ssr_primer
Primer Details for TRINITY_DN11854_c6_g3_i22 |
|---|
| (TA)6: Primer 1 details |
|---|
| Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CCTCTCACCCCAAATGTCCC | TTGCTGGTCTTCGGAGTGTC | Start: 2987 |
| Tm | 60.034 | 59.966 | End: 3117 |
| Size | 20 | 20 | 131 |
| Primer 2 details |
|---|
| Sequence | GACACTCCGAAGACCAGCAA | CATTTTGGGGCAGTCAACCG | Start: 3098 |
| Tm | 59.966 | 60.038 | End: 3348 |
| Size | 20 | 20 | 251 |
| Primer 3 details |
|---|
| Sequence | TCCCCCTTACCCCGAAAGAT | TTGCTGGTCTTCGGAGTGTC | Start: 2958 |
| Tm | 59.955 | 59.966 | End: 3117 |
| Size | 20 | 20 | 160 |
| Primer 4 details |
|---|
| Sequence | TGCCGTGTGAAGCACAAAAG | TGCTTTGAACTGTTGCGAGC | Start: 4043 |
| Tm | 59.9 | 59.971 | End: 4180 |
| Size | 20 | 20 | 138 |
| Primer 5 details |
|---|
| Sequence | GATCCCCTTTGCACGTCTGA | GAACAGAGCATGCTTCAGCG | Start: 2108 |
| Tm | 60.036 | 59.903 | End: 2327 |
| Size | 20 | 20 | 220 |
(AT)7: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CCTCTCACCCCAAATGTCCC | TTGCTGGTCTTCGGAGTGTC | Start: 2987 |
| Tm | 60.034 | 59.966 | End: 3117 |
| Size | 20 | 20 | 131 |
| Primer 2 details |
|---|
| Sequence | GACACTCCGAAGACCAGCAA | CATTTTGGGGCAGTCAACCG | Start: 3098 |
| Tm | 59.966 | 60.038 | End: 3348 |
| Size | 20 | 20 | 251 |
| Primer 3 details |
|---|
| Sequence | TCCCCCTTACCCCGAAAGAT | TTGCTGGTCTTCGGAGTGTC | Start: 2958 |
| Tm | 59.955 | 59.966 | End: 3117 |
| Size | 20 | 20 | 160 |
| Primer 4 details |
|---|
| Sequence | TGCCGTGTGAAGCACAAAAG | TGCTTTGAACTGTTGCGAGC | Start: 4043 |
| Tm | 59.9 | 59.971 | End: 4180 |
| Size | 20 | 20 | 138 |
| Primer 5 details |
|---|
| Sequence | GATCCCCTTTGCACGTCTGA | GAACAGAGCATGCTTCAGCG | Start: 2108 |
| Tm | 60.036 | 59.903 | End: 2327 |
| Size | 20 | 20 | 220 |
(A)11: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CCTCTCACCCCAAATGTCCC | TTGCTGGTCTTCGGAGTGTC | Start: 2987 |
| Tm | 60.034 | 59.966 | End: 3117 |
| Size | 20 | 20 | 131 |
| Primer 2 details |
|---|
| Sequence | GACACTCCGAAGACCAGCAA | CATTTTGGGGCAGTCAACCG | Start: 3098 |
| Tm | 59.966 | 60.038 | End: 3348 |
| Size | 20 | 20 | 251 |
| Primer 3 details |
|---|
| Sequence | TCCCCCTTACCCCGAAAGAT | TTGCTGGTCTTCGGAGTGTC | Start: 2958 |
| Tm | 59.955 | 59.966 | End: 3117 |
| Size | 20 | 20 | 160 |
| Primer 4 details |
|---|
| Sequence | TGCCGTGTGAAGCACAAAAG | TGCTTTGAACTGTTGCGAGC | Start: 4043 |
| Tm | 59.9 | 59.971 | End: 4180 |
| Size | 20 | 20 | 138 |
| Primer 5 details |
|---|
| Sequence | GATCCCCTTTGCACGTCTGA | GAACAGAGCATGCTTCAGCG | Start: 2108 |
| Tm | 60.036 | 59.903 | End: 2327 |
| Size | 20 | 20 | 220 |
(A)11: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CCTCTCACCCCAAATGTCCC | TTGCTGGTCTTCGGAGTGTC | Start: 2987 |
| Tm | 60.034 | 59.966 | End: 3117 |
| Size | 20 | 20 | 131 |
| Primer 2 details |
|---|
| Sequence | GACACTCCGAAGACCAGCAA | CATTTTGGGGCAGTCAACCG | Start: 3098 |
| Tm | 59.966 | 60.038 | End: 3348 |
| Size | 20 | 20 | 251 |
| Primer 3 details |
|---|
| Sequence | TCCCCCTTACCCCGAAAGAT | TTGCTGGTCTTCGGAGTGTC | Start: 2958 |
| Tm | 59.955 | 59.966 | End: 3117 |
| Size | 20 | 20 | 160 |
| Primer 4 details |
|---|
| Sequence | TGCCGTGTGAAGCACAAAAG | TGCTTTGAACTGTTGCGAGC | Start: 4043 |
| Tm | 59.9 | 59.971 | End: 4180 |
| Size | 20 | 20 | 138 |
| Primer 5 details |
|---|
| Sequence | GATCCCCTTTGCACGTCTGA | GAACAGAGCATGCTTCAGCG | Start: 2108 |
| Tm | 60.036 | 59.903 | End: 2327 |
| Size | 20 | 20 | 220 |
(GAA)5: Primer 1 details | | Primer Characteristics | Forward Primer | Reverse Primer | Product Details |
| Sequence | CCTCTCACCCCAAATGTCCC | TTGCTGGTCTTCGGAGTGTC | Start: 2987 |
| Tm | 60.034 | 59.966 | End: 3117 |
| Size | 20 | 20 | 131 |
| Primer 2 details |
|---|
| Sequence | GACACTCCGAAGACCAGCAA | CATTTTGGGGCAGTCAACCG | Start: 3098 |
| Tm | 59.966 | 60.038 | End: 3348 |
| Size | 20 | 20 | 251 |
| Primer 3 details |
|---|
| Sequence | TCCCCCTTACCCCGAAAGAT | TTGCTGGTCTTCGGAGTGTC | Start: 2958 |
| Tm | 59.955 | 59.966 | End: 3117 |
| Size | 20 | 20 | 160 |
| Primer 4 details |
|---|
| Sequence | TGCCGTGTGAAGCACAAAAG | TGCTTTGAACTGTTGCGAGC | Start: 4043 |
| Tm | 59.9 | 59.971 | End: 4180 |
| Size | 20 | 20 | 138 |
| Primer 5 details |
|---|
| Sequence | GATCCCCTTTGCACGTCTGA | GAACAGAGCATGCTTCAGCG | Start: 2108 |
| Tm | 60.036 | 59.903 | End: 2327 |
| Size | 20 | 20 | 220 |
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