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CsExSLDb: Transcriptome based Cucumis sativus Extended Shelf Life Database

ssr_primer

Primer Details for TRINITY_DN5903_c0_g1_i1

(TTTTC)5: Primer 1 details
Primer CharacteristicsForward PrimerReverse PrimerProduct Details
SequenceGCGTTTTAAGTGCCTGGCTTGGTGTGTGTGTGTTTGGCAAStart: 100
Tm59.68659.755End: 221
Size2020122
Primer 2 details
SequenceGCGTTTTAAGTGCCTGGCTTTTGGTGTGTGTGTGTTTGGCStart: 100
Tm59.68659.755End: 223
Size2020124
Primer 3 details
SequenceCCCTGTGTGCCTGACCATAAGGTGTGTGTGTGTTTGGCAAStart: 122
Tm59.67259.755End: 221
Size2020100
Primer 4 details
SequenceCCCTGTGTGCCTGACCATAATTGGTGTGTGTGTGTTTGGCStart: 122
Tm59.67259.755End: 223
Size2020102
Primer 5 details
SequenceCAGCGTTTTAAGTGCCTGGCGGTGTGTGTGTGTTTGGCAAStart: 98
Tm60.38759.755End: 221
Size2020124
(AC)6caaaattgagctttaaacagagagaaacaaaaacacccattttgagaagaagaaaaaaaatccctcaaaacgg(GAA)8: Primer 1 details
Primer CharacteristicsForward PrimerReverse PrimerProduct Details
SequenceGCGTTTTAAGTGCCTGGCTTGGTGTGTGTGTGTTTGGCAAStart: 100
Tm59.68659.755End: 221
Size2020122
Primer 2 details
SequenceGCGTTTTAAGTGCCTGGCTTTTGGTGTGTGTGTGTTTGGCStart: 100
Tm59.68659.755End: 223
Size2020124
Primer 3 details
SequenceCCCTGTGTGCCTGACCATAAGGTGTGTGTGTGTTTGGCAAStart: 122
Tm59.67259.755End: 221
Size2020100
Primer 4 details
SequenceCCCTGTGTGCCTGACCATAATTGGTGTGTGTGTGTTTGGCStart: 122
Tm59.67259.755End: 223
Size2020102
Primer 5 details
SequenceCAGCGTTTTAAGTGCCTGGCGGTGTGTGTGTGTTTGGCAAStart: 98
Tm60.38759.755End: 221
Size2020124
(GAA)7: Primer 1 details
Primer CharacteristicsForward PrimerReverse PrimerProduct Details
SequenceGCGTTTTAAGTGCCTGGCTTGGTGTGTGTGTGTTTGGCAAStart: 100
Tm59.68659.755End: 221
Size2020122
Primer 2 details
SequenceGCGTTTTAAGTGCCTGGCTTTTGGTGTGTGTGTGTTTGGCStart: 100
Tm59.68659.755End: 223
Size2020124
Primer 3 details
SequenceCCCTGTGTGCCTGACCATAAGGTGTGTGTGTGTTTGGCAAStart: 122
Tm59.67259.755End: 221
Size2020100
Primer 4 details
SequenceCCCTGTGTGCCTGACCATAATTGGTGTGTGTGTGTTTGGCStart: 122
Tm59.67259.755End: 223
Size2020102
Primer 5 details
SequenceCAGCGTTTTAAGTGCCTGGCGGTGTGTGTGTGTTTGGCAAStart: 98
Tm60.38759.755End: 221
Size2020124

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