ssr_primer
Primer Details for TRINITY_DN14620_c5_g1_i7 |
|---|
| (T)38: Primer 1 details |
|---|
| Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | GCCTCAGACAATCCACCACA | CTTTCCCTTGTTGGTTGCCG | Start: 3851 |
| Tm | 59.963 | 59.968 | End: 4074 |
| Size | 20 | 20 | 224 |
| Primer 2 details |
|---|
| Sequence | TGCCTCAGACAATCCACCAC | CTTTCCCTTGTTGGTTGCCG | Start: 3850 |
| Tm | 59.963 | 59.968 | End: 4074 |
| Size | 20 | 20 | 225 |
| Primer 3 details |
|---|
| Sequence | GAGGGTGGGGAGTGGAGTAT | TTCATTGTCCGGCATCCCAA | Start: 3117 |
| Tm | 60.031 | 59.961 | End: 3379 |
| Size | 20 | 20 | 263 |
| Primer 4 details |
|---|
| Sequence | GAGGGTGGGGAGTGGAGTAT | TTTCATTGTCCGGCATCCCA | Start: 3117 |
| Tm | 60.031 | 59.961 | End: 3380 |
| Size | 20 | 20 | 264 |
| Primer 5 details |
|---|
| Sequence | TCGTGCATTGCTCTGACCAT | GACGAAAGGGCAAGGGAAGA | Start: 6500 |
| Tm | 60.036 | 59.964 | End: 6723 |
| Size | 20 | 20 | 224 |
(T)12: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | GCCTCAGACAATCCACCACA | CTTTCCCTTGTTGGTTGCCG | Start: 3851 |
| Tm | 59.963 | 59.968 | End: 4074 |
| Size | 20 | 20 | 224 |
| Primer 2 details |
|---|
| Sequence | TGCCTCAGACAATCCACCAC | CTTTCCCTTGTTGGTTGCCG | Start: 3850 |
| Tm | 59.963 | 59.968 | End: 4074 |
| Size | 20 | 20 | 225 |
| Primer 3 details |
|---|
| Sequence | GAGGGTGGGGAGTGGAGTAT | TTCATTGTCCGGCATCCCAA | Start: 3117 |
| Tm | 60.031 | 59.961 | End: 3379 |
| Size | 20 | 20 | 263 |
| Primer 4 details |
|---|
| Sequence | GAGGGTGGGGAGTGGAGTAT | TTTCATTGTCCGGCATCCCA | Start: 3117 |
| Tm | 60.031 | 59.961 | End: 3380 |
| Size | 20 | 20 | 264 |
| Primer 5 details |
|---|
| Sequence | TCGTGCATTGCTCTGACCAT | GACGAAAGGGCAAGGGAAGA | Start: 6500 |
| Tm | 60.036 | 59.964 | End: 6723 |
| Size | 20 | 20 | 224 |
(A)22: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | GCCTCAGACAATCCACCACA | CTTTCCCTTGTTGGTTGCCG | Start: 3851 |
| Tm | 59.963 | 59.968 | End: 4074 |
| Size | 20 | 20 | 224 |
| Primer 2 details |
|---|
| Sequence | TGCCTCAGACAATCCACCAC | CTTTCCCTTGTTGGTTGCCG | Start: 3850 |
| Tm | 59.963 | 59.968 | End: 4074 |
| Size | 20 | 20 | 225 |
| Primer 3 details |
|---|
| Sequence | GAGGGTGGGGAGTGGAGTAT | TTCATTGTCCGGCATCCCAA | Start: 3117 |
| Tm | 60.031 | 59.961 | End: 3379 |
| Size | 20 | 20 | 263 |
| Primer 4 details |
|---|
| Sequence | GAGGGTGGGGAGTGGAGTAT | TTTCATTGTCCGGCATCCCA | Start: 3117 |
| Tm | 60.031 | 59.961 | End: 3380 |
| Size | 20 | 20 | 264 |
| Primer 5 details |
|---|
| Sequence | TCGTGCATTGCTCTGACCAT | GACGAAAGGGCAAGGGAAGA | Start: 6500 |
| Tm | 60.036 | 59.964 | End: 6723 |
