Retrive data

miRNA INFORMATION

S.No miRNAid INGC Start Pos End Pos Sequence(5'-3') GC% miRNA Length *MFE *MFEI miRNA's target gene miRNA's Target Function type of SSR
1 ahy-mir-12339-3p CM025924.1 2294731 2294548 AGTACGGATTGTTCTGAATTGA 34.79 23 -51.5 0.689 AH010884-RA Family of unknown function (DUF716) NA
2 ahy-mir-2514 CM025924.1 11250557 11250343 ATGTTGGGTTTGAAGCTGTAAA 34.79 23 -51.5 0.689 AH014386-RA myb domain protein 36 NA
3 ahy-mir-2b-5p CM025924.1 23157183 23157320 CAAGGCACTGTGAACAATAATG 39.14 23 -36.9 0.683 AH004049-RA ATP phosphoribosyl transferase 2 NA
4 ahy-mir-10227a-3p CM025924.1 21504650 21504799 GTAAAGTCATACGATTGGGTCG 43.48 23 -56.1 0.679 AH014005-RA Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein NA
5 ahy-mir6225-3p CM025924.1 19336723 19336581 TGAAGATTCGTTTTTCAAGACC 34.79 23 -50.3 0.673 AH015119-RA ARF-GAP domain 5 NA
6 ahy-mir-30d-3p CM025924.1 19821337 19821120 TAAGCAAACATCTTTACTCATC 30.44 23 -43.9 0.671 AH001768-RA DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding NA
7 ahy-mir057 CM025924.1 20819428 20819237 TGGTGAACATATCGTACTATGT 34.79 23 -50.1 0.67 AH009689-RA RNA polymerase II transcription mediators NA
8 ahy-mir5029 CM025924.1 16345440 16345236 TAATGAGAGAGAAAAGCATAGA 30.44 23 -43.7 0.668 AH019751-RA serine protease inhibitor, Kazal-type family protein NA
9 ahy-mir-10294 CM025924.1 18578589 18578804 CACTTCGAATCATATAACTGTT 30.44 23 -37.9 0.666 AH014301-RA Phosphoinositide phosphatase family protein NA
10 ahy-mir7797b CM025924.1 17837153 17837367 TGCTTTCGAAATGTAAGAGGAT 34.79 23 -50.8 0.661 AH000075-RA tetratricopeptide repeat (TPR)-containing protein NA
11 ahy-mir-12340-3p CM025924.1 12549744 12549566 TTGATTCTGGAAACTGGATAAA 30.44 23 -43.8 0.66 AH004819-RA 0 NA
12 ahy-mir-1405-3p CM025924.1 16052593 16052497 TTTCAGCAGCAACAGCCAAAAC 43.48 23 -45 0.659 AH014600-RA Transducin/WD40 repeat-like superfamily protein NA
13 ahy-mir-5429 CM025924.1 13930455 13930314 TCACTGGAGGTACTCCAGCAGC 56.53 23 -50.4 0.656 AH022628-RA P-loop containing nucleoside triphosphate hydrolases superfamily protein NA
14 ahy-mir1061-3p CM025924.1 20170973 20171192 AAACCCCATTTCATTGACTACT 34.79 23 -49.6 0.654 AH022850-RA 0 NA
15 ahy-mir-449d-5p CM025924.1 20952996 20952835 ACTAAGAATTACAATCGTGATC 30.44 23 -42.8 0.654 AH011929-RA Ypt/Rab-GAP domain of gyp1p superfamily protein NA
16 ahy-mir-8-5p CM025924.1 10040937 10040825 ACAACAGTATTTGGAAATGGTC 34.79 23 -49.8 0.654 AH014315-RA Transducin/WD40 repeat-like superfamily protein NA
17 ahy-mir-10488-3p CM025924.1 16137476 16137611 ATTTATTCCGAAAGCACACGTG 39.14 23 -55.3 0.648 AH008086-RA Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein NA
18 ahy-mir-10254-3p CM025924.1 20243458 20243327 CAAACCCACTCATAAAGAAGGT 39.14 23 -54.4 0.638 AH001723-RA HXXXD-type acyl-transferase family protein NA
19 ahy-mir3639-3p CM025924.1 19642210 19642012 AAAAGCCAAAAGCTAAAGATCT 30.44 23 -41.7 0.637 AH009181-RA Nucleotidyltransferase family protein NA
20 ahy-mir5749 CM025924.1 17056196 17055987 TTGGTTCCGTTGATAATATTCC 34.79 23 -47.9 0.632 AH012557-RA ovate family protein 13 NA
21 ahy-mir-184-5p CM025924.1 20679180 20678965 AACACAAAGGAGTGATATCTCC 39.14 23 -52.7 0.624 AH011134-RA mitochondrial acyl carrier protein 2 NA
22 ahy-mir076 CM025924.1 21667728 21667945 CTGCTGCAGACGTTGATAAATA 39.14 23 -54.4 0.623 AH014809-RA proline-rich family protein NA
23 ahy-mir-2001-5p CM025924.1 10543669 10543465 TAATAGGCCAATTAGGTCTCTT 34.79 23 -37 0.622 AH010956-RA Transmembrane amino acid transporter family protein NA
24 ahy-mir-10472-5p CM025924.1 12493551 12493735 AACAGGGTGTGAAAGCTGTGAT 43.48 23 -57.9 0.617 AH004485-RA 0 NA
