Retrive data

miRNA INFORMATION

S.No miRNAid INGC Start Pos End Pos Sequence(5'-3') GC% miRNA Length *MFE *MFEI miRNA's target gene miRNA's Target Function type of SSR
1 ahy-mir11475 CM025919.1 18931384 18931597 AGAGTTTGCAATAGGAAAGTAG 34.79 23 -52.2 0.698 AH007512-RA F-box family protein tri nucleotide
2 ahy-mir-200a-1-5p CM025919.1 22915568 22915416 TATGCATCTTACAAGGGATGTA 34.79 23 -49.4 0.661 AH019002-RA 0 NA
3 ahy-mir1527 CM025919.1 23124574 23124789 AGCACTTACAAAACCCAAAAAG 34.79 23 -49.9 0.658 AH021177-RA Uroporphyrinogen decarboxylase NA
4 ahy-mir-9354 CM025919.1 2094669 2094883 AGTGTTCTTCTTCCGAATATTG 34.79 23 -48.8 0.653 AH012410-RA cytochrome P450, family 715, subfamily A, polypeptide 1 NA
5 ahy-mir-9051 CM025919.1 3577905 3577791 ATAGAAGTGAACTCTGCTACAT 34.79 23 -51.3 0.686 AH006823-RA Zinc finger C-x8-C-x5-C-x3-H type family protein tri nucleotide
6 ahy-mir067 CM025919.1 5954389 5954172 ACAGCAACAACACACCGTTCAC 47.83 23 -67.2 0.642 AH000451-RA Heat shock protein 70 (Hsp 70) family protein NA
7 ahy-mir6221-5p CM025919.1 17626644 17626763 TAAGCAGGGGCAAGACCTTATT 43.48 23 -59.9 0.641 AH012767-RA PHE ammonia lyase 1 NA
8 ahy-mir069 CM025919.1 19753102 19753271 AAGGGCACTCATGGTAAATGCG 47.83 23 -65.6 0.635 AH022859-RA Protein kinase superfamily protein NA
9 ahy-mir6032-5p CM025919.1 2314020 2314235 TGTTGGAGTATCAACAGCTATG 39.14 23 -53.4 0.632 AH006716-RA calmodulin binding NA
10 ahy-mir8607 CM025919.1 2126166 2126246 TGGTAATTCTAGAAGGGACATT 34.79 23 -47.2 0.631 AH020455-RA response regulator 9 NA
11 ahy-mir-7878-3p CM025919.1 12420835 12420644 TGATCATGAAGGTAGCTTAAGG 39.14 23 -52.7 0.624 AH017198-RA Protein kinase superfamily protein NA
12 ahy-mir-40h-5p CM025919.1 6840792 6840637 AGAGTGATTCTTGTTTGCTTAT 30.44 23 -38.9 0.62 AH006184-RA Tetratricopeptide repeat (TPR)-like superfamily protein NA
13 ahy-mir7810 CM025919.1 7975252 7975469 TGGCTTTAACCAGAAAACTATT 30.44 23 -41.1 0.619 AH013779-RA thiaminC NA
14 ahy-mir-10314 CM025920.1 11423096 11423310 GTGTATGAACCAAGGCGGAAAT 43.48 23 -60.2 0.975 AH019374-RA alpha/beta-Hydrolases superfamily protein NA
15 ahy-mir1534 CM025920.1 6278367 6278584 ATACTAGTTACCCAAATTTTGC 30.44 23 -58.7 0.923 AH013473-RA O-fucosyltransferase family protein NA
16 ahy-mir006 CM025920.1 21879897 21879772 ATTACATGATCGGTGGCTCTTC 43.48 23 -54.2 0.884 AH022592-RA peroxisome 1 NA
17 ahy-mir-7410-5p CM025920.1 18917106 18917323 AAACTTCAGCAGACAGAGCGGG 52.18 23 -62.1 0.863 AH009321-RA multidrug resistance-associated protein 9 NA
18 ahy-mir-8324-3p CM025920.1 21438168 21438045 TAATCCTCTAACGAGGATCAAA 34.79 23 -56.4 0.863 AH016444-RA Glucose-1-phosphate adenylyltransferase family protein NA
19 ahy-mir7990b CM025920.1 8048864 8048749 ATGAATTGAAAATTCACCGAAG 30.44 23 -55.5 0.837 AH015633-RA 0 NA
20 ahy-mir012 CM025920.1 3655638 3655423 ATAAAGGATGTCAAGTTGCAAA 30.44 23 -54.1 0.827 AH015821-RA galacturonosyltransferase 13 NA
21 ahy-mir-10a-3p CM025920.1 23954825 23954949 TAATTGGAAAATTGGTGTCTGG 34.79 23 -51.4 0.687 AH011225-RA haloacid dehalogenase-like hydrolase family protein mono nucleotide
22 ahy-mir2870 CM025920.1 4593476 4593648 TTACTCTTAATGAGTTTGGGGA 34.79 23 -50.7 0.678 AH014492-RA alpha/beta-Hydrolases superfamily protein mono nucleotide
23 ahy-mir399b-5p CM025920.1 17728865 17728649 TCCTAAAAAAAGGAGAGAAGTT 30.44 23 -50.6 0.784 AH003976-RA Uncharacterised protein family (UPF0497) NA
24 ahy-mir-3310 CM025920.1 1920069 1920286 CCAAACCCTTTACAAGCTGCAT 43.48 23 -71.5 0.761 AH010626-RA RED family protein NA
25 ahy-mir-551-3p CM025920.1 6616114 6616188 CCATTGCCTGACCAAGGATGGA 52.18 23 -49.9 0.753 AH007822-RA Nascent polypeptide-associated complex (NAC), alpha subunit family protein NA
