ssr_primer
Primer Details for TRINITY_DN11830_c1_g5_i1 |
|---|
| (GA)7: Primer 1 details |
|---|
| Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CAAAGCTTGGTGTGACGACG | TCCTCCGATTTTGGGTGACG | Start: 1620 |
| Tm | 60.042 | 60.037 | End: 1811 |
| Size | 20 | 20 | 192 |
| Primer 2 details |
|---|
| Sequence | GGAGATTCTCGGCGATCAGG | CGTCGTCACACCAAGCTTTG | Start: 1522 |
| Tm | 60.039 | 60.042 | End: 1639 |
| Size | 20 | 20 | 118 |
| Primer 3 details |
|---|
| Sequence | GGGAGATTCTCGGCGATCAG | CGTCGTCACACCAAGCTTTG | Start: 1521 |
| Tm | 60.039 | 60.042 | End: 1639 |
| Size | 20 | 20 | 119 |
| Primer 4 details |
|---|
| Sequence | CAGGGAGATTCTCGGCGATC | CGTCGTCACACCAAGCTTTG | Start: 1519 |
| Tm | 60.039 | 60.042 | End: 1639 |
| Size | 20 | 20 | 121 |
| Primer 5 details |
|---|
| Sequence | AGAGAGAGATGAGTGGCGGT | CTTCCTCCTCCTCCTCCTCC | Start: 1095 |
| Tm | 60.034 | 60.106 | End: 1261 |
| Size | 20 | 20 | 167 |
(CTTTT)5tttttgtaatttttaggaagctccaactccaaggaaatcaatgaattgcattttcat(ATG)5: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CAAAGCTTGGTGTGACGACG | TCCTCCGATTTTGGGTGACG | Start: 1620 |
| Tm | 60.042 | 60.037 | End: 1811 |
| Size | 20 | 20 | 192 |
| Primer 2 details |
|---|
| Sequence | GGAGATTCTCGGCGATCAGG | CGTCGTCACACCAAGCTTTG | Start: 1522 |
| Tm | 60.039 | 60.042 | End: 1639 |
| Size | 20 | 20 | 118 |
| Primer 3 details |
|---|
| Sequence | GGGAGATTCTCGGCGATCAG | CGTCGTCACACCAAGCTTTG | Start: 1521 |
| Tm | 60.039 | 60.042 | End: 1639 |
| Size | 20 | 20 | 119 |
| Primer 4 details |
|---|
| Sequence | CAGGGAGATTCTCGGCGATC | CGTCGTCACACCAAGCTTTG | Start: 1519 |
| Tm | 60.039 | 60.042 | End: 1639 |
| Size | 20 | 20 | 121 |
| Primer 5 details |
|---|
| Sequence | AGAGAGAGATGAGTGGCGGT | CTTCCTCCTCCTCCTCCTCC | Start: 1095 |
| Tm | 60.034 | 60.106 | End: 1261 |
| Size | 20 | 20 | 167 |
(GA)6: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CAAAGCTTGGTGTGACGACG | TCCTCCGATTTTGGGTGACG | Start: 1620 |
| Tm | 60.042 | 60.037 | End: 1811 |
| Size | 20 | 20 | 192 |
| Primer 2 details |
|---|
| Sequence | GGAGATTCTCGGCGATCAGG | CGTCGTCACACCAAGCTTTG | Start: 1522 |
| Tm | 60.039 | 60.042 | End: 1639 |
| Size | 20 | 20 | 118 |
| Primer 3 details |
|---|
| Sequence | GGGAGATTCTCGGCGATCAG | CGTCGTCACACCAAGCTTTG | Start: 1521 |
| Tm | 60.039 | 60.042 | End: 1639 |
| Size | 20 | 20 | 119 |
| Primer 4 details |
|---|
| Sequence | CAGGGAGATTCTCGGCGATC | CGTCGTCACACCAAGCTTTG | Start: 1519 |
| Tm | 60.039 | 60.042 | End: 1639 |
| Size | 20 | 20 | 121 |
| Primer 5 details |
|---|
| Sequence | AGAGAGAGATGAGTGGCGGT | CTTCCTCCTCCTCCTCCTCC | Start: 1095 |
| Tm | 60.034 | 60.106 | End: 1261 |
| Size | 20 | 20 | 167 |
(GAG)6: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CAAAGCTTGGTGTGACGACG | TCCTCCGATTTTGGGTGACG | Start: 1620 |
| Tm | 60.042 | 60.037 | End: 1811 |
| Size | 20 | 20 | 192 |
| Primer 2 details |
|---|
| Sequence | GGAGATTCTCGGCGATCAGG | CGTCGTCACACCAAGCTTTG | Start: 1522 |
| Tm | 60.039 | 60.042 | End: 1639 |
| Size | 20 | 20 | 118 |
| Primer 3 details |
|---|
| Sequence | GGGAGATTCTCGGCGATCAG | CGTCGTCACACCAAGCTTTG | Start: 1521 |
| Tm | 60.039 | 60.042 | End: 1639 |
| Size | 20 | 20 | 119 |
| Primer 4 details |
|---|
| Sequence | CAGGGAGATTCTCGGCGATC | CGTCGTCACACCAAGCTTTG | Start: 1519 |
| Tm | 60.039 | 60.042 | End: 1639 |
| Size | 20 | 20 | 121 |
| Primer 5 details |
|---|
| Sequence | AGAGAGAGATGAGTGGCGGT | CTTCCTCCTCCTCCTCCTCC | Start: 1095 |
| Tm | 60.034 | 60.106 | End: 1261 |
| Size | 20 | 20 | 167 |
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