ssr_primer
Primer Details for TRINITY_DN11216_c0_g5_i5 |
|---|
| (CAT)6: Primer 1 details |
|---|
| Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | AGGCTCCCAGTGATGAGGAT | ACTCCTCCATCAGCAGCAAC | Start: 5577 |
| Tm | 60.03 | 60.036 | End: 5820 |
| Size | 20 | 20 | 244 |
| Primer 2 details |
|---|
| Sequence | AGGCTCCCAGTGATGAGGAT | CTCCTCCATCAGCAGCAACA | Start: 5577 |
| Tm | 60.03 | 60.036 | End: 5819 |
| Size | 20 | 20 | 243 |
| Primer 3 details |
|---|
| Sequence | GAGGCTTACTGGGAGAGGGA | CCCTGGCATCTCGACCATAC | Start: 1571 |
| Tm | 60.032 | 59.966 | End: 1733 |
| Size | 20 | 20 | 163 |
| Primer 4 details |
|---|
| Sequence | ACCACCCAAGCTCAAACACA | AACCTGCCCAAACTGTCCAA | Start: 7127 |
| Tm | 60.034 | 60.033 | End: 7339 |
| Size | 20 | 20 | 213 |
| Primer 5 details |
|---|
| Sequence | GTCAAGCTGAGCCTCCTGTT | GTTTGAACAGTGGGCGGAAC | Start: 4362 |
| Tm | 59.964 | 59.97 | End: 4626 |
| Size | 20 | 20 | 265 |
(GCA)5: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | AGGCTCCCAGTGATGAGGAT | ACTCCTCCATCAGCAGCAAC | Start: 5577 |
| Tm | 60.03 | 60.036 | End: 5820 |
| Size | 20 | 20 | 244 |
| Primer 2 details |
|---|
| Sequence | AGGCTCCCAGTGATGAGGAT | CTCCTCCATCAGCAGCAACA | Start: 5577 |
| Tm | 60.03 | 60.036 | End: 5819 |
| Size | 20 | 20 | 243 |
| Primer 3 details |
|---|
| Sequence | GAGGCTTACTGGGAGAGGGA | CCCTGGCATCTCGACCATAC | Start: 1571 |
| Tm | 60.032 | 59.966 | End: 1733 |
| Size | 20 | 20 | 163 |
| Primer 4 details |
|---|
| Sequence | ACCACCCAAGCTCAAACACA | AACCTGCCCAAACTGTCCAA | Start: 7127 |
| Tm | 60.034 | 60.033 | End: 7339 |
| Size | 20 | 20 | 213 |
| Primer 5 details |
|---|
| Sequence | GTCAAGCTGAGCCTCCTGTT | GTTTGAACAGTGGGCGGAAC | Start: 4362 |
| Tm | 59.964 | 59.97 | End: 4626 |
| Size | 20 | 20 | 265 |
(T)11: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | AGGCTCCCAGTGATGAGGAT | ACTCCTCCATCAGCAGCAAC | Start: 5577 |
| Tm | 60.03 | 60.036 | End: 5820 |
| Size | 20 | 20 | 244 |
| Primer 2 details |
|---|
| Sequence | AGGCTCCCAGTGATGAGGAT | CTCCTCCATCAGCAGCAACA | Start: 5577 |
| Tm | 60.03 | 60.036 | End: 5819 |
| Size | 20 | 20 | 243 |
| Primer 3 details |
|---|
| Sequence | GAGGCTTACTGGGAGAGGGA | CCCTGGCATCTCGACCATAC | Start: 1571 |
| Tm | 60.032 | 59.966 | End: 1733 |
| Size | 20 | 20 | 163 |
| Primer 4 details |
|---|
| Sequence | ACCACCCAAGCTCAAACACA | AACCTGCCCAAACTGTCCAA | Start: 7127 |
| Tm | 60.034 | 60.033 | End: 7339 |
| Size | 20 | 20 | 213 |
| Primer 5 details |
|---|
| Sequence | GTCAAGCTGAGCCTCCTGTT | GTTTGAACAGTGGGCGGAAC | Start: 4362 |
| Tm | 59.964 | 59.97 | End: 4626 |
| Size | 20 | 20 | 265 |
(AT)15: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | AGGCTCCCAGTGATGAGGAT | ACTCCTCCATCAGCAGCAAC | Start: 5577 |
| Tm | 60.03 | 60.036 | End: 5820 |
| Size | 20 | 20 | 244 |
| Primer 2 details |
|---|
| Sequence | AGGCTCCCAGTGATGAGGAT | CTCCTCCATCAGCAGCAACA | Start: 5577 |
| Tm | 60.03 | 60.036 | End: 5819 |
| Size | 20 | 20 | 243 |
| Primer 3 details |
|---|
| Sequence | GAGGCTTACTGGGAGAGGGA | CCCTGGCATCTCGACCATAC | Start: 1571 |
| Tm | 60.032 | 59.966 | End: 1733 |
| Size | 20 | 20 | 163 |
| Primer 4 details |
|---|
| Sequence | ACCACCCAAGCTCAAACACA | AACCTGCCCAAACTGTCCAA | Start: 7127 |
| Tm | 60.034 | 60.033 | End: 7339 |
| Size | 20 | 20 | 213 |
| Primer 5 details |
|---|
| Sequence | GTCAAGCTGAGCCTCCTGTT | GTTTGAACAGTGGGCGGAAC | Start: 4362 |
| Tm | 59.964 | 59.97 | End: 4626 |
| Size | 20 | 20 | 265 |
(T)10: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | AGGCTCCCAGTGATGAGGAT | ACTCCTCCATCAGCAGCAAC | Start: 5577 |
| Tm | 60.03 | 60.036 | End: 5820 |
| Size | 20 | 20 | 244 |
| Primer 2 details |
|---|
| Sequence | AGGCTCCCAGTGATGAGGAT | CTCCTCCATCAGCAGCAACA | Start: 5577 |
| Tm | 60.03 | 60.036 | End: 5819 |
| Size | 20 | 20 | 243 |
| Primer 3 details |
|---|
| Sequence | GAGGCTTACTGGGAGAGGGA | CCCTGGCATCTCGACCATAC | Start: 1571 |
| Tm | 60.032 | 59.966 | End: 1733 |
| Size | 20 | 20 | 163 |
| Primer 4 details |
|---|
| Sequence | ACCACCCAAGCTCAAACACA | AACCTGCCCAAACTGTCCAA | Start: 7127 |
| Tm | 60.034 | 60.033 | End: 7339 |
| Size | 20 | 20 | 213 |
| Primer 5 details |
|---|
| Sequence | GTCAAGCTGAGCCTCCTGTT | GTTTGAACAGTGGGCGGAAC | Start: 4362 |
| Tm | 59.964 | 59.97 | End: 4626 |
| Size | 20 | 20 | 265 |
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