ssr_primer
Primer Details for TRINITY_DN11579_c2_g2_i3 |
|---|
| (A)12tccctttcggatatggatctcttcgctgccaatgtcaagaa(CGC)6: Primer 1 details |
|---|
| Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | GACTGGCTGTGTGCTTGTTG | CTGAGGGTGTCTGCTTCCAG | Start: 3952 |
| Tm | 59.97 | 60.037 | End: 4051 |
| Size | 20 | 20 | 100 |
| Primer 2 details |
|---|
| Sequence | TCCTATGCCTGAGACTGGCT | CTGAGGGTGTCTGCTTCCAG | Start: 3940 |
| Tm | 60.032 | 60.037 | End: 4051 |
| Size | 20 | 20 | 112 |
| Primer 3 details |
|---|
| Sequence | GACTGGCTGTGTGCTTGTTG | GCAAAAACATGCTCGCCTCA | Start: 3952 |
| Tm | 59.97 | 60.039 | End: 4193 |
| Size | 20 | 20 | 242 |
| Primer 4 details |
|---|
| Sequence | TCCTATGCCTGAGACTGGCT | GCAAAAACATGCTCGCCTCA | Start: 3940 |
| Tm | 60.032 | 60.039 | End: 4193 |
| Size | 20 | 20 | 254 |
| Primer 5 details |
|---|
| Sequence | CTGGAAGCAGACACCCTCAG | GCAAAAACATGCTCGCCTCA | Start: 4032 |
| Tm | 60.037 | 60.039 | End: 4193 |
| Size | 20 | 20 | 162 |
(ATT)5tt(A)10: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | GACTGGCTGTGTGCTTGTTG | CTGAGGGTGTCTGCTTCCAG | Start: 3952 |
| Tm | 59.97 | 60.037 | End: 4051 |
| Size | 20 | 20 | 100 |
| Primer 2 details |
|---|
| Sequence | TCCTATGCCTGAGACTGGCT | CTGAGGGTGTCTGCTTCCAG | Start: 3940 |
| Tm | 60.032 | 60.037 | End: 4051 |
| Size | 20 | 20 | 112 |
| Primer 3 details |
|---|
| Sequence | GACTGGCTGTGTGCTTGTTG | GCAAAAACATGCTCGCCTCA | Start: 3952 |
| Tm | 59.97 | 60.039 | End: 4193 |
| Size | 20 | 20 | 242 |
| Primer 4 details |
|---|
| Sequence | TCCTATGCCTGAGACTGGCT | GCAAAAACATGCTCGCCTCA | Start: 3940 |
| Tm | 60.032 | 60.039 | End: 4193 |
| Size | 20 | 20 | 254 |
| Primer 5 details |
|---|
| Sequence | CTGGAAGCAGACACCCTCAG | GCAAAAACATGCTCGCCTCA | Start: 4032 |
| Tm | 60.037 | 60.039 | End: 4193 |
| Size | 20 | 20 | 162 |
(TTC)5: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | GACTGGCTGTGTGCTTGTTG | CTGAGGGTGTCTGCTTCCAG | Start: 3952 |
| Tm | 59.97 | 60.037 | End: 4051 |
| Size | 20 | 20 | 100 |
| Primer 2 details |
|---|
| Sequence | TCCTATGCCTGAGACTGGCT | CTGAGGGTGTCTGCTTCCAG | Start: 3940 |
| Tm | 60.032 | 60.037 | End: 4051 |
| Size | 20 | 20 | 112 |
| Primer 3 details |
|---|
| Sequence | GACTGGCTGTGTGCTTGTTG | GCAAAAACATGCTCGCCTCA | Start: 3952 |
| Tm | 59.97 | 60.039 | End: 4193 |
| Size | 20 | 20 | 242 |
| Primer 4 details |
|---|
| Sequence | TCCTATGCCTGAGACTGGCT | GCAAAAACATGCTCGCCTCA | Start: 3940 |
| Tm | 60.032 | 60.039 | End: 4193 |
| Size | 20 | 20 | 254 |
| Primer 5 details |
|---|
| Sequence | CTGGAAGCAGACACCCTCAG | GCAAAAACATGCTCGCCTCA | Start: 4032 |
| Tm | 60.037 | 60.039 | End: 4193 |
| Size | 20 | 20 | 162 |
(T)10: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | GACTGGCTGTGTGCTTGTTG | CTGAGGGTGTCTGCTTCCAG | Start: 3952 |
| Tm | 59.97 | 60.037 | End: 4051 |
| Size | 20 | 20 | 100 |
| Primer 2 details |
|---|
| Sequence | TCCTATGCCTGAGACTGGCT | CTGAGGGTGTCTGCTTCCAG | Start: 3940 |
| Tm | 60.032 | 60.037 | End: 4051 |
| Size | 20 | 20 | 112 |
| Primer 3 details |
|---|
| Sequence | GACTGGCTGTGTGCTTGTTG | GCAAAAACATGCTCGCCTCA | Start: 3952 |
| Tm | 59.97 | 60.039 | End: 4193 |
| Size | 20 | 20 | 242 |
| Primer 4 details |
|---|
| Sequence | TCCTATGCCTGAGACTGGCT | GCAAAAACATGCTCGCCTCA | Start: 3940 |
| Tm | 60.032 | 60.039 | End: 4193 |
| Size | 20 | 20 | 254 |
| Primer 5 details |
|---|
| Sequence | CTGGAAGCAGACACCCTCAG | GCAAAAACATGCTCGCCTCA | Start: 4032 |
| Tm | 60.037 | 60.039 | End: 4193 |
| Size | 20 | 20 | 162 |
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