59.899 | 59.966 | End: 4017 |
| Size | 20 | 20 | 104 |
| Primer 4 details |
|---|
| Sequence | AGAACGATCGAGCGAGCAAT | GGTTTTGAGGAGGGATCGCA | Start: 3914 |
| Tm | 59.899 | 60.035 | End: 4067 |
| Size | 20 | 20 | 154 |
| Primer 5 details |
|---|
| Sequence | AACTGCCAAAAACCACTCGC | TCTGGCGGAGAACCAAGTTC | Start: 4260 |
| Tm | 59.898 | 59.965 | End: 4538 |
| Size | 20 | 20 | 279 |
(AG)8gaaacggcacacaccaaagagaaggaatcccgggcaatccccgtgcgatccctcctcaaaacccaaaaaac(T)10: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | GAACTTGGTTCTCCGCCAGA | CTGCTCTATCGTCGCGGAAT | Start: 4519 |
| Tm | 59.965 | 60.04 | End: 4623 |
| Size | 20 | 20 | 105 |
| Primer 2 details |
|---|
| Sequence | ACTTGGTTCTCCGCCAGAAG | CTGCTCTATCGTCGCGGAAT | Start: 4521 |
| Tm | 59.965 | 60.04 | End: 4623 |
| Size | 20 | 20 | 103 |
| Primer 3 details |
|---|
| Sequence | AGAACGATCGAGCGAGCAAT | TGTGTGCCGTTTCCTCTCTC | Start: 3914 |
| Tm | 59.899 | 59.966 | End: 4017 |
| Size | 20 | 20 | 104 |
| Primer 4 details |
|---|
| Sequence | AGAACGATCGAGCGAGCAAT | GGTTTTGAGGAGGGATCGCA | Start: 3914 |
| Tm | 59.899 | 60.035 | End: 4067 |
| Size | 20 | 20 | 154 |
| Primer 5 details |
|---|
| Sequence | AACTGCCAAAAACCACTCGC | TCTGGCGGAGAACCAAGTTC | Start: 4260 |
| Tm | 59.898 | 59.965 | End: 4538 |
| Size | 20 | 20 | 279 |
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