| S.No. | lncRNA id | INGC | Start Pos | End Pos | Length | CPC index | IRSOM Accuracy Score | FPKM Value | MFE | Type of SSR | lncRNA's Target gene | lncRNA's Target Function | Sequence |
|---|
| 2551 | Ahy_lnc_2526 | JPXE020000 | 417922 | 417711 | 212 | -1.15815 | 0.992824 | 3.57 | 133.1 | NA | AH019184-RA | CONSTANS-like 4 | Sequence |
| 2552 | Ahy_lnc_2583 | JPXE020000 | 69775 | 69500 | 276 | -1.37614 | 0.984597 | 5.87 | 248.9 | NA | AH023777-RA | Ankyrin repeat family protein | Sequence |
| 2553 | Ahy_lnc_2682 | JPXE020000 | 284534 | 284785 | 308 | -1.18905 | 0.995347 | 0 | 109.1 | NA | NA | NA | Sequence |
| 2554 | Ahy_lnc_2683 | JPXE020000 | 108100 | 107854 | 376 | -1.03974 | 0.915211 | 0 | 102.8 | NA | NA | NA | Sequence |
| 2555 | Ahy_lnc_2684 | JPXE020000 | 108100 | 107854 | 377 | -1.0405 | 0.901608 | 0 | 119.8 | NA | NA | NA | Sequence |
| 2556 | Ahy_lnc_0096 | JPXE020001 | 13605 | 13838 | 238 | -1.46821 | 0.996658 | 2.98 | 130 | NA | AH021877-RA | FKBP-like peptidyl-prolyl cis-trans isomerase family protein | Sequence |
| 2557 | Ahy_lnc_0137 | JPXE020001 | 21940 | 22715 | 776 | -1.03914 | 0.887901 | 5.17 | 127 | di nucleotide | AH021843-RA | Aldolase superfamily protein | Sequence |
| 2558 | Ahy_lnc_0206 | JPXE020001 | 13987 | 14255 | 269 | -1.48714 | 0.973976 | 1.62 | 146.4 | NA | NA | NA | Sequence |
| 2559 | Ahy_lnc_0454 | JPXE020001 | 28563 | 29000 | 438 | -1.38954 | 0.940032 | 4.6 | 160.4 | NA | AH019376-RA | thioredoxin 2 | Sequence |
| 2560 | Ahy_lnc_0593 | JPXE020001 | 32276 | 32636 | 372 | -1.34682 | 0.930485 | 0.95 | 88.7 | NA | NA | NA | Sequence |
| 2561 | Ahy_lnc_0690 | JPXE020001 | 17386 | 17795 | 673 | -1.2351 | 0.887612 | 3.73 | 116 | NA | NA | NA | Sequence |
| 2562 | Ahy_lnc_0692 | JPXE020001 | 17387 | 17795 | 720 | -1.35925 | 0.888809 | 9.71 | 174.7 | NA | NA | NA | Sequence |
| 2563 | Ahy_lnc_0727 | JPXE020001 | 26703 | 26857 | 544 | -1.12169 | 0.951947 | 1.27 | 81.7 | NA | NA | NA | Sequence |
| 2564 | Ahy_lnc_0774 | JPXE020001 | 24482 | 24007 | 553 | -1.15362 | 0.987731 | 1.38 | 187.6 | NA | AH019378-RA | CLP-similar protein 3 | Sequence |
| 2565 | Ahy_lnc_0802 | JPXE020001 | 16775 | 16563 | 332 | -1.18575 | 0.988486 | 92.33 | 130.5 | NA | NA | NA | Sequence |
| 2566 | Ahy_lnc_0904 | JPXE020001 | 38333 | 38023 | 319 | -1.18932 | 0.979181 | 1.39 | 97.7 | NA | NA | NA | Sequence |
| 2567 | Ahy_lnc_1298 | JPXE020001 | 2131 | 2482 | 402 | -1.11135 | 0.877542 | 2.16 | 88.8 | NA | AH018763-RA | RING/U-box superfamily protein | Sequence |
