ssr_primer
Primer Details for TRINITY_DN12102_c0_g2_i9 |
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| (A)17ttatccactagccctagagaggaaaatattttggaagattggtgatttaattttg(A)11: Primer 1 details |
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| Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CCGACCGTCGATAACTGGAG | CCCTTCCCCCTTCTCCCTTA | Start: 2110 |
| Tm | 59.971 | 59.954 | End: 2258 |
| Size | 20 | 20 | 149 |
| Primer 2 details |
|---|
| Sequence | CTCCGACCGTCGATAACTGG | CCCTTCCCCCTTCTCCCTTA | Start: 2108 |
| Tm | 59.971 | 59.954 | End: 2258 |
| Size | 20 | 20 | 151 |
| Primer 3 details |
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| Sequence | ACAAGCTCTCATGGCAGCAT | CCCTTCCCCCTTCTCCCTTA | Start: 2140 |
| Tm | 60.034 | 59.954 | End: 2258 |
| Size | 20 | 20 | 119 |
| Primer 4 details |
|---|
| Sequence | ACAAGCTCTCATGGCAGCAT | GGTGGTTTGGCTTGGGAAAC | Start: 2140 |
| Tm | 60.034 | 59.894 | End: 2411 |
| Size | 20 | 20 | 272 |
| Primer 5 details |
|---|
| Sequence | GAGGGACTTTGAGGTCGACG | TCCAATTCGGGGAAGGAAGC | Start: 1234 |
| Tm | 60.109 | 60.034 | End: 1511 |
| Size | 20 | 20 | 278 |
(T)13ggaaaaatg(T)13: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CCGACCGTCGATAACTGGAG | CCCTTCCCCCTTCTCCCTTA | Start: 2110 |
| Tm | 59.971 | 59.954 | End: 2258 |
| Size | 20 | 20 | 149 |
| Primer 2 details |
|---|
| Sequence | CTCCGACCGTCGATAACTGG | CCCTTCCCCCTTCTCCCTTA | Start: 2108 |
| Tm | 59.971 | 59.954 | End: 2258 |
| Size | 20 | 20 | 151 |
| Primer 3 details |
|---|
| Sequence | ACAAGCTCTCATGGCAGCAT | CCCTTCCCCCTTCTCCCTTA | Start: 2140 |
| Tm | 60.034 | 59.954 | End: 2258 |
| Size | 20 | 20 | 119 |
| Primer 4 details |
|---|
| Sequence | ACAAGCTCTCATGGCAGCAT | GGTGGTTTGGCTTGGGAAAC | Start: 2140 |
| Tm | 60.034 | 59.894 | End: 2411 |
| Size | 20 | 20 | 272 |
| Primer 5 details |
|---|
| Sequence | GAGGGACTTTGAGGTCGACG | TCCAATTCGGGGAAGGAAGC | Start: 1234 |
| Tm | 60.109 | 60.034 | End: 1511 |
| Size | 20 | 20 | 278 |
(TCC)5: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CCGACCGTCGATAACTGGAG | CCCTTCCCCCTTCTCCCTTA | Start: 2110 |
| Tm | 59.971 | 59.954 | End: 2258 |
| Size | 20 | 20 | 149 |
| Primer 2 details |
|---|
| Sequence | CTCCGACCGTCGATAACTGG | CCCTTCCCCCTTCTCCCTTA | Start: 2108 |
| Tm | 59.971 | 59.954 | End: 2258 |
| Size | 20 | 20 | 151 |
| Primer 3 details |
|---|
| Sequence | ACAAGCTCTCATGGCAGCAT | CCCTTCCCCCTTCTCCCTTA | Start: 2140 |
| Tm | 60.034 | 59.954 | End: 2258 |
| Size | 20 | 20 | 119 |
| Primer 4 details |
|---|
| Sequence | ACAAGCTCTCATGGCAGCAT | GGTGGTTTGGCTTGGGAAAC | Start: 2140 |
| Tm | 60.034 | 59.894 | End: 2411 |
| Size | 20 | 20 | 272 |
| Primer 5 details |
|---|
| Sequence | GAGGGACTTTGAGGTCGACG | TCCAATTCGGGGAAGGAAGC | Start: 1234 |
| Tm | 60.109 | 60.034 | End: 1511 |
| Size | 20 | 20 | 278 |
(GAA)8: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CCGACCGTCGATAACTGGAG | CCCTTCCCCCTTCTCCCTTA | Start: 2110 |
| Tm | 59.971 | 59.954 | End: 2258 |
| Size | 20 | 20 | 149 |
| Primer 2 details |
|---|
| Sequence | CTCCGACCGTCGATAACTGG | CCCTTCCCCCTTCTCCCTTA | Start: 2108 |
| Tm | 59.971 | 59.954 | End: 2258 |
| Size | 20 | 20 | 151 |
| Primer 3 details |
|---|
| Sequence | ACAAGCTCTCATGGCAGCAT | CCCTTCCCCCTTCTCCCTTA | Start: 2140 |
| Tm | 60.034 | 59.954 | End: 2258 |
| Size | 20 | 20 | 119 |
| Primer 4 details |
|---|
| Sequence | ACAAGCTCTCATGGCAGCAT | GGTGGTTTGGCTTGGGAAAC | Start: 2140 |
| Tm | 60.034 | 59.894 | End: 2411 |
| Size | 20 | 20 | 272 |
| Primer 5 details |
|---|
| Sequence | GAGGGACTTTGAGGTCGACG | TCCAATTCGGGGAAGGAAGC | Start: 1234 |
| Tm | 60.109 | 60.034 | End: 1511 |
| Size | 20 | 20 | 278 |
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