Retrive data

miRNA INFORMATION

S.No miRNAid INGC Start Pos End Pos Sequence(5'-3') GC% miRNA Length *MFE *MFEI miRNA's target gene miRNA's Target Function type of SSR
1 ahy-mir-7373d-3p CM025925.1 6322574 6322476 TTAGCAATAATGCTGGCATGGA 39.14 23 -57.8 0.687 AH015686-RA Ankyrin repeat family protein NA
2 ahy-mir-9369-3p CM025925.1 18729880 18729666 AATTAGCCGAAAGGAGAATTTA 30.44 23 -44.9 0.686 AH015595-RA glycoprotease 1 NA
3 ahy-mir5522 CM025925.1 7565413 7565628 AGATAATCTCCCATTACTATCA 30.44 23 -44.1 0.674 AH015780-RA starch synthase 2 NA
4 ahy-mir-10342 CM025925.1 10300720 10300536 AATCGAAAATGATGGAGAATCA 30.44 23 -44 0.672 AH002045-RA 0 NA
5 ahy-mir-9050 CM025925.1 12286535 12286394 TGTCTTTTGGGTATGCTTCAAT 34.79 23 -49.6 0.663 AH002468-RA proline-rich family protein NA
6 ahy-mir1074 CM025925.1 13247605 13247390 TAGCAACTGTTAGTTGTGGTGG 43.48 23 -53.6 0.663 AH001264-RA photosynthetic electron transfer C NA
7 ahy-mir-4193-5p CM025925.1 9191019 9191151 AATGTTTAACAACTGTGAGGTT 30.44 23 -43.3 0.65 AH001651-RA Calcium-dependent lipid-binding (CaLB domain) family protein NA
8 ahy-mir11011b CM025925.1 10491789 10491602 AAGTTCATCCAATTCCTTCTGG 39.14 23 -54.4 0.647 AH015994-RA Ggamma-subunit 1 NA
9 ahy-mir11492 CM025925.1 1446521 1446307 AGCAATTTGGTTTTATGCCAGG 39.14 23 -43.5 0.628 AH004960-RA beta glucosidase 16 NA
10 ahy-mir-26b-3p CM025925.1 17342136 17342006 AATCTCATGCTGACTACTTGGG 43.48 23 -55.9 0.618 AH001269-RA SET domain protein 2 NA
11 ahy-mir-5412-3p CM025925.1 11890620 11890803 AATCTGAAGTTACCCAGAAATT 30.44 23 -37.4 0.614 AH012991-RA Leucine-rich repeat protein kinase family protein NA
12 ahy-mir1863 CM025925.1 9981412 9981295 TGGATGGTACCATGTTGCTCTT 43.48 23 -57.3 0.61 AH020742-RA P-loop containing nucleoside triphosphate hydrolases superfamily protein NA
13 ahy-mir7764-3p CM025925.1 9142454 9142254 AATGTCTTCTGGGCGTTATGGG 47.83 23 -55.7 0.607 AH012056-RA plastidic pyruvate kinase beta subunit 1 NA
14 ahy-mir-9369-3p CM025925.1 18729880 18729666 CATGACGACAAGCCAAAGAAGA 43.48 23 -42 0.6 AH015595-RA Family of unknown function (DUF716) NA
15 ahy-mir-130d-1-5p CM025926.1 654219 654005 ATTGCAACTTTAATGTTGTTGC 30.44 23 -54.7 1.266 AH011403-RA Tetratricopeptide repeat (TPR)-like superfamily protein NA
16 ahy-mir-9463 CM025926.1 1088023 1087861 TCTTAGATTCAGTAAAGCTTCT 30.44 23 -52.5 1.106 AH010281-RA ubiquitin-specific protease 25 NA
17 ahy-mir-5912a CM025926.1 11255192 11255406 CATTAAAGATGATTCGAACAAG 30.44 23 -51.8 1.084 AH016523-RA Protein of unknown function (DUF3464) NA
18 ahy-mir-3618 CM025926.1 7479553 7479355 ATTAATGAAAAGTCCAGATTGC 30.44 23 -58.4 1.054 AH001931-RA Transducin family protein / WD-40 repeat family protein NA
19 ahy-mir-11619d-5p CM025926.1 4136467 4136253 CGAAAACGATATATTCTTCATG 30.44 23 -61.8 0.958 AH020514-RA DWNN domain, a CCHC-type zinc finger NA
20 ahy-mir-2a-5p CM025926.1 13970541 13970426 CAAGATGCGGCCAATATTGTGA 43.48 23 -59 0.942 AH021589-RA sugar transporter 1 NA
21 ahy-mir-9416 CM025926.1 13920324 13920410 TTGCTTCAACACTTCAAATTGT 30.44 23 -59.8 0.914 AH016313-RA 0 NA
22 ahy-mir1509a CM025926.1 15629521 15629419 ACGGAATTTGTCAAGGAAATTA 30.44 23 -45.5 0.854 AH000464-RA RAD3-like DNA-binding helicase protein NA
23 ahy-mir11313 CM025926.1 11631994 11632193 ATCATCATTCTCCATTCTTTTC 30.44 23 -48.9 0.837 AH017108-RA Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein NA
24 ahy-mir-2742 CM025926.1 10895164 10894947 GGAAATAATCCAATGAAACGCA 34.79 23 -38.7 0.837 AH005885-RA Calcium-dependent lipid-binding (CaLB domain) family protein NA
25 ahy-mir013 CM025926.1 20175298 20175432 AATGAAATTGCCTCCATCATTA 30.44 23 -54 0.825 AH014824-RA SCAR family protein NA
