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CsExSLDb: Transcriptome based Cucumis sativus Extended Shelf Life Database

ssr_primer

Primer Details for TRINITY_DN12383_c0_g5_i2

(T)10: Primer 1 details
Primer CharacteristicsForward PrimerReverse PrimerProduct Details
SequenceAAATGAGTTGTGGTGCACGCTGGGAAGATGCCTACTCGGAStart: 1578
Tm59.96960.033End: 1733
Size2020156
Primer 2 details
SequenceGCACCAAGTGTTTCCGGAACTCAAAGTCTGCTCCCGTGTCStart: 2974
Tm59.9759.966End: 3212
Size2020239
Primer 3 details
SequenceGCACCAAGTGTTTCCGGAACCAAAGTCTGCTCCCGTGTCTStart: 2974
Tm59.9759.966End: 3211
Size2020238
Primer 4 details
SequenceATGCATCACCAATCCTGCCATCAAAGTCTGCTCCCGTGTCStart: 2942
Tm60.03359.966End: 3212
Size2020271
Primer 5 details
SequenceATGCATCACCAATCCTGCCACAAAGTCTGCTCCCGTGTCTStart: 2942
Tm60.03359.966End: 3211
Size2020270
(AT)6: Primer 1 details
Primer CharacteristicsForward PrimerReverse PrimerProduct Details
SequenceAAATGAGTTGTGGTGCACGCTGGGAAGATGCCTACTCGGAStart: 1578
Tm59.96960.033End: 1733
Size2020156
Primer 2 details
SequenceGCACCAAGTGTTTCCGGAACTCAAAGTCTGCTCCCGTGTCStart: 2974
Tm59.9759.966End: 3212
Size2020239
Primer 3 details
SequenceGCACCAAGTGTTTCCGGAACCAAAGTCTGCTCCCGTGTCTStart: 2974
Tm59.9759.966End: 3211
Size2020238
Primer 4 details
SequenceATGCATCACCAATCCTGCCATCAAAGTCTGCTCCCGTGTCStart: 2942
Tm60.03359.966End: 3212
Size2020271
Primer 5 details
SequenceATGCATCACCAATCCTGCCACAAAGTCTGCTCCCGTGTCTStart: 2942
Tm60.03359.966End: 3211
Size2020270
(TG)6: Primer 1 details
Primer CharacteristicsForward PrimerReverse PrimerProduct Details
SequenceAAATGAGTTGTGGTGCACGCTGGGAAGATGCCTACTCGGAStart: 1578
Tm59.96960.033End: 1733
Size2020156
Primer 2 details
SequenceGCACCAAGTGTTTCCGGAACTCAAAGTCTGCTCCCGTGTCStart: 2974
Tm59.9759.966End: 3212
Size2020239
Primer 3 details
SequenceGCACCAAGTGTTTCCGGAACCAAAGTCTGCTCCCGTGTCTStart: 2974
Tm59.9759.966End: 3211
Size2020238
Primer 4 details
SequenceATGCATCACCAATCCTGCCATCAAAGTCTGCTCCCGTGTCStart: 2942
Tm60.03359.966End: 3212
Size2020271
Primer 5 details
SequenceATGCATCACCAATCCTGCCACAAAGTCTGCTCCCGTGTCTStart: 2942
Tm60.03359.966End: 3211
Size2020270
(A)16tagcaaggaaagaaaaaag(A)10: Primer 1 details
Primer CharacteristicsForward PrimerReverse PrimerProduct Details
SequenceAAATGAGTTGTGGTGCACGCTGGGAAGATGCCTACTCGGAStart: 1578
Tm59.96960.033End: 1733
Size2020156
Primer 2 details
SequenceGCACCAAGTGTTTCCGGAACTCAAAGTCTGCTCCCGTGTCStart: 2974
Tm59.9759.966End: 3212
Size2020239
Primer 3 details
SequenceGCACCAAGTGTTTCCGGAACCAAAGTCTGCTCCCGTGTCTStart: 2974
Tm59.9759.966End: 3211
Size2020238
Primer 4 details
SequenceATGCATCACCAATCCTGCCATCAAAGTCTGCTCCCGTGTCStart: 2942
Tm60.03359.966End: 3212
Size2020271
Primer 5 details
SequenceATGCATCACCAATCCTGCCACAAAGTCTGCTCCCGTGTCTStart: 2942
Tm60.03359.966End: 3211
Size2020270

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