Retrive data

miRNA INFORMATION

S.No miRNAid INGC Start Pos End Pos Sequence(5'-3') GC% miRNA Length *MFE *MFEI miRNA's target gene miRNA's Target Function type of SSR
1 ahy-mir9761 CM025923.1 21092015 21092158 ATAGATCCTGAAGGTCGAGGAT 43.48 23 -60.5 0.644 AH016549-RA CLP protease proteolytic subunit 3 NA
2 ahy-mir-129b-3p CM025923.1 9316110 9316197 AAGTTGTTCTTTAAGGCTTCCT 34.79 23 -48.1 0.643 AH013289-RA RNA-binding (RRM/RBD/RNP motifs) family protein NA
3 ahy-mir482x CM025923.1 4156354 4156149 GTAATTCGATTGAGAAACTGAA 30.44 23 -43 0.657 AH003309-RA 0 tri nucleotide
4 ahy-mir-7382-3p CM025923.1 8553746 8553893 ATGAGAAGTTTCTTATCGTCTT 30.44 23 -41.7 0.637 AH009153-RA 0 NA
5 ahy-mir1101-3p CM025923.1 8391927 8391777 GTTTCAGAGAATGCTTAAGCTT 34.79 23 -48 0.633 AH013999-RA SPOC domain / Transcription elongation factor S-II protein NA
6 ahy-mir-2702-5p CM025923.1 5097752 5097579 TCTGGAAAATGGAAATATGTGG 34.79 23 -37.3 0.627 AH012981-RA Zn-dependent exopeptidases superfamily protein NA
7 ahy-mir-7968-5p CM025923.1 21250845 21250717 AGGGTGAATCTGAACCAGTAAA 39.14 23 -48.7 0.625 AH001284-RA ARM repeat superfamily protein NA
8 ahy-mir-11913 CM025923.1 1933687 1933526 CCTTGCAGTTGTTTGCAAACAG 43.48 23 -59.3 0.623 AH006822-RA methyltransferase 1 NA
9 ahy-mir-5348-5p CM025923.1 10680354 10680509 TTTGAAGTTGAGACTAGTGGAG 39.14 23 -52.3 0.622 AH023531-RA Protein of unknown function (DUF155) NA
10 ahy-mir078 CM025923.1 7793220 7793006 CTAGAGATATCTAGCCTGGTCG 47.83 23 -47.5 0.621 AH007251-RA Zinc finger (CCCH-type) family protein NA
11 ahy-mir079 CM025923.1 8453217 8453371 ACCTCTATAGGAGTATCGTTCA 39.14 23 -41.4 0.619 AH013223-RA with no lysine (K) kinase 4 NA
12 ahy-mir-212-5p CM025923.1 7075140 7075361 TATGCAGTAAGCAGTTTTAGTC 34.79 23 -46.7 0.616 AH019089-RA ARM repeat superfamily protein NA
13 ahy-mir-12377-3p CM025923.1 20851873 20852001 TTTGACAAAGACAGAAGGGACT 39.14 23 -39.2 0.615 AH020475-RA RECA homolog 3 NA
14 ahy-mir084 CM025923.1 5300702 5300789 AAACTTGAAGTTGGCTTTACCT 34.79 23 -46.6 0.615 AH013004-RA DENN (AEX-3) domain-containing protein NA
15 ahy-mir-5408a-5p CM025923.1 20327545 20327435 TTTAAGCATTATGATCCTGAGA 30.44 23 -40.7 0.613 AH011196-RA Wall-associated kinase family protein NA
16 ahy-mir088 CM025923.1 1592577 1592428 CCCAGACCCTAATCATAGTTTT 39.14 23 -52.7 0.612 AH021604-RA 0 tri nucleotide
17 ahy-mir5745a CM025923.1 2703598 2703662 TGAAGATGATGTGTTGCCTGAT 39.14 23 -51.5 0.612 AH008075-RA exostosin family protein NA
18 ahy-mir6291b CM025923.1 17691053 17690839 TTATGCGGTTGGTATAAAAAAG 30.44 23 -39.8 0.608 AH020338-RA Tubulin binding cofactor C domain-containing protein NA
19 ahy-mir-10464-5p CM025924.1 20759099 20759256 GTGTTCAATTGCAGTCCATAGA 39.14 23 -63.4 1.183 AH008037-RA UDP-Glycosyltransferase superfamily protein NA
20 ahy-mir-9933 CM025924.1 12768283 12768423 AAAAGTATCAACCATGACTACC 34.79 23 -52.8 1.077 AH008874-RA ARM repeat superfamily protein NA
21 ahy-mir-1992-3p CM025924.1 21045705 21045919 AGTTAATCAGTGGTATAACTCT 30.44 23 -49.9 0.953 AH020583-RA Small nuclear ribonucleoprotein family protein NA
22 ahy-mir10208-5p CM025924.1 15135036 15135173 TGGTTGGGAGCATCTGTTTTAG 43.48 23 -57.8 0.917 AH001957-RA 0 NA
23 ahy-mir-9421 CM025924.1 15904145 15904363 TAGATCAATGGCAGATAGAAAA 30.44 23 -54.5 0.821 AH013052-RA Leucine-rich receptor-like protein kinase family protein mono nucleotide
24 ahy-mir-2181 CM025924.1 22038511 22038304 AAGTATGCTGTTAAGCGTATGA 34.79 23 -50.3 0.846 AH014963-RA Saposin-like aspartyl protease family protein NA
25 ahy-mir011 CM025924.1 8365093 8365314 CTCATTGAATGTATGTTGGGTC 39.14 23 -61.1 0.831 AH014200-RA 0 NA
