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CsExSLDb: Transcriptome based Cucumis sativus Extended Shelf Life Database

ssr_primer

Primer Details for TRINITY_DN14543_c3_g1_i7

(AT)6: Primer 1 details
Primer CharacteristicsForward PrimerReverse PrimerProduct Details
SequenceTCGCGGATTTGGGAATTGGATCGGACTCGAAACTCCTCCTStart: 4289
Tm60.03559.962End: 4388
Size2020100
Primer 2 details
SequenceTGTGATCGCGGATTTGGGAATCGGACTCGAAACTCCTCCTStart: 4284
Tm60.03659.962End: 4388
Size2020105
Primer 3 details
SequenceAAATTGCAACAGCCGCAGAGAATGAAGAAGTGGGCGAGGGStart: 3433
Tm60.03960.035End: 3609
Size2020177
Primer 4 details
SequenceGAAATTGCAACAGCCGCAGAAATGAAGAAGTGGGCGAGGGStart: 3432
Tm60.03960.035End: 3609
Size2020178
Primer 5 details
SequenceAGGATGGAGCTACAGGTGGTTCCAATTCCCAAATCCGCGAStart: 4080
Tm59.95760.035End: 4308
Size2020229
(A)14: Primer 1 details
Primer CharacteristicsForward PrimerReverse PrimerProduct Details
SequenceTCGCGGATTTGGGAATTGGATCGGACTCGAAACTCCTCCTStart: 4289
Tm60.03559.962End: 4388
Size2020100
Primer 2 details
SequenceTGTGATCGCGGATTTGGGAATCGGACTCGAAACTCCTCCTStart: 4284
Tm60.03659.962End: 4388
Size2020105
Primer 3 details
SequenceAAATTGCAACAGCCGCAGAGAATGAAGAAGTGGGCGAGGGStart: 3433
Tm60.03960.035End: 3609
Size2020177
Primer 4 details
SequenceGAAATTGCAACAGCCGCAGAAATGAAGAAGTGGGCGAGGGStart: 3432
Tm60.03960.035End: 3609
Size2020178
Primer 5 details
SequenceAGGATGGAGCTACAGGTGGTTCCAATTCCCAAATCCGCGAStart: 4080
Tm59.95760.035End: 4308
Size2020229
(A)10: Primer 1 details
Primer CharacteristicsForward PrimerReverse PrimerProduct Details
SequenceTCGCGGATTTGGGAATTGGATCGGACTCGAAACTCCTCCTStart: 4289
Tm60.03559.962End: 4388
Size2020100
Primer 2 details
SequenceTGTGATCGCGGATTTGGGAATCGGACTCGAAACTCCTCCTStart: 4284
Tm60.03659.962End: 4388
Size2020105
Primer 3 details
SequenceAAATTGCAACAGCCGCAGAGAATGAAGAAGTGGGCGAGGGStart: 3433
Tm60.03960.035End: 3609
Size2020177
Primer 4 details
SequenceGAAATTGCAACAGCCGCAGAAATGAAGAAGTGGGCGAGGGStart: 3432
Tm60.03960.035End: 3609
Size2020178
Primer 5 details
SequenceAGGATGGAGCTACAGGTGGTTCCAATTCCCAAATCCGCGAStart: 4080
Tm59.95760.035End: 4308
Size2020229
(AAT)5: Primer 1 details
Primer CharacteristicsForward PrimerReverse PrimerProduct Details
SequenceTCGCGGATTTGGGAATTGGATCGGACTCGAAACTCCTCCTStart: 4289
Tm60.03559.962End: 4388
Size2020100
Primer 2 details
SequenceTGTGATCGCGGATTTGGGAATCGGACTCGAAACTCCTCCTStart: 4284
Tm60.03659.962End: 4388
Size2020105
Primer 3 details
SequenceAAATTGCAACAGCCGCAGAGAATGAAGAAGTGGGCGAGGGStart: 3433
Tm60.03960.035End: 3609
Size2020177
Primer 4 details
SequenceGAAATTGCAACAGCCGCAGAAATGAAGAAGTGGGCGAGGGStart: 3432
Tm60.03960.035End: 3609
Size2020178
Primer 5 details
SequenceAGGATGGAGCTACAGGTGGTTCCAATTCCCAAATCCGCGAStart: 4080
Tm59.95760.035End: 4308
Size2020229
(CA)10: Primer 1 details
Primer CharacteristicsForward PrimerReverse PrimerProduct Details
SequenceTCGCGGATTTGGGAATTGGATCGGACTCGAAACTCCTCCTStart: 4289
Tm60.03559.962End: 4388
Size2020100
Primer 2 details
SequenceTGTGATCGCGGATTTGGGAATCGGACTCGAAACTCCTCCTStart: 4284
Tm60.03659.962End: 4388
Size2020105
Primer 3 details
SequenceAAATTGCAACAGCCGCAGAGAATGAAGAAGTGGGCGAGGGStart: 3433
Tm60.03960.035End: 3609
Size2020177
Primer 4 details
SequenceGAAATTGCAACAGCCGCAGAAATGAAGAAGTGGGCGAGGGStart: 3432
Tm60.03960.035End: 3609
Size2020178
Primer 5 details
SequenceAGGATGGAGCTACAGGTGGTTCCAATTCCCAAATCCGCGAStart: 4080
Tm59.95760.035End: 4308
Size2020229
(A)10: Primer 1 details
Primer CharacteristicsForward PrimerReverse PrimerProduct Details
SequenceTCGCGGATTTGGGAATTGGATCGGACTCGAAACTCCTCCTStart: 4289
Tm60.03559.962End: 4388
Size2020100
Primer 2 details
SequenceTGTGATCGCGGATTTGGGAATCGGACTCGAAACTCCTCCTStart: 4284
Tm60.03659.962End: 4388
Size2020105
Primer 3 details
SequenceAAATTGCAACAGCCGCAGAGAATGAAGAAGTGGGCGAGGGStart: 3433
Tm60.03960.035End: 3609
Size2020177
Primer 4 details
SequenceGAAATTGCAACAGCCGCAGAAATGAAGAAGTGGGCGAGGGStart: 3432
Tm60.03960.035End: 3609
Size2020178
Primer 5 details
SequenceAGGATGGAGCTACAGGTGGTTCCAATTCCCAAATCCGCGAStart: 4080
Tm59.95760.035End: 4308
Size2020229
(CT)11agaagagagactggcgactggagtaggctttgaatgtgatcgcggatttgggaattggaagcgaagaaatgaagtggccgat(TTC)5: Primer 1 details
Primer CharacteristicsForward PrimerReverse PrimerProduct Details
SequenceTCGCGGATTTGGGAATTGGATCGGACTCGAAACTCCTCCTStart: 4289
Tm60.03559.962End: 4388
Size2020100
Primer 2 details
SequenceTGTGATCGCGGATTTGGGAATCGGACTCGAAACTCCTCCTStart: 4284
Tm60.03659.962End: 4388
Size2020105
Primer 3 details
SequenceAAATTGCAACAGCCGCAGAGAATGAAGAAGTGGGCGAGGGStart: 3433
Tm60.03960.035End: 3609
Size2020177
Primer 4 details
SequenceGAAATTGCAACAGCCGCAGAAATGAAGAAGTGGGCGAGGGStart: 3432
Tm60.03960.035End: 3609
Size2020178
Primer 5 details
SequenceAGGATGGAGCTACAGGTGGTTCCAATTCCCAAATCCGCGAStart: 4080
Tm59.95760.035End: 4308
Size2020229

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