Retrive data

miRNA INFORMATION

S.No miRNAid INGC Start Pos End Pos Sequence(5'-3') GC% miRNA Length *MFE *MFEI miRNA's target gene miRNA's Target Function type of SSR
1 ahy-mir-7565 CM025928.1 16387014 16387194 CTGGCTCAGTTTGAACATCCGA 47.83 23 -50.2 0.669 AH011469-RA Putative glycosyl hydrolase of unknown function (DUF1680) NA
2 ahy-mir-320-5p CM025928.1 11098292 11098506 GAGGTGGAAGAGAAGGCAATAT 43.48 23 -40.5 0.665 AH014555-RA 0 NA
3 ahy-mir-3770-5p CM025928.1 16701365 16701579 ATCAGCATCAAGTGCATTATGG 39.14 23 -55.4 0.659 AH020956-RA PDI-like 2-2 NA
4 ahy-mir062 CM025928.1 16220436 16220653 AAGAGCTATATCATACAACGGC 39.14 23 -35.5 0.648 AH020728-RA Pentatricopeptide repeat (PPR) superfamily protein NA
5 ahy-mir5538 CM025928.1 12565080 12565167 CAGCCTCAGAATCACTTGCTGC 52.18 23 -58.1 0.667 AH007237-RA yeast YAK1-related gene 1 tri nucleotide
6 ahy-mir-963-5p CM025928.1 6366107 6366324 ATCTTGTTAAGAAACACTCTGA 30.44 23 -41.8 0.639 AH009737-RA beta-1,2-xylosyltransferase NA
7 ahy-mir-7385e-5p CM025928.1 7810986 7811125 AGTAGACTATCACTTCATTCGA 34.79 23 -47.1 0.63 AH001454-RA Argonaute family protein NA
8 ahy-mir8787 CM025928.1 12386443 12386329 AGCGATCTCGTCCAAGTAAGAT 43.48 23 -36.2 0.626 AH019950-RB Transcriptional factor B3 family protein NA
9 ahy-mir8552d CM025928.1 15233245 15233425 CTGATCGTTAGTTAACTTCCGG 43.48 23 -37.8 0.639 AH005451-RA ARM repeat superfamily protein tri nucleotide
10 ahy-mir-7371a-5p CM025928.1 18037783 18037863 AAAGATGCTGTGTTAACAAGCA 34.79 23 -46.5 0.622 AH002832-RA Pyridine nucleotide-disulphide oxidoreductase family protein NA
11 ahy-mir2106 CM025928.1 13617452 13617318 CAAGGTTTTCTGGAGCCTCTTT 43.48 23 -47.9 0.619 AH020047-RA Ku80 family protein NA
12 ahy-mir-5955 CM025928.1 2902324 2902488 CGAATTTTGAGTCTTGTCATGG 39.14 23 -52.3 0.619 AH002312-RA ACT-like protein tyrosine kinase family protein NA
13 ahy-mir080 CM025928.1 14976408 14976625 TTTTAGACGGAAAAAAGCGTCT 34.79 23 -46.9 0.619 AH020227-RA Adenine nucleotide alpha hydrolases-like superfamily protein NA
14 ahy-mir7530 CM025928.1 8234412 8234195 TACTTGCATTAAAGAGAGGAAG 34.79 23 -46.8 0.617 AH009364-RA sucrose-proton symporter 2 NA
15 ahy-mir-1481 CM025928.1 18388828 18388613 AATCAGCATCTTCTTTCTTCAT 30.44 23 -40 0.611 AH020557-RA Tic22-like family protein NA
16 ahy-mir6025 CM025928.1 2060243 2060326 CTAGGCTCCAACAATGGAGATG 47.83 23 -62.7 0.607 AH016328-RA 0 NA
17 ahy-mir-100-3p CM025928.1 17397888 17397670 TGAAGAACCACGAAGATGTGTA 39.14 23 -52.3 0.605 AH020450-RA Tetratricopeptide repeat (TPR)-like superfamily protein NA
18 ahy-mir-11584 CM025928.1 12849715 12849931 AATATAAGATTGAGCCTGTCAA 30.44 23 -40 0.603 AH019977-RA nucleoporin 155 NA
19 ahy-mir-10330 CM025928.1 10989917 10990136 ATGTTCTTAGCGAAGGTTGGGC 47.83 23 -63.2 0.601 AH008543-RA Peroxidase superfamily protein NA
20 ahy-mir-759 CM025929.1 10899104 10898917 ATAAATATGGTTTGCACACCTT 30.44 23 -84.9 1.28 AH001955-RA Pre-mRNA-processing-splicing factor NA
21 ahy-mir156g-3p CM025929.1 19441050 19441221 ACTTTCGTTTACTCTCTTCATA 30.44 23 -71 1.19 AH010589-RA Frigida-like protein NA
22 ahy-mir395c-5p CM025929.1 16275313 16275528 TTTGCCCTTTAATGCATCATTT 30.44 23 -54.3 1.115 AH020464-RA lycopene cyclase NA
23 ahy-mir-12310-3p CM025929.1 18681814 18681929 TCTGGGAAAAGACTTCCAATGG 43.48 23 -59 0.956 AH020850-RA Adenine nucleotide alpha hydrolases-like superfamily protein NA
24 ahy-mir007 CM025929.1 13161612 13161769 CTTATCTACTCTAATAAGGGTA 30.44 23 -41.3 0.87 AH022184-RA Cation efflux family protein NA
25 ahy-mir008 CM025929.1 10297742 10297923 CATGAATTTTGAAGCCGTTTTT 30.44 23 -56.6 0.865 AH001442-RA protein phosphatase 5.2 NA
