ssr_primer
Primer Details for TRINITY_DN12489_c3_g2_i2 |
|---|
| (T)10ctttaaataccaacaaaccccatttcccaattttcttcaaaattccctcatctaatctcatctcatcttcttcccaccaaacc(A)13: Primer 1 details |
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| Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CACGAGACTGGAAGGGCAAT | ACTTCGTTCATCGTTGGCCT | Start: 1675 |
| Tm | 60.036 | 59.965 | End: 1782 |
| Size | 20 | 20 | 108 |
| Primer 2 details |
|---|
| Sequence | CACGAGACTGGAAGGGCAAT | TCATCGTTGGCCTCTGCTTT | Start: 1675 |
| Tm | 60.036 | 59.963 | End: 1775 |
| Size | 20 | 20 | 101 |
| Primer 3 details |
|---|
| Sequence | CACGAGACTGGAAGGGCAAT | TTCATCGTTGGCCTCTGCTT | Start: 1675 |
| Tm | 60.036 | 59.963 | End: 1776 |
| Size | 20 | 20 | 102 |
| Primer 4 details |
|---|
| Sequence | GAGCAAGAAAAGCGGCAACA | GCGATCTAGAACGTCGGTGT | Start: 1707 |
| Tm | 59.969 | 59.902 | End: 1919 |
| Size | 20 | 20 | 213 |
| Primer 5 details |
|---|
| Sequence | GAGCAAGAAAAGCGGCAACA | CCGTCAATGGTGAATTCGGC | Start: 1707 |
| Tm | 59.969 | 59.901 | End: 1937 |
| Size | 20 | 20 | 231 |
(AAT)5: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CACGAGACTGGAAGGGCAAT | ACTTCGTTCATCGTTGGCCT | Start: 1675 |
| Tm | 60.036 | 59.965 | End: 1782 |
| Size | 20 | 20 | 108 |
| Primer 2 details |
|---|
| Sequence | CACGAGACTGGAAGGGCAAT | TCATCGTTGGCCTCTGCTTT | Start: 1675 |
| Tm | 60.036 | 59.963 | End: 1775 |
| Size | 20 | 20 | 101 |
| Primer 3 details |
|---|
| Sequence | CACGAGACTGGAAGGGCAAT | TTCATCGTTGGCCTCTGCTT | Start: 1675 |
| Tm | 60.036 | 59.963 | End: 1776 |
| Size | 20 | 20 | 102 |
| Primer 4 details |
|---|
| Sequence | GAGCAAGAAAAGCGGCAACA | GCGATCTAGAACGTCGGTGT | Start: 1707 |
| Tm | 59.969 | 59.902 | End: 1919 |
| Size | 20 | 20 | 213 |
| Primer 5 details |
|---|
| Sequence | GAGCAAGAAAAGCGGCAACA | CCGTCAATGGTGAATTCGGC | Start: 1707 |
| Tm | 59.969 | 59.901 | End: 1937 |
| Size | 20 | 20 | 231 |
(T)10: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CACGAGACTGGAAGGGCAAT | ACTTCGTTCATCGTTGGCCT | Start: 1675 |
| Tm | 60.036 | 59.965 | End: 1782 |
| Size | 20 | 20 | 108 |
| Primer 2 details |
|---|
| Sequence | CACGAGACTGGAAGGGCAAT | TCATCGTTGGCCTCTGCTTT | Start: 1675 |
| Tm | 60.036 | 59.963 | End: 1775 |
| Size | 20 | 20 | 101 |
| Primer 3 details |
|---|
| Sequence | CACGAGACTGGAAGGGCAAT | TTCATCGTTGGCCTCTGCTT | Start: 1675 |
| Tm | 60.036 | 59.963 | End: 1776 |
| Size | 20 | 20 | 102 |
| Primer 4 details |
|---|
| Sequence | GAGCAAGAAAAGCGGCAACA | GCGATCTAGAACGTCGGTGT | Start: 1707 |
| Tm | 59.969 | 59.902 | End: 1919 |
| Size | 20 | 20 | 213 |
| Primer 5 details |
|---|
| Sequence | GAGCAAGAAAAGCGGCAACA | CCGTCAATGGTGAATTCGGC | Start: 1707 |
| Tm | 59.969 | 59.901 | End: 1937 |
| Size | 20 | 20 | 231 |
(T)16: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CACGAGACTGGAAGGGCAAT | ACTTCGTTCATCGTTGGCCT | Start: 1675 |
| Tm | 60.036 | 59.965 | End: 1782 |
| Size | 20 | 20 | 108 |
| Primer 2 details |
|---|
| Sequence | CACGAGACTGGAAGGGCAAT | TCATCGTTGGCCTCTGCTTT | Start: 1675 |
| Tm | 60.036 | 59.963 | End: 1775 |
| Size | 20 | 20 | 101 |
| Primer 3 details |
|---|
| Sequence | CACGAGACTGGAAGGGCAAT | TTCATCGTTGGCCTCTGCTT | Start: 1675 |
| Tm | 60.036 | 59.963 | End: 1776 |
| Size | 20 | 20 | 102 |
| Primer 4 details |
|---|
| Sequence | GAGCAAGAAAAGCGGCAACA | GCGATCTAGAACGTCGGTGT | Start: 1707 |
| Tm | 59.969 | 59.902 | End: 1919 |
| Size | 20 | 20 | 213 |
| Primer 5 details |
|---|
| Sequence | GAGCAAGAAAAGCGGCAACA | CCGTCAATGGTGAATTCGGC | Start: 1707 |
| Tm | 59.969 | 59.901 | End: 1937 |
| Size | 20 | 20 | 231 |
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