Retrive data

miRNA INFORMATION

S.No miRNAid INGC Start Pos End Pos Sequence(5'-3') GC% miRNA Length *MFE *MFEI miRNA's target gene miRNA's Target Function type of SSR
1 ahy-mir-4766-5p CM025917.1 6454976 6455184 AATCTTGAAGAGCAGTTGGACA 39.14 23 -63.2 0.751 AH000293-RA nuclear assembly factor 1 NA
2 ahy-mir-411b-5p CM025917.1 11102862 11102996 GTACGTTATATGGTCGCCAATC 43.48 23 -70.4 0.75 AH022559-RA protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferases NA
3 ahy-mir030 CM025917.1 13742500 13742710 ATTTGAGTGATACGCTTATGGA 34.79 23 -56.4 0.74 AH017133-RA CDK inhibitor P21 binding protein NA
4 ahy-mir3949 CM025917.1 9130898 9130689 GACATTTTTGCCCGATTTAACA 34.79 23 -46.3 0.735 AH002838-RA AGAMOUS-like 65 NA
5 ahy-mir7717a-5p CM025917.1 7652569 7652784 ATGAGTTCGAATCTCAATCACC 39.14 23 -51.4 0.734 AH005880-RA C-8,7 sterol isomerase NA
6 ahy-mir11068f-3p CM025917.1 15443312 15443489 ATGTTCATACTTTACCATTGGG 34.79 23 -54.7 0.731 AH004679-RA Tetratricopeptide repeat (TPR)-like superfamily protein NA
7 ahy-mir-1250 CM025917.1 29922496 29922710 ATAAAGTCATTGAATGTGGCCT 34.79 23 -56.1 0.73 AH003876-RA germin 3 NA
8 ahy-mir-927b-5p CM025917.1 14293842 14293775 TGAAGCATACAGATTCAGTGTT 34.79 23 -54.4 0.727 AH006841-RA Pathogenesis-related thaumatin superfamily protein NA
9 ahy-mir-11272-3p CM025917.1 13056921 13057052 TCTCTCAAGTGTTCTTGTGTTT 34.79 23 -46.4 0.725 AH003178-RA P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain NA
10 ahy-mir-133b-3p CM025917.1 37088628 37088849 AATTGCTTCAACCAGCTATTGT 34.79 23 -53.8 0.719 AH003480-RA multidrug resistance-associated protein 3 NA
11 ahy-mir039 CM025917.1 32595998 32596215 TCAACCTTGGTTAGCTTTTGTG 39.14 23 -60.4 0.715 AH018417-RA P-glycoprotein 2 NA
12 ahy-mir7781-3p CM025917.1 6565886 6565845 GATAGTCAGAAAGATTAGTTGA 30.44 23 -46.4 0.709 AH005127-RA serine carboxypeptidase-like 45 NA
13 ahy-mir10223-5p CM025917.1 7745277 7745494 TGATGAAGCAGATCGCATGTTT 39.14 23 -57.3 0.707 AH008880-RA P-loop containing nucleoside triphosphate hydrolases superfamily protein NA
14 ahy-mir-9623-5p CM025917.1 10775753 10775659 ATTGTGGGATTTAGGGCTGAAA 39.14 23 -54.1 0.705 AH000229-RA origin recognition complex 1 NA
15 ahy-mir-2f CM025917.1 19734051 19734262 AGATTTGGTTTCAGTATGTCTG 34.79 23 -52.6 0.703 AH003369-RA Subtilase family protein NA
16 ahy-mir046 CM025917.1 28918731 28918945 GGTTGAATTTGATCCTCTGAGT 39.14 23 -58.3 0.693 AH013049-RA alcohol dehydrogenase 1 NA
17 ahy-mir6234b-3p CM025917.1 20624289 20624197 TGGAAATGTGTTCGTCGAATGT 39.14 23 -54.4 0.692 AH007941-RA Protein kinase superfamily protein NA
18 ahy-mir828b-3p CM025917.1 34706032 34706156 AGGCTTCGACCAAGAAATCATG 43.48 23 -44.4 0.69 AH021134-RA Survival protein SurE-like phosphatase/nucleotidase NA
19 ahy-mir-8831 CM025917.1 37088848 37088627 TGACTTCTCATCTCTACTTAAA 30.44 23 -45.7 0.689 AH004425-RA Domain of unknown function (DUF220) NA
20 ahy-mir8687 CM025917.1 11542254 11542471 CATCCTCAACAAAAGAAACACA 34.79 23 -50.8 0.679 AH018832-RA ubiquitin activating enzyme 2 NA
21 ahy-mir-205-3p CM025917.1 32795619 32795836 TATTTTGTGGAGTGAAGTCAAC 34.79 23 -50.7 0.678 AH007691-RA ATP-dependent Clp protease NA
22 ahy-mir-511 CM025917.1 31223715 31223598 ATGAAGTAGTGGCTTTTGCTCG 43.48 23 -43.3 0.668 AH005704-RA voltage dependent anion channel 2 NA
23 ahy-mir10541 CM025917.1 28654433 28654221 TTGATGATCTTCAAACAATGCG 34.79 23 -52.8 0.706 AH005852-RA GRAM domain family protein tri nucleotide
24 ahy-mir-10621a CM025917.1 6828975 6829195 TGCAGTGGCTGCAGCAGTGGCA 60.87 23 -88.2 0.662 AH014250-RA 1-amino-cyclopropane-1-carboxylate synthase 7 NA
25 ahy-mir-147-5p CM025917.1 10355487 10355354 GAATTGGTGCAGAAATATGTGC 39.14 23 -56.3 0.66 AH015571-RA Heavy metal transport/detoxification superfamily protein NA
