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CsExSLDb: Transcriptome based Cucumis sativus Extended Shelf Life Database

ssr_primer

Primer Details for TRINITY_DN12790_c0_g2_i18

(A)10: Primer 1 details
Primer CharacteristicsForward PrimerReverse PrimerProduct Details
SequenceACCCAACTTGCCACCTGAAAGCGCTGGCTTTCAGTTGAAAStart: 6063
Tm60.03359.969End: 6317
Size2020255
Primer 2 details
SequenceCGGAATCGTGGTCTCTCGAGTCTTGTGACCCCCGTTAAGCStart: 344
Tm59.97259.964End: 593
Size2020250
Primer 3 details
SequenceTTACGCTCCACAGCTCCAAGCTCGAGAGACCACGATTCCGStart: 257
Tm60.03759.972End: 363
Size2020107
Primer 4 details
SequenceCGGAATCGTGGTCTCTCGAGTGGATTTCTTGTGACCCCCGStart: 344
Tm59.97259.962End: 599
Size2020256
Primer 5 details
SequenceCGGAATCGTGGTCTCTCGAGGGATTTCTTGTGACCCCCGTStart: 344
Tm59.97259.962End: 598
Size2020255
(A)27: Primer 1 details
Primer CharacteristicsForward PrimerReverse PrimerProduct Details
SequenceACCCAACTTGCCACCTGAAAGCGCTGGCTTTCAGTTGAAAStart: 6063
Tm60.03359.969End: 6317
Size2020255
Primer 2 details
SequenceCGGAATCGTGGTCTCTCGAGTCTTGTGACCCCCGTTAAGCStart: 344
Tm59.97259.964End: 593
Size2020250
Primer 3 details
SequenceTTACGCTCCACAGCTCCAAGCTCGAGAGACCACGATTCCGStart: 257
Tm60.03759.972End: 363
Size2020107
Primer 4 details
SequenceCGGAATCGTGGTCTCTCGAGTGGATTTCTTGTGACCCCCGStart: 344
Tm59.97259.962End: 599
Size2020256
Primer 5 details
SequenceCGGAATCGTGGTCTCTCGAGGGATTTCTTGTGACCCCCGTStart: 344
Tm59.97259.962End: 598
Size2020255
(A)11: Primer 1 details
Primer CharacteristicsForward PrimerReverse PrimerProduct Details
SequenceACCCAACTTGCCACCTGAAAGCGCTGGCTTTCAGTTGAAAStart: 6063
Tm60.03359.969End: 6317
Size2020255
Primer 2 details
SequenceCGGAATCGTGGTCTCTCGAGTCTTGTGACCCCCGTTAAGCStart: 344
Tm59.97259.964End: 593
Size2020250
Primer 3 details
SequenceTTACGCTCCACAGCTCCAAGCTCGAGAGACCACGATTCCGStart: 257
Tm60.03759.972End: 363
Size2020107
Primer 4 details
SequenceCGGAATCGTGGTCTCTCGAGTGGATTTCTTGTGACCCCCGStart: 344
Tm59.97259.962End: 599
Size2020256
Primer 5 details
SequenceCGGAATCGTGGTCTCTCGAGGGATTTCTTGTGACCCCCGTStart: 344
Tm59.97259.962End: 598
Size2020255
(A)11: Primer 1 details
Primer CharacteristicsForward PrimerReverse PrimerProduct Details
SequenceACCCAACTTGCCACCTGAAAGCGCTGGCTTTCAGTTGAAAStart: 6063
Tm60.03359.969End: 6317
Size2020255
Primer 2 details
SequenceCGGAATCGTGGTCTCTCGAGTCTTGTGACCCCCGTTAAGCStart: 344
Tm59.97259.964End: 593
Size2020250
Primer 3 details
SequenceTTACGCTCCACAGCTCCAAGCTCGAGAGACCACGATTCCGStart: 257
Tm60.03759.972End: 363
Size2020107
Primer 4 details
SequenceCGGAATCGTGGTCTCTCGAGTGGATTTCTTGTGACCCCCGStart: 344
Tm59.97259.962End: 599
Size2020256
Primer 5 details
SequenceCGGAATCGTGGTCTCTCGAGGGATTTCTTGTGACCCCCGTStart: 344
Tm59.97259.962End: 598
Size2020255
(T)12: Primer 1 details
Primer CharacteristicsForward PrimerReverse PrimerProduct Details
SequenceACCCAACTTGCCACCTGAAAGCGCTGGCTTTCAGTTGAAAStart: 6063
Tm60.03359.969End: 6317
Size2020255
Primer 2 details
SequenceCGGAATCGTGGTCTCTCGAGTCTTGTGACCCCCGTTAAGCStart: 344
Tm59.97259.964End: 593
Size2020250
Primer 3 details
SequenceTTACGCTCCACAGCTCCAAGCTCGAGAGACCACGATTCCGStart: 257
Tm60.03759.972End: 363
Size2020107
Primer 4 details
SequenceCGGAATCGTGGTCTCTCGAGTGGATTTCTTGTGACCCCCGStart: 344
Tm59.97259.962End: 599
Size2020256
Primer 5 details
SequenceCGGAATCGTGGTCTCTCGAGGGATTTCTTGTGACCCCCGTStart: 344
Tm59.97259.962End: 598
Size2020255

ICAR Data Use Licence