| 2568 | Ahy_lnc_1651 | JPXE020001 | 11706 | 12057 | 352 | -1.11389 | 0.905622 | 1.44 | 95.7 | NA | AH019275-RA | HAL3-like protein A | Sequence |
| 2569 | Ahy_lnc_1743 | JPXE020001 | 1327 | 1038 | 293 | -1.08088 | 0.974147 | 19.66 | 99.1 | NA | AH019131-RA | tRNA/rRNA methyltransferase (SpoU) family protein | Sequence |
| 2570 | Ahy_lnc_1846 | JPXE020001 | 30658 | 30239 | 420 | -1.29048 | 0.989093 | 5.95 | 118.6 | NA | AH021718-RA | lipid transfer protein 2 | Sequence |
| 2571 | Ahy_lnc_2101 | JPXE020001 | 5797 | 5394 | 403 | -1.34069 | 0.96132 | 1.88 | 91.3 | NA | AH023820-RA | 20S proteasome alpha subunit F2 | Sequence |
| 2572 | Ahy_lnc_2422 | JPXE020001 | 1720 | 1432 | 294 | -1.26188 | 0.878636 | 2.36 | 133.6 | tri nucleotide | AH018456-RA | DNAJ heat shock N-terminal domain-containing protein | Sequence |
| 2573 | Ahy_lnc_2675 | JPXE020001 | 45545 | 45665 | 219 | -1.02531 | 0.879095 | 0 | 108.8 | NA | NA | NA | Sequence |
| 2574 | Ahy_lnc_0072 | JPXE020002 | 9166 | 9353 | 254 | -1.19433 | 0.859008 | 1.17 | 86.5 | NA | NA | NA | Sequence |
| 2575 | Ahy_lnc_0328 | JPXE020002 | 23745 | 23956 | 242 | -1.00618 | 0.934438 | 4.05 | 89.7 | NA | AH018613-RA | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain | Sequence |
| 2576 | Ahy_lnc_0424 | JPXE020002 | 21986 | 22371 | 689 | -1.17206 | 0.908531 | 3.68 | 81.1 | NA | NA | NA | Sequence |
| 2577 | Ahy_lnc_1074 | JPXE020002 | 964 | 732 | 233 | -1.45653 | 0.986381 | 13.65 | 95.1 | NA | NA | NA | Sequence |
| 2578 | Ahy_lnc_1105 | JPXE020002 | 8785 | 8463 | 325 | -1.30919 | 0.995602 | 2.64 | 84.7 | NA | AH016114-RA | alpha-vacuolar processing enzyme | Sequence |
| 2579 | Ahy_lnc_1555 | JPXE020002 | 828 | 1062 | 236 | -1.15057 | 0.990571 | 4.71 | 178.5 | NA | AH016761-RA | Protein of unknown function (DUF668) | Sequence |
| 2580 | Ahy_lnc_1567 | JPXE020002 | 28328 | 28489 | 265 | -1.10791 | 0.971387 | 5.17 | 110 | NA | NA | NA | Sequence |
| 2581 | Ahy_lnc_1619 | JPXE020002 | 24035 | 24398 | 364 | -1.13644 | 0.988531 | 6.34 | 134.6 | NA | AH020969-RA | vernalization5/VIN3-like | Sequence |
| 2582 | Ahy_lnc_2283 | JPXE020002 | 16071 | 16192 | 229 | -1.20671 | 0.98862 | 3.84 | 88.3 | NA | NA | NA | Sequence |
| 2583 | Ahy_lnc_0275 | JPXE020003 | 4873 | 4624 | 388 | -1.01362 | 0.928529 | 11.63 | 84.9 | NA | NA | NA | Sequence |