26 ahy-mir8170-5p CM025924.1 1218684 1218473 CTTGCTTATCGATCAGCTTGCA 43.48 23 -61.7 0.825 AH021200-RA 0 NA
27 ahy-mir-3034 CM025924.1 9587798 9588012 TGGACAATGACAATTGGGAAGT 39.14 23 -70.4 0.81 AH016731-RA ARM repeat superfamily protein NA
28 ahy-mir017 CM025924.1 567245 567361 CAGTAAGGGGCGCAATCCAGGT 56.53 23 -58.9 0.808 AH019908-RA phosphate transporter 1;1 NA
29 ahy-mir-581 CM025924.1 12612062 12611841 TTGATCAGTTTTCTGATCTAGA 30.44 23 -53.3 0.792 AH020537-RA Leucine-rich receptor-like protein kinase family protein NA
30 ahy-mir021 CM025924.1 17703351 17703175 TGGGTGATTTAAGCCTAATATG 34.79 23 -59.2 0.792 AH002811-RA phytochrome kinase substrate-related NA
31 ahy-mir-8-5p CM025924.1 10040937 10040825 TCATTAAAGACTAATACTTGCC 30.44 23 -50.8 0.776 AH014315-RA TIFY domain/Divergent CCT motif family protein NA
32 ahy-mir1157-5p CM025924.1 9282814 9282940 AAGATTCATATAGCGGCTAACA 34.79 23 -54 0.754 AH014264-RA Integrase-type DNA-binding superfamily protein NA
33 ahy-mir-367-5p CM025924.1 17052083 17051928 TTCATATGCAAGAAGCTACAGC 39.14 23 -40.2 0.744 AH016135-RA Protein kinase family protein with leucine-rich repeat domain NA
34 ahy-mir-2569-3p CM025924.1 21614635 21614850 TCCAAGGAATTTTACCCTTTAA 30.44 23 -45.9 0.739 AH000460-RA 0 NA
35 ahy-mir-9708c-3p CM025924.1 16282186 16282307 TATGAGTGTTAGCATGTATCGC 39.14 23 -63.4 0.733 AH015125-RA Transducin/WD40 repeat-like superfamily protein NA
36 ahy-mir3710i CM025924.1 12647614 12647425 TTTCAGGTTCAAGACTTTGTTT 30.44 23 -48.6 0.733 AH006940-RA purple acid phosphatase 23 NA
37 ahy-mir-3338 CM025924.1 4468773 4468610 TGAAACTTACTTTGATCAGGCT 34.79 23 -55.4 0.731 AH015801-RA Protein of unknown function (DUF1997) NA
38 ahy-mir-3716b-3p CM025924.1 17300860 17301074 GATGTTATTTGAACGTCTAATC 30.44 23 -48.4 0.729 AH015658-RA LYR family of Fe/S cluster biogenesis protein NA
39 ahy-mir-1007-3p CM025924.1 17105816 17106037 AAGCTCAATTTTCAGAAACCGA 34.79 23 -55.3 0.729 AH002047-RA nucleotide transporter 1 NA
40 ahy-mir1024b CM025924.1 12839864 12840011 TCAATGAACTGGTTGGATTTGC 39.14 23 -46.8 0.725 AH008156-RA 0 NA
41 ahy-mir037 CM025924.1 16260644 16260449 CAACTATGATACTTAATCTGAC 30.44 23 -47.2 0.721 AH000681-RA Galactose oxidase/kelch repeat superfamily protein NA
42 ahy-mir-10106-3p CM025924.1 16526229 16526090 GGTCGTACTACATGAATGGAAG 43.48 23 -57.8 0.715 AH019524-RA Ribosomal protein L1p/L10e family NA
43 ahy-mir-7272-5p CM025924.1 22593682 22593577 TCTCTGGTTTTGTTGCAGCCAA 43.48 23 -63 0.714 AH014297-RA sec34-like family protein NA
44 ahy-mir780.2 CM025924.1 13750069 13750286 ACCTTCGATATATTCACGAAGG 39.14 23 -47.3 0.711 AH014428-RA Protein of unknown function (DUF630 and DUF632) NA
45 ahy-mir-3866-3p CM025924.1 22260913 22261129 AATAATAACCGAGTTGGTTCAT 30.44 23 -37.1 0.709 AH014870-RA Heavy metal transport/detoxification superfamily protein NA
46 ahy-mir-3358 CM025924.1 17943900 17943684 CTGAATTTGCGGAGGAGGATGT 47.83 23 -68.2 0.706 AH023720-RA Zn-dependent exopeptidases superfamily protein NA
47 ahy-mir-12402-5p CM025924.1 16081212 16081378 CTCAGCTCATGGTTGATGTTTG 43.48 23 -66.8 0.702 AH006453-RA histidine kinase 1 NA
48 ahy-mir-2b-5p CM025924.1 23157183 23157320 GGCCACACTCAAAGTGGCGCTT 56.53 23 -54.7 0.701 AH004049-RA NA NA
49 ahy-mir-10743 CM025924.1 20950015 20950106 ATGAAGTTCAGCATTGGGAACC 43.48 23 -46 0.701 AH014741-RA O-acetyltransferase family protein NA
50 ahy-mir5825 CM025924.1 24491006 24490920 ACAGGGATCTGATAACCTTTCT 39.14 23 -49 0.692 AH015275-RA Proteasome component (PCI) domain protein NA

MFE: Minimum free energy; MFEI: Minimum free energy index;


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