Retrive data

miRNA INFORMATION

S.No miRNAid INGC Start Pos End Pos Sequence(5'-3') GC% miRNA Length *MFE *MFEI miRNA's target gene miRNA's Target Function type of SSR
1 ahy-mir-92b-3p CM025920.1 19030810 19030593 CGGCCGAGTCCAGGACGAGTTA 60.87 23 -60.9 0.641 AH004609-RA 0 NA
2 ahy-mir-514b-5p CM025920.1 6841634 6841518 TGTTGCATTCTCAAGAGAGGGG 47.83 23 -65.8 0.637 AH019819-RA TESMIN/TSO1-like CXC 2 NA
3 ahy-mir-8442-3p CM025920.1 19817341 19817165 ACTTATCATCAGATCACCCGTC 43.48 23 -50.8 0.635 #N/A NA NA
4 ahy-mir4234 CM025920.1 2680565 2680782 AACTGATTTTACAAGCCGTGAA 34.79 23 -48.6 0.65 AH018659-RA Stress responsive alpha-beta barrel domain protein tri nucleotide
5 ahy-mir3712 CM025920.1 4646349 4646132 TACTAGTTGGTGTGATCAAGAA 34.79 23 -45.4 0.625 AH006123-RA 0 NA
6 ahy-mir-92-5p CM025920.1 6151588 6151760 GATAAATATCTAGTCGTCGAGT 34.79 23 -46.7 0.624 AH022281-RA Disease resistance protein (CC-NBS-LRR class) family NA
7 ahy-mir7805-3p CM025920.1 21198698 21198919 TGCCAAATTTGGTGTCGTATAG 39.14 23 -53.2 0.624 AH017764-RA WRKY DNA-binding protein 21 NA
8 ahy-mir-2000 CM025920.1 14193718 14193823 AAAGCATAAGCAGTGAAGACGA 39.14 23 -51.2 0.609 AH013707-RA 0 NA
9 ahy-mir-7c-5p CM025920.1 17005252 17005454 CCCATCTTCAGCAAATCATAAC 39.14 23 -35.1 0.606 AH017959-RA Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein NA
10 ahy-mir-2114 CM025920.1 17366568 17366679 TTCCTCAAGCAAGGGAGTTCAA 43.48 23 -50.1 0.6 AH009405-RA 0 NA
11 ahy-mir-D14-3p CM025921.1 22643680 22643788 TGACGGATTATTATGTTTTCTG 30.44 23 -60.5 1.299 AH004936-RA Cysteine/Histidine-rich C1 domain family protein NA
12 ahy-mir-7304-3p CM025921.1 14673 14458 ATTTATACAATGGGGTCTCCTT 34.79 23 -55.9 1.004 AH009533-RA Transducin/WD40 repeat-like superfamily protein NA
13 ahy-mir-5877 CM025921.1 4497104 4496934 CTTACTTGAGACCGTCTTTTGT 39.14 23 -73.1 0.948 AH020836-RA sulfate transporter 3;5 NA
14 ahy-mir3631d CM025921.1 13762955 13763076 ATGTCAACATGGAAGGAGGCAC 47.83 23 -58.2 0.915 AH011792-RA protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases NA
15 ahy-mir-10043c-5p CM025921.1 16229062 16229203 TTATCATGCTTACTTCATGGAA 30.44 23 -57.3 0.876 AH013032-RA Plant protein of unknown function (DUF828) NA
16 ahy-mir-2513b CM025921.1 18141675 18141460 ATATGGTCTGAAGTTTGAATTG 30.44 23 -53.7 0.824 AH006772-RA Ubiquitin carboxyl-terminal hydrolase family protein NA
17 ahy-mir-11624a-5p CM025921.1 457599 457820 ACGTTTCCATGAAAATGTTCAA 30.44 23 -42 0.821 AH000971-RA Endomembrane protein 70 protein family NA
18 ahy-mir-10259-3p CM025921.1 13919662 13919483 AAAAGTACAGCAGCTGTTTGTC 39.14 23 -45 0.799 AH010415-RA purine permease 11 NA
19 ahy-mir-1336 CM025921.1 22421086 22420868 GAGGACATCTGAACCTCTTTTC 43.48 23 -60.9 0.778 AH010486-RA Tudor/PWWP/MBT superfamily protein NA
20 ahy-mir-8373-3p CM025921.1 22645732 22645825 ATAACATCTCCAGTACATATCA 30.44 23 -50.7 0.775 AH011297-RA vacuolar ATP synthase subunit E1 NA
21 ahy-mir-449b-3p CM025921.1 11043761 11043873 CTTACAACTACCCTACTTGTTA 34.79 23 -49.4 0.759 AH016384-RA zinc finger (CCCH-type) family protein NA
22 ahy-mir-10650 CM025921.1 15877857 15877642 TGGTAAGATTCATCATGAAGTT 30.44 23 -49.5 0.756 AH011899-RA NB-ARC domain-containing disease resistance protein NA
23 ahy-mir-11665-5p CM025921.1 4360768 4360680 TTCGTCTAGTTTCGATGTGAGT 39.14 23 -42.8 0.749 AH018060-RA COP1-interactive protein 1 NA
24 ahy-mir-10117-3p CM025921.1 21292694 21292783 TATGATGATCTTGATGACCTCA 34.79 23 -53.7 0.718 AH006252-RA CCCH-type zinc finger family protein NA
25 ahy-mir-6314 CM025921.1 18116117 18115917 TTCAGATCTGTAATCAGTAACA 30.44 23 -47.2 0.711 AH010777-RA Exonuclease family protein NA