25 ahy-mir-23d CM025924.1 13701524 13701370 AAATTCTGGATCTGCCAGGAAA 39.14 23 -45.1 0.613 AH014423-RA Oxidoreductase family protein NA
26 ahy-mir086 CM025924.1 16865007 16864876 AAGACCAGTGTAGTAGCTGCCT 47.83 23 -55.7 0.613 AH014677-RA fatty acid hydroxylase 2 NA
27 ahy-mir-10499b-2-5p CM025924.1 15225636 15225850 TTGAATATGAGAAACTCCATCC 34.79 23 -45.8 0.612 AH021323-RA Ribosomal L29 family protein NA
28 ahy-mir159b-3p.3 CM025924.1 5491839 5492054 ATGCCTGACCGAGGACATAGCA 52.18 23 -49.7 0.611 AH014140-RA Transmembrane amino acid transporter family protein NA
29 ahy-mir9658-3p CM025924.1 24039149 24038930 TCTGGTATTCAACCAGAACATA 34.79 23 -46.2 0.609 AH001179-RA proliferating cell nuclear antigen 2 NA
30 ahy-mir-5305 CM025924.1 10300944 10301094 ATCTTCAAGCTCATGTTGAAGG 39.14 23 -46.4 0.608 AH012903-RA P-loop containing nucleoside triphosphate hydrolases superfamily protein NA
31 ahy-mir161-3p CM025924.1 16210088 16209982 AAACTGCTTTCAATGCTTCAAT 30.44 23 -39.74 0.607 AH014616-RA 0 NA
32 ahy-mir091 CM025924.1 20736594 20736509 TAGAGGTATTAATGCCATGCAC 39.14 23 -50.9 0.605 AH017691-RA Signal transduction histidine kinase NA
33 ahy-mir-10809 CM025924.1 22107760 22107599 AATCTTTCATCGATGGGAAGTC 39.14 23 -51 0.603 AH009694-RA alpha/beta-Hydrolases superfamily protein NA
34 ahy-mir10211b-5p CM025925.1 17924286 17924072 CTAGTTATAGTGATTTCAGTTC 30.44 23 -44.4 1.114 AH015810-RA Tetratricopeptide repeat (TPR)-like superfamily protein NA
35 ahy-mir8775 CM025925.1 9981501 9981295 CTCAACCATCAGCTTGAAGTTT 39.14 23 -83 0.987 AH011176-RA Pentatricopeptide repeat (PPR) superfamily protein NA
36 ahy-mir-3784-3p CM025925.1 17435467 17435682 AGTTGAAATTATTTTCTAGGGC 30.44 23 -48.8 0.932 AH000004-RA Transcription factor jumonji (jmjC) domain-containing protein NA
37 ahy-mir-54a-3p CM025925.1 18668982 18668765 ATGCCTTCTCATATCTCAAATT 30.44 23 -58.5 0.894 AH019119-RA protein kinase 2B NA
38 ahy-mir-12-3p CM025925.1 12406775 12406663 CCTGCAGGACTTATGTCTATTG 43.48 23 -77.7 0.816 AH017630-RA Major facilitator superfamily protein NA
39 ahy-mir-215-3p CM025925.1 7666621 7666749 TGTCACTTCTGCCGTTGCTACC 52.18 23 -52.1 0.805 AH003868-RA Phototropic-responsive NPH3 family protein NA
40 ahy-mir-10255-3p CM025925.1 10438638 10438748 ATGCTGAATGGGCATCTGTTGG 47.83 23 -64.8 0.792 AH014749-RA Peptidase S41 family protein NA
41 ahy-mir-71 CM025925.1 7309720 7309921 TTCAATTGAGAAAAGGGTAGTT 30.44 23 -43.8 0.753 AH012587-RA sorting nexin 1 NA
42 ahy-mir7984c-3p CM025925.1 19353085 19353185 CTTGAGTTTGGTATCATCGATC 39.14 23 -57.9 0.679 AH015634-RA AGAMOUS-like 26 penta nucleotide
43 ahy-mir-3825-5p CM025925.1 18017903 18018031 CTTCTGAAACAGAAGAAGAATG 34.79 23 -52.9 0.742 AH015430-RA 0 NA
44 ahy-mir7710-3p CM025925.1 11084877 11084729 CATTTTGTGACATTATAATGGC 30.44 23 -48.3 0.738 AH016040-RA peroxin 10 NA
45 ahy-mir158a CM025925.1 9570285 9570444 TATTACAAGAAGACAAAGAAGC 30.44 23 -47.3 0.723 AH018330-RA Phosphoribosyltransferase family protein NA
46 ahy-mir-7314-3p CM025925.1 11084877 11084726 AATGGCGCTTCAGAAATCAGAG 43.48 23 -47.6 0.711 AH016040-RA peroxin 10 NA
47 ahy-mir043 CM025925.1 11358517 11358632 AGGCGGTACAACAATTGCTTGA 43.48 23 -46.7 0.707 AH023078-RA Clathrin light chain protein NA
48 ahy-mir-1421h-5p CM025925.1 13062152 13062018 TTTTGTACGTACTGCAAGTCAT 34.79 23 -37.5 0.7 AH002988-RA purple acid phosphatase 27 NA
49 ahy-mir-8402-3p CM025925.1 8342115 8342008 CTTTGTTTTGATTGCTAGGCCT 39.14 23 -58.1 0.691 AH002954-RA ARF-GAP domain 1 NA
50 ahy-mir-7336-5p CM025925.1 12255638 12255480 CTGTGTTGCATCCACACTTCTA 43.48 23 -64.8 0.69 AH022267-RA Disease resistance protein (CC-NBS-LRR class) family NA

MFE: Minimum free energy; MFEI: Minimum free energy index;


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