ssr_primer
Primer Details for TRINITY_DN13090_c0_g1_i1 |
|---|
| (CT)8: Primer 1 details |
|---|
| Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | ACGGCGGAGTTAGGTTGAAG | TGGCGGAACTGGATCAGAAC | Start: 3851 |
| Tm | 60.038 | 60.036 | End: 3978 |
| Size | 20 | 20 | 128 |
| Primer 2 details |
|---|
| Sequence | GACGGCGGAGTTAGGTTGAA | TGGCGGAACTGGATCAGAAC | Start: 3850 |
| Tm | 60.038 | 60.036 | End: 3978 |
| Size | 20 | 20 | 129 |
| Primer 3 details |
|---|
| Sequence | GACTTGCCTGAAAAGCACGG | TGCGACGGGGAAAATAACGA | Start: 2036 |
| Tm | 60.04 | 60.038 | End: 2313 |
| Size | 20 | 20 | 278 |
| Primer 4 details |
|---|
| Sequence | ACGGCGGAGTTAGGTTGAAG | GACGCTCGTACTCGTACTCG | Start: 3851 |
| Tm | 60.038 | 60.044 | End: 4044 |
| Size | 20 | 20 | 194 |
| Primer 5 details |
|---|
| Sequence | ACGGCGGAGTTAGGTTGAAG | CGACGCTCGTACTCGTACTC | Start: 3851 |
| Tm | 60.038 | 60.044 | End: 4045 |
| Size | 20 | 20 | 195 |
(ATC)5(TTC)5ttggttaaattaatatcacaatttcctaagggatggtcctagtgataaagacttagtttatcaga(AAAG)5: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | ACGGCGGAGTTAGGTTGAAG | TGGCGGAACTGGATCAGAAC | Start: 3851 |
| Tm | 60.038 | 60.036 | End: 3978 |
| Size | 20 | 20 | 128 |
| Primer 2 details |
|---|
| Sequence | GACGGCGGAGTTAGGTTGAA | TGGCGGAACTGGATCAGAAC | Start: 3850 |
| Tm | 60.038 | 60.036 | End: 3978 |
| Size | 20 | 20 | 129 |
| Primer 3 details |
|---|
| Sequence | GACTTGCCTGAAAAGCACGG | TGCGACGGGGAAAATAACGA | Start: 2036 |
| Tm | 60.04 | 60.038 | End: 2313 |
| Size | 20 | 20 | 278 |
| Primer 4 details |
|---|
| Sequence | ACGGCGGAGTTAGGTTGAAG | GACGCTCGTACTCGTACTCG | Start: 3851 |
| Tm | 60.038 | 60.044 | End: 4044 |
| Size | 20 | 20 | 194 |
| Primer 5 details |
|---|
| Sequence | ACGGCGGAGTTAGGTTGAAG | CGACGCTCGTACTCGTACTC | Start: 3851 |
| Tm | 60.038 | 60.044 | End: 4045 |
| Size | 20 | 20 | 195 |
(TCC)6: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | ACGGCGGAGTTAGGTTGAAG | TGGCGGAACTGGATCAGAAC | Start: 3851 |
| Tm | 60.038 | 60.036 | End: 3978 |
| Size | 20 | 20 | 128 |
| Primer 2 details |
|---|
| Sequence | GACGGCGGAGTTAGGTTGAA | TGGCGGAACTGGATCAGAAC | Start: 3850 |
| Tm | 60.038 | 60.036 | End: 3978 |
| Size | 20 | 20 | 129 |
| Primer 3 details |
|---|
| Sequence | GACTTGCCTGAAAAGCACGG | TGCGACGGGGAAAATAACGA | Start: 2036 |
| Tm | 60.04 | 60.038 | End: 2313 |
| Size | 20 | 20 | 278 |
| Primer 4 details |
|---|
| Sequence | ACGGCGGAGTTAGGTTGAAG | GACGCTCGTACTCGTACTCG | Start: 3851 |
| Tm | 60.038 | 60.044 | End: 4044 |
| Size | 20 | 20 | 194 |
| Primer 5 details |
|---|
| Sequence | ACGGCGGAGTTAGGTTGAAG | CGACGCTCGTACTCGTACTC | Start: 3851 |
| Tm | 60.038 | 60.044 | End: 4045 |
| Size | 20 | 20 | 195 |
(AAAG)6: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | ACGGCGGAGTTAGGTTGAAG | TGGCGGAACTGGATCAGAAC | Start: 3851 |
| Tm | 60.038 | 60.036 | End: 3978 |
| Size | 20 | 20 | 128 |
| Primer 2 details |
|---|
| Sequence | GACGGCGGAGTTAGGTTGAA | TGGCGGAACTGGATCAGAAC | Start: 3850 |
| Tm | 60.038 | 60.036 | End: 3978 |
| Size | 20 | 20 | 129 |
| Primer 3 details |
|---|
| Sequence | GACTTGCCTGAAAAGCACGG | TGCGACGGGGAAAATAACGA | Start: 2036 |
| Tm | 60.04 | 60.038 | End: 2313 |
| Size | 20 | 20 | 278 |
| Primer 4 details |
|---|
| Sequence | ACGGCGGAGTTAGGTTGAAG | GACGCTCGTACTCGTACTCG | Start: 3851 |
| Tm | 60.038 | 60.044 | End: 4044 |
| Size | 20 | 20 | 194 |
| Primer 5 details |
|---|
| Sequence | ACGGCGGAGTTAGGTTGAAG | CGACGCTCGTACTCGTACTC | Start: 3851 |
| Tm | 60.038 | 60.044 | End: 4045 |
| Size | 20 | 20 | 195 |
(TA)9: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | ACGGCGGAGTTAGGTTGAAG | TGGCGGAACTGGATCAGAAC | Start: 3851 |
| Tm | 60.038 | 60.036 | End: 3978 |
| Size | 20 | 20 | 128 |
| Primer 2 details |
|---|
| Sequence | GACGGCGGAGTTAGGTTGAA | TGGCGGAACTGGATCAGAAC | Start: 3850 |
| Tm | 60.038 | 60.036 | End: 3978 |
| Size | 20 | 20 | 129 |
| Primer 3 details |
|---|
| Sequence | GACTTGCCTGAAAAGCACGG | TGCGACGGGGAAAATAACGA | Start: 2036 |
| Tm | 60.04 | 60.038 | End: 2313 |
| Size | 20 | 20 | 278 |
| Primer 4 details |
|---|
| Sequence | ACGGCGGAGTTAGGTTGAAG | GACGCTCGTACTCGTACTCG | Start: 3851 |
| Tm | 60.038 | 60.044 | End: 4044 |
| Size | 20 | 20 | 194 |
| Primer 5 details |
|---|
| Sequence | ACGGCGGAGTTAGGTTGAAG | CGACGCTCGTACTCGTACTC | Start: 3851 |
| Tm | 60.038 | 60.044 | End: 4045 |
| Size | 20 | 20 | 195 |
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