ssr_primer
Primer Details for TRINITY_DN12063_c2_g2_i13 |
|---|
| (CT)6: Primer 1 details |
|---|
| Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | TCTTGGGGGATTGAATGGGC | TGATCGCCTTCTTGAACCCC | Start: 2077 |
| Tm | 60.032 | 60.035 | End: 2247 |
| Size | 20 | 20 | 171 |
| Primer 2 details |
|---|
| Sequence | GGGAACAGGAATCTTGGGGG | TGATCGCCTTCTTGAACCCC | Start: 2066 |
| Tm | 60.033 | 60.035 | End: 2247 |
| Size | 20 | 20 | 182 |
| Primer 3 details |
|---|
| Sequence | AAAACTGGTGGTGGCCTCAA | AACGAGACTCGGGTGAGAGA | Start: 3686 |
| Tm | 60.033 | 59.964 | End: 3876 |
| Size | 20 | 20 | 191 |
| Primer 4 details |
|---|
| Sequence | AAAAACTGGTGGTGGCCTCA | AACGAGACTCGGGTGAGAGA | Start: 3685 |
| Tm | 60.033 | 59.964 | End: 3876 |
| Size | 20 | 20 | 192 |
| Primer 5 details |
|---|
| Sequence | TCTTGGGGGATTGAATGGGC | TGGGCTTTGATCGCCTTCTT | Start: 2077 |
| Tm | 60.032 | 59.962 | End: 2254 |
| Size | 20 | 20 | 178 |
(TCT)16tagctacaagaatccaaatctaaagaatatctctccccccaaaaaaaaatcaaattttta(ATC)5: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | TCTTGGGGGATTGAATGGGC | TGATCGCCTTCTTGAACCCC | Start: 2077 |
| Tm | 60.032 | 60.035 | End: 2247 |
| Size | 20 | 20 | 171 |
| Primer 2 details |
|---|
| Sequence | GGGAACAGGAATCTTGGGGG | TGATCGCCTTCTTGAACCCC | Start: 2066 |
| Tm | 60.033 | 60.035 | End: 2247 |
| Size | 20 | 20 | 182 |
| Primer 3 details |
|---|
| Sequence | AAAACTGGTGGTGGCCTCAA | AACGAGACTCGGGTGAGAGA | Start: 3686 |
| Tm | 60.033 | 59.964 | End: 3876 |
| Size | 20 | 20 | 191 |
| Primer 4 details |
|---|
| Sequence | AAAAACTGGTGGTGGCCTCA | AACGAGACTCGGGTGAGAGA | Start: 3685 |
| Tm | 60.033 | 59.964 | End: 3876 |
| Size | 20 | 20 | 192 |
| Primer 5 details |
|---|
| Sequence | TCTTGGGGGATTGAATGGGC | TGGGCTTTGATCGCCTTCTT | Start: 2077 |
| Tm | 60.032 | 59.962 | End: 2254 |
| Size | 20 | 20 | 178 |
(T)12ggagaaaatagaagaaatattctc(T)10: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | TCTTGGGGGATTGAATGGGC | TGATCGCCTTCTTGAACCCC | Start: 2077 |
| Tm | 60.032 | 60.035 | End: 2247 |
| Size | 20 | 20 | 171 |
| Primer 2 details |
|---|
| Sequence | GGGAACAGGAATCTTGGGGG | TGATCGCCTTCTTGAACCCC | Start: 2066 |
| Tm | 60.033 | 60.035 | End: 2247 |
| Size | 20 | 20 | 182 |
| Primer 3 details |
|---|
| Sequence | AAAACTGGTGGTGGCCTCAA | AACGAGACTCGGGTGAGAGA | Start: 3686 |
| Tm | 60.033 | 59.964 | End: 3876 |
| Size | 20 | 20 | 191 |
| Primer 4 details |
|---|
| Sequence | AAAAACTGGTGGTGGCCTCA | AACGAGACTCGGGTGAGAGA | Start: 3685 |
| Tm | 60.033 | 59.964 | End: 3876 |
| Size | 20 | 20 | 192 |
| Primer 5 details |
|---|
| Sequence | TCTTGGGGGATTGAATGGGC | TGGGCTTTGATCGCCTTCTT | Start: 2077 |
| Tm | 60.032 | 59.962 | End: 2254 |
| Size | 20 | 20 | 178 |
(A)11: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | TCTTGGGGGATTGAATGGGC | TGATCGCCTTCTTGAACCCC | Start: 2077 |
| Tm | 60.032 | 60.035 | End: 2247 |
| Size | 20 | 20 | 171 |
| Primer 2 details |
|---|
| Sequence | GGGAACAGGAATCTTGGGGG | TGATCGCCTTCTTGAACCCC | Start: 2066 |
| Tm | 60.033 | 60.035 | End: 2247 |
| Size | 20 | 20 | 182 |
| Primer 3 details |
|---|
| Sequence | AAAACTGGTGGTGGCCTCAA | AACGAGACTCGGGTGAGAGA | Start: 3686 |
| Tm | 60.033 | 59.964 | End: 3876 |
| Size | 20 | 20 | 191 |
| Primer 4 details |
|---|
| Sequence | AAAAACTGGTGGTGGCCTCA | AACGAGACTCGGGTGAGAGA | Start: 3685 |
| Tm | 60.033 | 59.964 | End: 3876 |
| Size | 20 | 20 | 192 |
| Primer 5 details |
|---|
| Sequence | TCTTGGGGGATTGAATGGGC | TGGGCTTTGATCGCCTTCTT | Start: 2077 |
| Tm | 60.032 | 59.962 | End: 2254 |
| Size | 20 | 20 | 178 |
(TC)6: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | TCTTGGGGGATTGAATGGGC | TGATCGCCTTCTTGAACCCC | Start: 2077 |
| Tm | 60.032 | 60.035 | End: 2247 |
| Size | 20 | 20 | 171 |
| Primer 2 details |
|---|
| Sequence | GGGAACAGGAATCTTGGGGG | TGATCGCCTTCTTGAACCCC | Start: 2066 |
| Tm | 60.033 | 60.035 | End: 2247 |
| Size | 20 | 20 | 182 |
| Primer 3 details |
|---|
| Sequence | AAAACTGGTGGTGGCCTCAA | AACGAGACTCGGGTGAGAGA | Start: 3686 |
| Tm | 60.033 | 59.964 | End: 3876 |
| Size | 20 | 20 | 191 |
| Primer 4 details |
|---|
| Sequence | AAAAACTGGTGGTGGCCTCA | AACGAGACTCGGGTGAGAGA | Start: 3685 |
| Tm | 60.033 | 59.964 | End: 3876 |
| Size | 20 | 20 | 192 |
| Primer 5 details |
|---|
| Sequence | TCTTGGGGGATTGAATGGGC | TGGGCTTTGATCGCCTTCTT | Start: 2077 |
| Tm | 60.032 | 59.962 | End: 2254 |
| Size | 20 | 20 | 178 |
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