Retrive data

miRNA INFORMATION

S.No miRNAid INGC Start Pos End Pos Sequence(5'-3') GC% miRNA Length *MFE *MFEI miRNA's target gene miRNA's Target Function type of SSR
1 ahy-mir-767-3p CM025922.1 16521699 16521901 GAAAGGAGTATGAGAAACTAAG 34.79 23 -67.3 0.9 AH014459-RA O-Glycosyl hydrolases family 17 protein NA
2 ahy-mir-2040b-3p CM025922.1 14596378 14596232 AAGTTCGTCTCGTATACTTTTT 30.44 23 -58.8 0.899 AH004753-RA Nodulin MtN21 /EamA-like transporter family protein NA
3 ahy-mir-154b-3p CM025922.1 14066814 14067033 TGTCTAACTTCATGGTTGACAT 34.79 23 -43.3 0.808 AH013349-RA Eukaryotic aspartyl protease family protein NA
4 ahy-mir-12413-3p CM025922.1 15334334 15334532 TGTCCAATTATCAGACAAGTCA 34.79 23 -32 0.767 AH011854-RA 20S proteasome beta subunit D1 NA
5 ahy-mir11308 CM025922.1 16700970 16700831 AGAAAGTTAGGATTTTCTTCAG 30.44 23 -48.6 0.743 AH011943-RA Rhodanese/Cell cycle control phosphatase superfamily protein NA
6 ahy-mir-9064 CM025922.1 14015226 14015079 AACAATGGACCTAACTGATACG 39.14 23 -60.9 0.724 AH009660-RA transmembrane protein-related NA
7 ahy-mir040 CM025922.1 18113213 18113427 ACTAGTTTTAGCTACTAGGACA 34.79 23 -53.4 0.714 AH012042-RA Leucine-rich repeat protein kinase family protein NA
8 ahy-mir6026-5p CM025922.1 9762815 9762980 AAGGTTAGATCAACTATTGCCT 34.79 23 -41.3 0.698 AH011547-RA ARM repeat superfamily protein NA
9 ahy-mir-10549 CM025922.1 11959632 11959850 ATCGAAATCAACAATCCTCAAA 30.44 23 -45.7 0.698 AH017599-RA transcription regulators;zinc ion binding NA
10 ahy-mir6139 CM025922.1 14430893 14430675 AATTTCGAAGGGAAGAACAAGG 39.14 23 -47.7 0.781 AH011771-RA chromatin remodeling factor18 tri nucleotide
11 ahy-mir1511 CM025922.1 10020720 10020884 TCCTTGACATGATATCAGAAGC 39.14 23 -58.2 0.682 AH018298-RA myb domain protein 23 NA
12 ahy-mir5253 CM025922.1 14480645 14480860 ATCCTAGAGCCTTAATCATTTT 30.44 23 -44.2 0.666 AH013808-RA pleiotropic drug resistance 3 NA
13 ahy-mir-430d CM025922.1 2127061 2126963 CAACAAAATCAAGCTATCTGTT 30.44 23 -43.1 0.659 AH011317-RA 0 NA
14 ahy-mir-10587 CM025922.1 19088624 19088527 CAACAAAGAAATTTCCTGTTGA 30.44 23 -33.5 0.655 AH012136-RA Protein kinase superfamily protein NA
15 ahy-mir-3895-5p CM025922.1 13460618 13460424 TCACCTCTTCTATTGAGTTGAG 39.14 23 -53.1 0.631 AH011727-RA uv-b-insensitive 4 NA
16 ahy-mir11474 CM025922.1 15348332 15348117 ATTGGATCTCCAGCGAGAACAA 43.48 23 -58.3 0.621 AH011855-RA P-loop containing nucleoside triphosphate hydrolases superfamily protein NA
17 ahy-mir-1559-3p CM025922.1 18224062 18224276 TTTGATGTATGCATCACATAGC 34.79 23 -46.8 0.617 AH012056-RA plastidic pyruvate kinase beta subunit 1 NA
18 ahy-mir-4617 CM025922.1 10985263 10985092 TTCGGATGTGACAGCCACATCG 52.18 23 -45.3 0.607 AH003956-RA 0 NA
19 ahy-mir-1333 CM025923.1 15938138 15938353 CTCTTTCCTGTTTGTTTGATAT 30.44 23 -41.9 0.64 AH006344-RA cation/hydrogen exchanger 15 di nucleotide
20 ahy-mir1886.3 CM025923.1 17752664 17752865 TATGTCCATCGAAAGATTTCAT 30.44 23 -41.5 1.041 AH007551-RA 0 NA
21 ahy-mir-9993a-3p CM025923.1 17353577 17353436 AGTCCCATCTCGGTGGGATCGG 60.87 23 -134.4 1.008 AH013636-RA actin depolymerizing factor 4 NA
22 ahy-mir-7132b-5p CM025923.1 13675375 13675590 TTCGACCAAGTCTGTACAATTG 39.14 23 -53.3 0.634 AH012287-RA cleavage and polyadenylation specificity factor 160 di nucleotide
23 ahy-mir-5393 CM025923.1 3172364 3172208 TAAATATTCGGTTGAGTTGGTT 30.44 23 -61.4 0.938 AH021801-RA alpha/beta-Hydrolases superfamily protein NA
24 ahy-mir-40b-5p CM025923.1 4962453 4962237 TACTTCAAGTTGTAGGATCATT 30.44 23 -52.9 0.915 AH012965-RA 0 NA