| Size | 20 | 20 | 224 |
(TG)8: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | GCCTCAGACAATCCACCACA | CTTTCCCTTGTTGGTTGCCG | Start: 3851 |
| Tm | 59.963 | 59.968 | End: 4074 |
| Size | 20 | 20 | 224 |
| Primer 2 details |
|---|
| Sequence | TGCCTCAGACAATCCACCAC | CTTTCCCTTGTTGGTTGCCG | Start: 3850 |
| Tm | 59.963 | 59.968 | End: 4074 |
| Size | 20 | 20 | 225 |
| Primer 3 details |
|---|
| Sequence | GAGGGTGGGGAGTGGAGTAT | TTCATTGTCCGGCATCCCAA | Start: 3117 |
| Tm | 60.031 | 59.961 | End: 3379 |
| Size | 20 | 20 | 263 |
| Primer 4 details |
|---|
| Sequence | GAGGGTGGGGAGTGGAGTAT | TTTCATTGTCCGGCATCCCA | Start: 3117 |
| Tm | 60.031 | 59.961 | End: 3380 |
| Size | 20 | 20 | 264 |
| Primer 5 details |
|---|
| Sequence | TCGTGCATTGCTCTGACCAT | GACGAAAGGGCAAGGGAAGA | Start: 6500 |
| Tm | 60.036 | 59.964 | End: 6723 |
| Size | 20 | 20 | 224 |
(TCT)6: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | GCCTCAGACAATCCACCACA | CTTTCCCTTGTTGGTTGCCG | Start: 3851 |
| Tm | 59.963 | 59.968 | End: 4074 |
| Size | 20 | 20 | 224 |
| Primer 2 details |
|---|
| Sequence | TGCCTCAGACAATCCACCAC | CTTTCCCTTGTTGGTTGCCG | Start: 3850 |
| Tm | 59.963 | 59.968 | End: 4074 |
| Size | 20 | 20 | 225 |
| Primer 3 details |
|---|
| Sequence | GAGGGTGGGGAGTGGAGTAT | TTCATTGTCCGGCATCCCAA | Start: 3117 |
| Tm | 60.031 | 59.961 | End: 3379 |
| Size | 20 | 20 | 263 |
| Primer 4 details |
|---|
| Sequence | GAGGGTGGGGAGTGGAGTAT | TTTCATTGTCCGGCATCCCA | Start: 3117 |
| Tm | 60.031 | 59.961 | End: 3380 |
| Size | 20 | 20 | 264 |
| Primer 5 details |
|---|
| Sequence | TCGTGCATTGCTCTGACCAT | GACGAAAGGGCAAGGGAAGA | Start: 6500 |
| Tm | 60.036 | 59.964 | End: 6723 |
| Size | 20 | 20 | 224 |
(AG)14: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | GCCTCAGACAATCCACCACA | CTTTCCCTTGTTGGTTGCCG | Start: 3851 |
| Tm | 59.963 | 59.968 | End: 4074 |
| Size | 20 | 20 | 224 |
| Primer 2 details |
|---|
| Sequence | TGCCTCAGACAATCCACCAC | CTTTCCCTTGTTGGTTGCCG | Start: 3850 |
| Tm | 59.963 | 59.968 | End: 4074 |
| Size | 20 | 20 | 225 |
| Primer 3 details |
|---|
| Sequence | GAGGGTGGGGAGTGGAGTAT | TTCATTGTCCGGCATCCCAA | Start: 3117 |
| Tm | 60.031 | 59.961 | End: 3379 |
| Size | 20 | 20 | 263 |
| Primer 4 details |
|---|
| Sequence | GAGGGTGGGGAGTGGAGTAT | TTTCATTGTCCGGCATCCCA | Start: 3117 |
| Tm | 60.031 | 59.961 | End: 3380 |
| Size | 20 | 20 | 264 |
| Primer 5 details |
|---|
| Sequence | TCGTGCATTGCTCTGACCAT | GACGAAAGGGCAAGGGAAGA | Start: 6500 |
| Tm | 60.036 | 59.964 | End: 6723 |
| Size | 20 | 20 | 224 |
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