26 ahy-mir083 CM025920.1 183321 183407 CTTTACCCAAAAAGGGTAGTTT 34.79 23 -46.3 0.616 AH011791-RA Tetratricopeptide repeat (TPR)-like superfamily protein tetra nucleotide
27 ahy-mir-12327-3p CM025920.1 6851795 6851579 GAGAGAGAAAGAGAGAAAAACT 34.79 23 -56.5 0.745 AH010876-RA protein phosphatase 2A-4 NA
28 ahy-mir-2507b-3p CM025920.1 4649124 4648939 AAATTTTGCACGTTTTCTTCCC 34.79 23 -55.4 0.741 AH016113-RA MATE efflux family protein NA
29 ahy-mir-509d-5p CM025920.1 20104548 20104769 CTTTTTCAAGATGCAATCATCC 34.79 23 -53.51 0.95 AH018567-RA Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein tri nucleotide
30 ahy-mir-449b-5p CM025920.1 2294585 2294800 CAAGTGATTCTACACTTACAAA 30.44 23 -40.2 0.734 AH008531-RA GPI transamidase component family protein / Gaa1-like family protein NA
31 ahy-mir036 CM025920.1 4758409 4758553 GTATAGAGTTGGAGTTATTCAT 30.44 23 -30.3 0.721 AH021803-RA 0 NA
32 ahy-mir041 CM025920.1 2946566 2946439 CTTCTTTATCAGAGCAGTCGGA 43.48 23 -54.9 0.709 AH023688-RA Prolyl oligopeptidase family protein NA
33 ahy-mir-3479a-3p CM025920.1 23954735 23954949 TCTTCTTTTGGTGAAAGTTTCA 30.44 23 -45.6 0.697 AH016463-RA botrytis-induced kinase1 NA
34 ahy-mir-12363-3p CM025920.1 887088 887263 TTTGTCTTTTGAAAGCGAAGAA 30.44 23 -52.4 0.801 AH001947-RA MUTM homolog-1 tri nucleotide
35 ahy-mir-729-3p CM025920.1 2311062 2311277 CAAGCGCTTTATGGGTATGATG 43.48 23 -54 0.786 AH004087-RA tRNA arginine adenosine deaminase tri nucleotide
36 ahy-mir-196b-3p CM025920.1 23794877 23794769 TTGTCGTGCTGTATGATAGTTT 34.79 23 -52.5 0.692 AH009686-RA putative recombination initiation defects 3 NA
37 ahy-mir-7334-5p CM025920.1 19199054 19198840 CAACGAAACTCTGATGAATTTC 34.79 23 -52.3 0.69 AH006792-RA guanylate kinase NA
38 ahy-mir-10018-3p CM025920.1 548464 548682 ACTGACCAGCTCCAGACACCAC 56.53 23 -74.5 0.686 AH008361-RA growth-regulating factor 1 NA
39 ahy-mir-234 CM025920.1 527340 527457 ATTGGGTTGGCATTCTTGGGGG 52.18 23 -46.8 0.685 AH000024-RA Transcription elongation factor (TFIIS) family protein NA
40 ahy-mir417 CM025920.1 7758085 7758300 AAATTTGTTCGAGAAAGATGCT 30.44 23 -42.1 0.736 AH006293-RA ribosomal protein large subunit 27 tri nucleotide
41 ahy-mir-3347b CM025920.1 7555027 7554809 CATCATTGATCGGTATGGAAGC 43.48 23 -63 0.671 AH013014-RA myosin XI B NA
42 ahy-mir-609 CM025920.1 9196735 9196950 AAATCAGTGCATGAGAGCAACA 39.14 23 -38.9 0.663 AH004888-RA Regulator of chromosome condensation (RCC1) family protein NA
43 ahy-mir-11213-5p CM025920.1 20608003 20607797 TCATCCAGTGTAAGGTTATCTT 34.79 23 -50.1 0.661 AH001327-RA Tetratricopeptide repeat (TPR)-like superfamily protein NA
44 ahy-mir2652m CM025920.1 21264574 21264760 TTGATTACTTTGTGCATAAGGG 34.79 23 -49.4 0.661 AH009491-RA RNA-binding (RRM/RBD/RNP motifs) family protein NA
45 ahy-mir-1323-3p CM025920.1 20008407 20008610 TTAGTAAACCCAGTTTTGGATT 30.44 23 -43.2 0.66 AH001381-RA Homeodomain-like transcriptional regulator NA
46 ahy-mir-742-3p CM025920.1 103876 103661 TGATATGTAACCATGTTGGGTC 39.14 23 -54.4 0.656 AH005016-RA sec7 domain-containing protein NA
47 ahy-mir-3851k-5p CM025920.1 14858800 14858683 AACGGTTGGCAAAAGTAGAATA 34.79 23 -48.7 0.651 AH009157-RA SNARE associated Golgi protein family NA
48 ahy-mir061 CM025920.1 5379229 5379102 GGACATGGGAACTGTTGTTATG 43.48 23 -51.2 0.651 AH021280-RA breast cancer susceptibility1 NA
49 ahy-mir11436d CM025920.1 887088 887263 CTTTTGAAAGCGAAGAATTCTC 34.79 23 -51.6 0.69 AH016419-RA FIZZY-related 3 tri nucleotide
50 ahy-mir-1474 CM025920.1 20053458 20053673 CATATCTGAGGTTGTGAAGCGT 43.48 23 -60.2 0.644 AH010350-RA 0 NA

MFE: Minimum free energy; MFEI: Minimum free energy index;


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