26 ahy-mir014 CM025929.1 6037407 6037488 TGTTGTTTAGATAGTAATGCTC 30.44 23 -53.3 0.822 AH012953-RA spliceosomal protein U1A NA
27 ahy-mir-4100-5p CM025929.1 16322351 16322501 AAGTCTTATGATTGGGTTGACT 34.79 23 -53.4 0.704 AH010958-RA Cysteine proteinases superfamily protein mono nucleotide
28 ahy-mir-10315a CM025929.1 14334028 14334246 CATTGTTTTGAAACACAACGGA 34.79 23 -58.2 0.778 AH021202-RA F-box family protein NA
29 ahy-mir11169-5p CM025929.1 3216417 3216319 GAAGAAGAAGTGAAAAGAAGTA 30.44 23 -34.8 0.742 AH005997-RA 0 NA
30 ahy-mir-7926-3p CM025929.1 14101769 14101984 TGAAATCATGGATAGTATGAAG 30.44 23 -44.6 0.736 AH019000-RA glutathione peroxidase 7 NA
31 ahy-mir-11895 CM025929.1 8621946 8621729 AATGGGAATGCATGAAGCAGCT 43.48 23 -53.7 0.735 AH003041-RA BEL1-like homeodomain 1 NA
32 ahy-mir-11617b-5p CM025929.1 14956772 14956593 GATTACTACTCCATTGATGGCT 39.14 23 -47.5 0.92 AH001304-RA arogenate dehydratase 2 tri nucleotide
33 ahy-mir-8351-3p CM025929.1 17418418 17418202 CAGACGACAGTACCAATAGAAT 39.14 23 -46.9 0.697 AH002771-RA 0 NA
34 ahy-mir-9542a-5p CM025929.1 19317798 19318005 ACATTTGATTAGAATAGGAGGG 34.79 23 -52.1 0.697 AH000386-RA Phototropic-responsive NPH3 family protein NA
35 ahy-mir11536 CM025929.1 18982673 18982456 TCTATTCCAAATCACAATGATC 30.44 23 -45.3 0.692 AH022422-RA dihydrodipicolinate synthase 1 NA
36 ahy-mir395c-5p CM025929.1 16275313 16275528 CAAACCTTGAATTGATTTGAGT 30.44 23 -30.7 0.691 AH020464-RA glycine-rich RNA-binding protein 3 NA
37 ahy-mir8577 CM025929.1 15288308 15288502 GGGATTTATCATCATCTGAATC 34.79 23 -50.8 0.679 AH021280-RA breast cancer susceptibility1 NA
38 ahy-mir056 CM025929.1 17212724 17212807 AAAGATGTCGCCTGTTATAAAG 34.79 23 -50.8 0.67 AH014186-RA sulfate transporter 3;5 NA
39 ahy-mir-103b-5p CM025929.1 17309622 17309836 ACAGCTTCTTTAGCCTGATTGA 39.14 23 -57.2 0.658 AH021495-RA endonuclease/exonuclease/phosphatase family protein NA
40 ahy-mir5751 CM025929.1 4396496 4396282 ACTTACCATCTGATCAACATCA 34.79 23 -48.3 0.646 AH001925-RA disease resistance protein (TIR-NBS-LRR class) NA
41 ahy-mir-2565-5p CM025929.1 19349719 19349509 AAGGAGTATTTATAGGCCAGTT 34.79 23 -47.2 0.631 AH020817-RA fatty acyl-ACP thioesterases B NA
42 ahy-mir11083f-3p CM025929.1 14763790 14763637 ATCTTGGATTTAATCAACTTCG 30.44 23 -41.3 0.622 AH007122-RA cytochrome P450, family 88, subfamily A, polypeptide 3 NA
43 ahy-mir-4952-3p CM025930.1 9158268 9158488 ATTCCTTTTGCCGCCATTCAAG 43.48 23 -68.2 1.307 AH014850-RA SGNH hydrolase-type esterase superfamily protein NA
44 ahy-mir-12074-5p CM025930.1 7230863 7231011 AGTTTAAGATTTTGTTTGTGGG 30.44 23 -45.1 1.205 AH009000-RA holocarboxylase synthase 1 NA
45 ahy-mir-30f-5p CM025930.1 3047406 3047219 TGGTGTTTACATGTACTTTGAA 30.44 23 -48.8 1.083 AH012026-RA regulatory components of ABA receptor 3 NA
46 ahy-mir-6-3p CM025930.1 9595709 9595491 TGCTGTTCTTTTTTTCCTTTTC 30.44 23 -44.1 0.979 AH006656-RA poly(A) polymerase 1 NA
47 ahy-mir2936 CM025930.1 15647692 15647485 TTGAGAACACTCTCTCAAGATA 34.79 23 -67.2 0.971 AH003309-RA 0 NA
48 ahy-mir6270 CM025930.1 12544924 12545145 CAGGTATTGGAAACGAAAAAAA 30.44 23 -37.9 0.943 AH009864-RA Ankyrin repeat family protein NA
49 ahy-mir-2179-3p CM025930.1 6878900 6878987 CAAAGATCCAGATTTTTGCTGG 39.14 23 -59.3 0.886 AH000137-RA Tetratricopeptide repeat (TPR)-like superfamily protein NA
50 ahy-mir-590-3p CM025930.1 5888637 5888428 CAATGTATAAACCTGGATTGCT 34.79 23 -52.2 0.883 AH005270-RA Protein of unknown function, DUF647 NA

MFE: Minimum free energy; MFEI: Minimum free energy index;


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