| 2584 | Ahy_lnc_0772 | JPXE020003 | 3725 | 3495 | 230 | -1.11423 | 0.986073 | 5.59 | 117.1 | NA | AH018389-RA | Mitochondrial substrate carrier family protein | Sequence |
| 2585 | Ahy_lnc_0773 | JPXE020003 | 13070 | 12770 | 302 | -1.38301 | 0.965594 | 3.25 | 175.3 | NA | AH018389-RA | Mitochondrial substrate carrier family protein | Sequence |
| 2586 | Ahy_lnc_0775 | JPXE020003 | 15163 | 14762 | 395 | -1.12721 | 0.961623 | 5.68 | 182.8 | NA | AH018817-RA | Stress induced protein | Sequence |
| 2587 | Ahy_lnc_1102 | JPXE020003 | 18218 | 17780 | 439 | -1.43014 | 0.980727 | 8.66 | 89.1 | NA | AH018832-RA | ubiquitin activating enzyme 2 | Sequence |
| 2588 | Ahy_lnc_2130 | JPXE020003 | 4353 | 3694 | 661 | -1.45417 | 0.976627 | 7.76 | 111 | NA | AH018663-RA | osmotin 34 | Sequence |
| 2589 | Ahy_lnc_2588 | JPXE020003 | 16946 | 16216 | 734 | -1.06525 | 0.975416 | 1.57 | 80.3 | NA | AH019276-RA | expansin A8 | Sequence |
| 2590 | Ahy_lnc_0737 | JPXE020004 | 4242 | 3941 | 302 | -1.20452 | 0.986396 | 10.3 | 201 | NA | NA | NA | Sequence |
| 2591 | Ahy_lnc_1789 | JPXE020004 | 11973 | 12300 | 464 | -1.50694 | 0.993689 | 1.07 | 86.4 | NA | AH011632-RA | pfkB-like carbohydrate kinase family protein | Sequence |
| 2592 | Ahy_lnc_0688 | JPXE020005 | 3967 | 4403 | 534 | -1.23926 | 0.969028 | 0.68 | 92.2 | NA | NA | NA | Sequence |
| 2593 | Ahy_lnc_1622 | JPXE020005 | 1167 | 955 | 213 | -1.16266 | 0.971929 | 6.84 | 86.8 | NA | AH018725-RA | Nucleotide-sugar transporter family protein | Sequence |
| 2594 | Ahy_lnc_0938 | JPXE020006 | 6122 | 5856 | 269 | -1.03289 | 0.982581 | 3.24 | 166.9 | NA | NA | NA | Sequence |
| 2595 | Ahy_lnc_1292 | JPXE020006 | 9005 | 9228 | 224 | -1.51364 | 0.986057 | 4.51 | 105.7 | NA | NA | NA | Sequence |
| 2596 | Ahy_lnc_2280 | JPXE020006 | 574 | 810 | 238 | -1.52351 | 0.990779 | 292.79 | 93.8 | NA | AH018310-RA | Protein of unknown function (DUF1639) | Sequence |
| 2597 | Ahy_lnc_2503 | JPXE020006 | 4996 | 5195 | 206 | -1.18092 | 0.991692 | 9.38 | 81.3 | NA | NA | NA | Sequence |
| 2598 | Ahy_lnc_1087 | JPXE020007 | 8473 | 8727 | 256 | -1.42179 | 0.989464 | 5.03 | 87.8 | NA | NA | NA | Sequence |
| 2599 | Ahy_lnc_1266 | JPXE020007 | 6569 | 6273 | 297 | -1.34246 | 0.992054 | 0.6 | 109.9 | NA | AH018807-RA | SELT-like protein precursor | Sequence |
| 2600 | Ahy_lnc_1611 | JPXE020007 | 5328 | 5524 | 251 | -1.31917 | 0.976883 | 1.15 | 334.57 | NA | AH018208-RA | cation-chloride co-transporter 1 | Sequence |