26 ahy-mir5150-5p CM025921.1 20556568 20556482 AAATCTCTGTAGAGAAACTGCA 34.79 23 -53.9 0.711 AH010698-RA Class I glutamine amidotransferase-like superfamily protein NA
27 ahy-mir-11591-5p CM025921.1 18444733 18444540 TGTTTGCTGTAAGTGTCCATAG 39.14 23 -56.3 0.813 AH014339-RA Subtilase family protein tri nucleotide
28 ahy-mir-969-5p CM025921.1 15884468 15884682 AAACTTGATTAGATGGACGGAG 39.14 23 -55.9 0.704 AH010593-RA 0 NA
29 ahy-mir7729b-3p CM025921.1 14292700 14292919 CCAAATGGTGGTGGTAAAAAGA 39.14 23 -67.1 0.783 AH021401-RA ARM repeat superfamily protein tri nucleotide
30 ahy-mir-2h-3p CM025921.1 21874075 21874195 AATTAGAAAGAATCGATTCGAC 30.44 23 -45.3 0.683 AH012598-RA F-box family protein NA
31 ahy-mir-2235a-10-3p CM025921.1 5572019 5572107 GGCTACATTAGCATTGTATGCT 39.14 23 -57 0.678 AH018380-RA Clathrin adaptor complexes medium subunit family protein NA
32 ahy-mir-8364j-5p CM025921.1 17120465 17120248 AAAGAGAAATGAAGTGGAAGTA 30.44 23 -44.2 0.675 AH007108-RA binding NA
33 ahy-mir-4136-3p CM025921.1 513208 513428 AACATCGTATGGTAAGCCTTTT 34.79 23 -50.4 0.674 AH022504-RA ACT domain-containing protein NA
34 ahy-mir-8362-5p CM025921.1 15248157 15248082 TAGATGTGTCTTTGGACAAAAG 34.79 23 -50 0.669 AH012325-RA carboxyesterase 20 NA
35 ahy-mir-802-5p CM025921.1 3872981 3872767 AAAGGATGAAACCGAAAGGTGT 39.14 23 -56.1 0.667 AH005731-RA Integrase-type DNA-binding superfamily protein NA
36 ahy-mir058 CM025921.1 3249989 3250101 CCTCAGCATATATAGATCGTCC 43.48 23 -47.2 0.666 AH009925-RA Dihydrodipicolinate reductase, bacterial/plant NA
37 ahy-mir7695-3p CM025921.1 21019484 21019642 ATGTGCCACGTAGTAAGATTTT 34.79 23 -49.6 0.663 AH013494-RA Mitochondrial substrate carrier family protein NA
38 ahy-mir-4163-5p CM025921.1 689364 689531 TGAAGGGGTCCCCTCTGTGATA 52.18 23 -73.7 0.654 AH008293-RA TCP family transcription factor 4 NA
39 ahy-mir-7421-3p CM025921.1 8946560 8946403 ACGTTTATATAAGGACTCTTCC 34.79 23 -44.5 0.649 #N/A NA NA
40 ahy-mir-8214-3p CM025921.1 16843848 16843948 CCATAATTTCATGCTACAATCT 30.44 23 -42.4 0.648 AH010666-RA transducin family protein / WD-40 repeat family protein NA
41 ahy-mir-10236-3p CM025921.1 16229062 16229203 ATTGGCTCACGGCTTATTATAC 39.14 23 -54.5 0.645 AH008536-RA pyrophosphorylase 6 NA
42 ahy-mir-10787 CM025921.1 19555783 19555958 TTTTGTAGTTAAGTAAGTGTCG 30.44 23 -42.1 0.635 AH007398-RA Protein of unknown function (DUF1012) NA
43 ahy-mir081 CM025921.1 20360508 20360627 AAGAAGGGGCAAGACCTTATTG 43.48 23 -59.7 0.619 AH004618-RA ARF GTPase-activating protein NA
44 ahy-mir8688 CM025921.1 20158504 20158290 TACATGAGTTTTATCAGTAGCA 30.44 23 -40.8 0.615 AH011171-RA wall associated kinase-like 4 NA
45 ahy-mir11175-5p CM025921.1 18150814 18151028 CACGTAGAGTGTTCGATCATAT 39.14 23 -52.6 0.614 AH015838-RA RS2-interacting KH protein NA
46 ahy-mir-9397-3p CM025921.1 12877373 12877568 TGCAATTTTAGCTGAGATTGCG 39.14 23 -51.5 0.604 AH003307-RA Haem oxygenase-like, multi-helical NA
47 ahy-mir11288a CM025921.1 17752549 17752700 ATTTGGAGAATTGTTTGACTGC 34.79 23 -45.1 0.603 AH021947-RA 0 NA
48 ahy-mir-8915 CM025921.1 20134615 20134511 TCAACATCCAGGATTTGATACG 39.14 23 -50.8 0.601 AH016920-RA ABC transporter 1 NA
49 ahy-mir774b-5p CM025922.1 59534 59421 AAATCTTCATCTCTATGCCAAT 30.44 23 -38.7 1.078 AH006024-RA MAC/Perforin domain-containing protein NA
50 ahy-mir-750-5p CM025922.1 10671950 10672093 TACACAAGATCCAACCTTAATT 30.44 23 -41.3 1.044 AH011599-RA 0 NA

MFE: Minimum free energy; MFEI: Minimum free energy index;


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