25 ahy-mir-513a-2-3p CM025923.1 13471485 13471676 ATTACACCTTTCTGAGATGCCT 39.14 23 -59.3 0.891 AH013659-RA beta glucosidase 17 NA
26 ahy-mir-9943 CM025923.1 7636760 7636977 TAACCTGTTCATCATCAAAAAG 30.44 23 -57.9 0.873 AH012149-RA TRAF-like superfamily protein NA
27 ahy-mir11108i-3p CM025923.1 5674962 5675179 GCTTCATTTAGACACACTAATT 30.44 23 -56.1 0.846 AH020906-RA 0 NA
28 ahy-mir-8914 CM025923.1 21145081 21144869 AAAAACTTGGTGTGTTGGTTGC 39.14 23 -69.1 0.81 AH021374-RA NAD(P)-binding Rossmann-fold superfamily protein NA
29 ahy-mir-9082 CM025923.1 10061090 10061308 ACTCACAACCCCCAACTCACTA 47.83 23 -81.7 0.791 AH019232-RA regulatory particle triple-A ATPase 6A NA
30 ahy-mir12175 CM025923.1 2368895 2368673 TCTTTTTTTCATCAGAAGCAGT 30.44 23 -52.4 0.786 AH012682-RA Protein kinase superfamily protein NA
31 ahy-mir5175-5p CM025923.1 15124763 15124601 TTTCCGCTCCAAATTACTGTGG 43.48 23 -54.4 0.777 AH023274-RA Microsomal signal peptidase 25 kDa subunit (SPC25) NA
32 ahy-mir-100e-5p CM025923.1 4949270 4949184 ATTTTTAACACATACGGTCCTC 34.79 23 -58.6 0.773 AH001227-RA C2H2 and C2HC zinc fingers superfamily protein NA
33 ahy-mir-8365-3p CM025923.1 5664215 5664009 AATAGGGAATTCTCCTTATTGA 30.44 23 -49.6 0.758 AH016249-RA 0 NA
34 ahy-mir-2707 CM025923.1 11917429 11917588 AGAAGCTGAATAGTGATGCTCT 39.14 23 -48.7 0.75 AH013529-RA embryo defective 2423 NA
35 ahy-mir-8261-5p CM025923.1 12885802 12886016 CACTTTTCCGGTGTGGAGAAAC 47.83 23 -45.5 0.743 AH013597-RA 0 NA
36 ahy-mir031 CM025923.1 425412 425628 TTTGGGGTTTACCTTGAGCTGT 43.48 23 -65.1 0.734 AH008157-RA COBRA-like protein 10 precursor NA
37 ahy-mir-7600 CM025923.1 11913879 11913665 ATGATACTTGACGTAATGACAG 34.79 23 -56.4 0.734 AH001786-RA Sec14p-like phosphatidylinositol transfer family protein NA
38 ahy-mir-2172-5p CM025923.1 21186525 21186739 GAATCCGAATGATGACTATGCT 39.14 23 -61.9 0.722 AH017152-RA Protein kinase superfamily protein NA
39 ahy-mir11136-3p CM025923.1 8446697 8446480 TTGGGATTTTGTGATAGTTGTG 34.79 23 -40.6 0.721 AH013222-RA ovate family protein 3 NA
40 ahy-mir-10071-3p CM025923.1 9581291 9581441 TGAAATCGTTGATGAATGCAAT 30.44 23 -40.1 0.716 AH013312-RA beta-galactosidase 17 NA
41 ahy-mir9477-3p CM025923.1 668011 668224 TGAATCAGTTGTTCCAGCATTT 34.79 23 -40.4 0.713 AH012497-RA Peroxidase superfamily protein NA
42 ahy-mir-432-3p CM025923.1 12258992 12259047 AAAATTCTATGGAGGAGCACTG 39.14 23 -60 0.703 AH010474-RA homolog of yeast sucrose nonfermenting 4 NA
43 ahy-mir-8160b-3p CM025923.1 12106894 12106708 TGAAGATAATGCTGGTGTTATC 34.79 23 -53 0.686 AH004983-RA Glycosyl hydrolase family protein NA
44 ahy-mir5374-5p CM025923.1 12771057 12770916 GAAATTTCCAGATGTGAAACTT 30.44 23 -32.7 0.68 AH001592-RA glutamate receptor 2 NA
45 ahy-mir1103-3p CM025923.1 10132776 10132558 GAATCGGAAGGACAAGAATGCA 43.48 23 -40 0.676 AH011180-RA DNA-binding storekeeper protein-related NA
46 ahy-mir-307-5p CM025923.1 5205009 5204795 ACAAGCCCGTGGGTTTTAGGAG 52.18 23 -48.8 0.673 #N/A NA NA
47 ahy-mir11160-5p CM025923.1 8201516 8201636 TCCCTTCAATGCCCTATCAAAT 39.14 23 -48.4 0.672 #N/A NA NA
48 ahy-mir7982b CM025923.1 9361598 9361384 GAGGAAACTCTTGGATGATAAC 39.14 23 -56.4 0.661 AH019074-RA myb domain protein 4r1 NA
49 ahy-mir-2d-3p CM025923.1 2154354 2154181 TGTTAGTGAATGGTTAGCAATG 34.79 23 -48.8 0.653 AH012658-RA laccase 17 NA
50 ahy-mir063 CM025923.1 16610524 16610615 TATCTTTAGCAACACTATCTGG 34.79 23 -49.3 0.647 AH021478-RA PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein NA

MFE: Minimum free energy; MFEI: Minimum free energy index;


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