| 2601 | Ahy_lnc_1626 | JPXE020008 | 2697 | 2963 | 299 | -1.25111 | 0.987067 | 2.79 | 89.9 | NA | AH018924-RA | C2 calcium/lipid-binding plant phosphoribosyltransferase family protein | Sequence |
| 2602 | Ahy_lnc_1880 | JPXE020008 | 1501 | 1911 | 443 | -1.16974 | 0.967323 | 3.81 | 92.8 | NA | NA | NA | Sequence |
| 2603 | Ahy_lnc_1980 | JPXE020008 | 345 | 622 | 277 | -1.42599 | 0.980499 | 0.72 | 87.6 | NA | NA | NA | Sequence |
| 2604 | Ahy_lnc_2681 | JPXE020008 | 2209 | 2418 | 210 | -1.21416 | 0.996346 | 0 | 141.5 | NA | NA | NA | Sequence |
| 2605 | Ahy_lnc_0119 | JPXE020009 | 3785 | 4067 | 283 | -1.26931 | 0.99472 | 10.05 | 80.6 | NA | NA | NA | Sequence |
| 2606 | Ahy_lnc_0643 | JPXE020009 | 6158 | 6397 | 240 | -1.26153 | 0.989693 | 2.83 | 125.7 | NA | NA | NA | Sequence |
| 2607 | Ahy_lnc_0785 | JPXE020009 | 1851 | 2125 | 322 | -1.08609 | 0.989625 | 117.8 | 229.8 | NA | AH019182-RA | CHY-type/CTCHY-type/RING-type Zinc finger protein | Sequence |
| 2608 | Ahy_lnc_2265 | JPXE020009 | 3311 | 3092 | 222 | -1.13646 | 0.994377 | 4.83 | 83.4 | NA | AH018353-RA | Serine carboxypeptidase S28 family protein | Sequence |
| 2609 | Ahy_lnc_2320 | JPXE020009 | 3423 | 3194 | 230 | -1.10002 | 0.963631 | 3.72 | 81 | NA | AH018196-RA | Polyketide cyclase/dehydrase and lipid transport superfamily protein | Sequence |
| 2610 | Ahy_lnc_0776 | JPXE020010 | 1042 | 673 | 424 | -1.14526 | 0.974591 | 0.59 | 141.7 | NA | AH015850-RA | alpha/beta-Hydrolases superfamily protein | Sequence |
| 2611 | Ahy_lnc_0777 | JPXE020010 | 1074 | 673 | 395 | -1.11744 | 0.930527 | 0.55 | 159.5 | NA | AH018284-RA | Ribosomal protein L23/L15e family protein | Sequence |
| 2612 | Ahy_lnc_1125 | JPXE020010 | 5579 | 5316 | 392 | -1.32865 | 0.993516 | 70.14 | 169.8 | NA | AH019235-RA | Shaker pollen inward K+ channel | Sequence |
| 2613 | Ahy_lnc_0180 | JPXE020011 | 2338 | 2113 | 226 | -1.09507 | 0.992333 | 19 | 123.1 | NA | AH018804-RA | phosducin-like protein 3 homolog | Sequence |
| 2614 | Ahy_lnc_2535 | JPXE020013 | 3428 | 3668 | 429 | -1.07985 | 0.885665 | 23.57 | 180.5 | NA | AH018456-RA | DNAJ heat shock N-terminal domain-containing protein | Sequence |
| 2615 | Ahy_lnc_1180 | JPXE020014 | 1806 | 1447 | 360 | -1.36497 | 0.994594 | 4.58 | 102.2 | NA | NA | NA | Sequence |
| 2616 | Ahy_lnc_2570 | JPXE020014 | 104 | 837 | 734 | -1.37845 | 0.866259 | 9.36 | 88.9 | NA | AH019313-RA | microfibrillar-associated protein-related | Sequence |
MFE: Minimum free energy;