26 ahy-mir016 CM025926.1 19062141 19062358 TTCATCACATCTTGTAAAAGGC 34.79 23 -52 0.808 AH012353-RA Pentatricopeptide repeat (PPR) superfamily protein NA
27 ahy-mir2619b-3p CM025926.1 16620226 16620367 CTCAAAGTTGATTCTTTTGAGA 30.44 23 -51.5 0.787 AH006489-RA ARM repeat superfamily protein NA
28 ahy-mir7808 CM025926.1 8912399 8912525 ACCTCGATTCAGAAACTGGTGG 47.83 23 -67.1 0.784 AH002128-RA ENTH/VHS family protein NA
29 ahy-mir5641 CM025926.1 14948505 14948287 ACCATAAATCTTCTTCCATCTT 30.44 23 -51.3 0.773 AH007231-RA 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein NA
30 ahy-mir8616 CM025926.1 19335229 19335112 GAACCTCTGATAAAATTTGTTC 30.44 23 -50.3 0.769 AH017803-RA 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein NA
31 ahy-mir-2940-3p CM025926.1 16320993 16320778 TATGTGTTTTATCTCCCTTTTC 30.44 23 -50.2 0.767 AH017523-RA dentin sialophosphoprotein-related NA
32 ahy-mir-7386a-3p CM025926.1 12448530 12448451 CTTTATCCACGGTGGAAGGATA 43.48 23 -55.6 0.766 AH010779-RA Tesmin/TSO1-like CXC domain-containing protein NA
33 ahy-mir5373 CM025926.1 15272271 15272491 TTCGAGTCTTTATCTTGATTCT 30.44 23 -49.8 0.761 AH004087-RA tRNA arginine adenosine deaminase NA
34 ahy-mir7707-3p CM025926.1 18516234 18516098 TGATGGCAATATCAGCCATACA 39.14 23 -59.6 0.754 AH015986-RA Adaptor protein complex AP-1, gamma subunit NA
35 ahy-mir171o CM025926.1 13867087 13866872 AAACGTTGGTATGGACCACACT 43.48 23 -48.5 0.754 AH019037-RA G protein alpha subunit 1 NA
36 ahy-mir-511-5p CM025926.1 15992923 15993101 CAGAGTAAAAGACTTGGTTACC 39.14 23 -43.4 0.749 AH001071-RA 0 NA
37 ahy-mir-10456-5p CM025926.1 7433477 7433693 TGCGATATTTATGAATCTCAAG 30.44 23 -49.5 0.746 AH022061-RA importin alpha isoform 1 NA
38 ahy-mir11014 CM025926.1 14083684 14083818 CTACCTCCTATTCATGAAAATT 30.44 23 -47.9 0.732 AH003250-RA heteroglycan glucosidase 1 NA
39 ahy-mir-449a-3p CM025926.1 10266146 10266282 TCTTTATTTGTAGCAGTTGTAC 30.44 23 -47.8 0.72 AH017005-RA Protein kinase superfamily protein NA
40 ahy-mir038 CM025926.1 20415673 20415780 ATGAGGGCATATATTTGGCTTA 34.79 23 -54.7 0.718 AH009431-RA serine-type endopeptidase inhibitors NA
41 ahy-mir-2572-3p CM025926.1 19257700 19257482 TCCTAATGTATCCATTATGAGA 30.44 23 -46.8 0.715 AH017797-RA ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein NA
42 ahy-mir-11658-5p CM025926.1 20163083 20162957 CTAGAGAGATTATTGAGTTTCA 30.44 23 -46.6 0.712 AH003731-RA heat shock factor 4 NA
43 ahy-mir821d CM025926.1 20534899 20535044 TTACAACCACAAAGTTGATGCA 34.79 23 -53.7 0.708 AH000350-RA 0 NA
44 ahy-mir-513a-3p CM025926.1 13285828 13285613 CGGTCTTTCTCAAGATGGTGTT 43.48 23 -57.7 0.851 AH006861-RA RNA-dependent RNA polymerase 2 tri nucleotide
45 ahy-mir-26a-3p CM025926.1 9749682 9749468 AAGTAATCAAGATTGTTACGGA 30.44 23 -46.8 0.705 AH020299-RA 0 NA
46 ahy-mir095 CM025926.1 10830045 10830263 ATGACTTTGTAGAGTTCAGGTC 39.14 23 -46.2 0.703 AH008853-RA Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein NA
47 ahy-mir-9b-3p CM025926.1 10841631 10841705 ATTAGGAAGATCAGCAAGTGAG 39.14 23 -57 0.678 AH017053-RA SUMO activating enzyme 1B NA
48 ahy-mir052 CM025926.1 11474582 11474797 ATGGGGCTTACCATTATGGCAA 43.48 23 -41 0.674 AH013364-RA P-loop containing nucleoside triphosphate hydrolases superfamily protein NA
49 ahy-mir1101-5p CM025926.1 16853628 16853411 AGTAGTTTCGAGAGATTCATCG 39.14 23 -48.8 0.663 AH012079-RA disease resistance family protein / LRR family protein NA
50 ahy-mir-184b-5p CM025926.1 4635800 4635644 CTTTTCAAATTTTACGCTGCTG 34.79 23 -50.6 0.658 AH001954-RA Molecular chaperone Hsp40/DnaJ family protein NA

MFE: Minimum free energy; MFEI: Minimum free energy index;


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