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CsExSLDb: Transcriptome based Cucumis sativus Extended Shelf Life Database

ssr_primer

Primer Details for TRINITY_DN12719_c0_g6_i5

(CT)9: Primer 1 details
Primer CharacteristicsForward PrimerReverse PrimerProduct Details
SequenceGGAGTGCCACGCTTCTACTTCTTCCTTCTTGGGCCGGATTStart: 984
Tm60.03760.034End: 1181
Size2020198
Primer 2 details
SequenceAACTGGTGGCTGATGTGGAGCTTCCTTCTTGGGCCGGATTStart: 1077
Tm59.96360.034End: 1181
Size2020105
Primer 3 details
SequenceGGAGTGCCACGCTTCTACTTTCTTGGGCCGGATTAACACCStart: 984
Tm60.03760.035End: 1175
Size2020192
Primer 4 details
SequenceGGAGTGCCACGCTTCTACTTGGCCGGATTAACACCACAGAStart: 984
Tm60.03760.036End: 1170
Size2020187
Primer 5 details
SequenceGGAGTGCCACGCTTCTACTTCTCCACATCAGCCACCAGTTStart: 984
Tm60.03759.963End: 1096
Size2020113
(GGAAA)6: Primer 1 details
Primer CharacteristicsForward PrimerReverse PrimerProduct Details
SequenceGGAGTGCCACGCTTCTACTTCTTCCTTCTTGGGCCGGATTStart: 984
Tm60.03760.034End: 1181
Size2020198
Primer 2 details
SequenceAACTGGTGGCTGATGTGGAGCTTCCTTCTTGGGCCGGATTStart: 1077
Tm59.96360.034End: 1181
Size2020105
Primer 3 details
SequenceGGAGTGCCACGCTTCTACTTTCTTGGGCCGGATTAACACCStart: 984
Tm60.03760.035End: 1175
Size2020192
Primer 4 details
SequenceGGAGTGCCACGCTTCTACTTGGCCGGATTAACACCACAGAStart: 984
Tm60.03760.036End: 1170
Size2020187
Primer 5 details
SequenceGGAGTGCCACGCTTCTACTTCTCCACATCAGCCACCAGTTStart: 984
Tm60.03759.963End: 1096
Size2020113
(A)19: Primer 1 details
Primer CharacteristicsForward PrimerReverse PrimerProduct Details
SequenceGGAGTGCCACGCTTCTACTTCTTCCTTCTTGGGCCGGATTStart: 984
Tm60.03760.034End: 1181
Size2020198
Primer 2 details
SequenceAACTGGTGGCTGATGTGGAGCTTCCTTCTTGGGCCGGATTStart: 1077
Tm59.96360.034End: 1181
Size2020105
Primer 3 details
SequenceGGAGTGCCACGCTTCTACTTTCTTGGGCCGGATTAACACCStart: 984
Tm60.03760.035End: 1175
Size2020192
Primer 4 details
SequenceGGAGTGCCACGCTTCTACTTGGCCGGATTAACACCACAGAStart: 984
Tm60.03760.036End: 1170
Size2020187
Primer 5 details
SequenceGGAGTGCCACGCTTCTACTTCTCCACATCAGCCACCAGTTStart: 984
Tm60.03759.963End: 1096
Size2020113
(GAA)7: Primer 1 details
Primer CharacteristicsForward PrimerReverse PrimerProduct Details
SequenceGGAGTGCCACGCTTCTACTTCTTCCTTCTTGGGCCGGATTStart: 984
Tm60.03760.034End: 1181
Size2020198
Primer 2 details
SequenceAACTGGTGGCTGATGTGGAGCTTCCTTCTTGGGCCGGATTStart: 1077
Tm59.96360.034End: 1181
Size2020105
Primer 3 details
SequenceGGAGTGCCACGCTTCTACTTTCTTGGGCCGGATTAACACCStart: 984
Tm60.03760.035End: 1175
Size2020192
Primer 4 details
SequenceGGAGTGCCACGCTTCTACTTGGCCGGATTAACACCACAGAStart: 984
Tm60.03760.036End: 1170
Size2020187
Primer 5 details
SequenceGGAGTGCCACGCTTCTACTTCTCCACATCAGCCACCAGTTStart: 984
Tm60.03759.963End: 1096
Size2020113
(TC)6: Primer 1 details
Primer CharacteristicsForward PrimerReverse PrimerProduct Details
SequenceGGAGTGCCACGCTTCTACTTCTTCCTTCTTGGGCCGGATTStart: 984
Tm60.03760.034End: 1181
Size2020198
Primer 2 details
SequenceAACTGGTGGCTGATGTGGAGCTTCCTTCTTGGGCCGGATTStart: 1077
Tm59.96360.034End: 1181
Size2020105
Primer 3 details
SequenceGGAGTGCCACGCTTCTACTTTCTTGGGCCGGATTAACACCStart: 984
Tm60.03760.035End: 1175
Size2020192
Primer 4 details
SequenceGGAGTGCCACGCTTCTACTTGGCCGGATTAACACCACAGAStart: 984
Tm60.03760.036End: 1170
Size2020187
Primer 5 details
SequenceGGAGTGCCACGCTTCTACTTCTCCACATCAGCCACCAGTTStart: 984
Tm60.03759.963End: 1096
Size2020113

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