26 ahy-mir-12069-3p CM025917.1 14933430 14933310 TACATTTTTGTACGACAACAGC 34.79 23 -49.9 0.658 AH003267-RA CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein NA
27 ahy-mir9741 CM025917.1 11210190 11210404 TTTCAACACATTCCTACAAGAA 30.44 23 -43.6 0.654 AH020608-RA SufE/NifU family protein NA
28 ahy-mir-9680-3p CM025917.1 21665750 21665857 CTTGGAAATCTCTTCTAAGGCG 43.48 23 -53.4 0.653 AH012555-RA alpha/beta-Hydrolases superfamily protein NA
29 ahy-mir-9427 CM025917.1 33458093 33457879 CAATAGTGCAATCTCACTTGTC 39.14 23 -54.6 0.649 AH004051-RA Protein of unknown function (DUF803) NA
30 ahy-mir-31-5p CM025917.1 32405569 32405394 ATCAGCTTAGGCAACTAGGCGT 47.83 23 -42.7 0.647 AH019642-RA sigma factor E NA
31 ahy-mir-133b-3p CM025917.1 37088628 37088849 AAGGAGACCTTTCAACCAGTTC 43.48 23 -60.2 0.644 AH003480-RA TLD-domain containing nucleolar protein NA
32 ahy-mir-462 CM025917.1 19822942 19823147 ATGGACTCATTATGGGTCCCAC 47.83 23 -55.1 0.644 AH003371-RA Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein NA
33 ahy-mir12105-3p CM025917.1 28773916 28774122 CACCCAAAACAGCTCTTCTGTA 43.48 23 -49.4 0.642 AH008399-RA cyclin-dependent protein kinase 3;2 NA
34 ahy-mir065 CM025917.1 8770934 8770734 CCATGTGTTACCCACATATGAG 43.48 23 -61.4 0.642 AH001765-RA SH3 domain-containing protein NA
35 ahy-mir066 CM025917.1 36833139 36833343 TTGTTGAGAAAACCTCAAATCT 30.44 23 -42 0.642 AH002018-RA HCO3- transporter family NA
36 ahy-mir-10021-5p CM025917.1 11007722 11007548 AAACATGGTGATGATTCTGACA 34.79 23 -47.99 0.642 AH022699-RA maternal effect embryo arrest 60 NA
37 ahy-mir068 CM025917.1 24839207 24839333 ACACTCAAGAACTCTTGGTAGT 39.14 23 -53.9 0.641 AH008622-RA C2H2-type zinc finger family protein NA
38 ahy-mir3954b-3p CM025917.1 33334500 33334683 CTTCTGCTATATTGGGCAGAGA 43.48 23 -47.8 0.639 AH023020-RA UDP-Glycosyltransferase superfamily protein NA
39 ahy-mir-181a-3p CM025917.1 38177484 38177309 AGTCAACGATACATGATTTGTA 30.44 23 -41.6 0.636 AH004543-RA squamosa promoter binding protein-like 2 NA
40 ahy-mir-10262-3p CM025917.1 28663952 28663737 TTCAGGGATTAATCCTACAAGA 34.79 23 -49.3 0.65 AH001983-RA RHOMBOID-like protein 5 tri nucleotide
41 ahy-mir-9398-5p CM025917.1 37705538 37705752 AGGGAGATTAAAGATAAGGGTA 34.79 23 -47.7 0.629 AH021172-RA Eukaryotic aspartyl protease family protein NA
42 ahy-mir-5365b CM025917.1 8710543 8710760 GAGAATACAATCGAAGAGTCTG 39.14 23 -52.6 0.625 AH004063-RA general regulatory factor 7 NA
43 ahy-mir3693j CM025917.1 10238973 10238846 AAACTATAGGATTTTGCCAAGT 30.44 23 -40.9 0.625 AH017391-RA signal recognition particle-related / SRP-related NA
44 ahy-mir-10625 CM025917.1 285997 285780 CAGAAAATGTTCAGTTTCCTGT 34.79 23 -47.3 0.624 AH018946-RA Peptidase M50 family protein NA
45 ahy-mir-7940b-5p CM025917.1 36268037 36267912 ACCAAGGTAAGAAGAATCTACG 39.14 23 -46.7 0.622 AH004338-RA Transducin/WD40 repeat-like superfamily protein NA
46 ahy-mir-36a CM025917.1 12063397 12063251 TCTGGAAGACATTCATTTAGTG 34.79 23 -47.6 0.616 AH003098-RA exocyst complex component sec3A NA
47 ahy-mir8717 CM025917.1 34693807 34693595 CGTAACCTCGAATCAATCTGGA 43.48 23 -50.3 0.619 AH004165-RA serine hydroxymethyltransferase 6 tri nucleotide
48 ahy-mir085 CM025917.1 36213939 36214086 ACGATTTTTGTCCGATACATTC 34.79 23 -45.9 0.614 AH004332-RA nuclear encoded CLP protease 5 NA
49 ahy-mir-500a-3p CM025917.1 11583153 11583367 TTTTGAAAATCTTCTCTTGCCG 34.79 23 -47 0.611 AH009452-RA cytochrome P450, family 716, subfamily A, polypeptide 1 NA
50 ahy-mir-1304 CM025917.1 35407688 35407567 TAGGCTACAATTATGTTGCTGC 39.14 23 -51.4 0.611 AH018173-RA YELLOW STRIPE like 2 NA

MFE: Minimum free energy; MFEI: Minimum free energy index;


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