Retrive data

miRNA INFORMATION

S.No miRNAid INGC Start Pos End Pos Sequence(5'-3') GC% miRNA Length *MFE *MFEI miRNA's target gene miRNA's Target Function type of SSR
1 ahy-mir-92b-5p CM025926.1 1736250 1736429 TCAGGCATTTTTGCAAGATTTT 30.44 23 -42.7 0.653 AH020217-RA Class II aaRS and biotin synthetases superfamily protein NA
2 ahy-mir-1262-3p CM025926.1 16634750 16634535 GAAGTTGATGGGAGAATTTGTT 34.79 23 -49.7 0.665 AH017553-RA actin binding tri nucleotide
3 ahy-mir-2505 CM025926.1 20460813 20460599 CTGTATGTTTGAATAGCATTGC 34.79 23 -48 0.642 AH007947-RA CTC-interacting domain 9 NA
4 ahy-mir11466d CM025926.1 13486780 13486987 CAAGTGTCTTGAACGATTAGAA 34.79 23 -47.5 0.635 AH017269-RA GLNB1 homolog NA
5 ahy-mir-16a-3p CM025926.1 12505925 12506139 GGAAATTATCTCCTGTTGTATG 34.79 23 -48 0.633 AH022947-RA ADP-glucose pyrophosphorylase family protein NA
6 ahy-mir5185l-3p CM025926.1 15924212 15924401 GAGAGAAGAAGTCGATCTCCAA 43.48 23 -53.1 0.63 AH000178-RA SIT4 phosphatase-associated family protein NA
7 ahy-mir-10136-5p CM025926.1 14532473 14532589 TTCTGTTTTTCTGTTGCTTTCT 30.44 23 -40.8 0.624 AH017358-RA homolog of Medicago truncatula MTN3 NA
8 ahy-mir-199b-3p CM025926.1 16482902 16482748 ACTAGTTTGCACATATATATGC 30.44 23 -40.5 0.619 AH017540-RA Remorin family protein NA
9 ahy-mir7746-5p CM025926.1 353777 353994 TGTGGACTAAGAGTTTCATGCA 39.14 23 -51.8 0.607 AH016691-RA Plant protein of unknown function (DUF869) NA
10 ahy-mir4381 CM025926.1 11650330 11650116 TGTAAACGTTGACAAGGAGGAT 39.14 23 -51.6 0.605 AH008663-RA Protein phosphatase 2C family protein NA
11 ahy-mir5377b CM025926.1 16368651 16368818 CGTGTGCGATTGAACATGCTAC 47.83 23 -62.4 0.604 AH017876-RA BAK1-interacting receptor-like kinase 1 NA
12 ahy-mir477c CM025926.1 19535145 19535284 AGAAGAACTTGAACTGTTTTTC 30.44 23 -39.3 0.601 AH007512-RA F-box family protein NA
13 ahy-mir-10b-3p CM025927.1 9857939 9857725 TTTCGAAGGTGGGATTTCAATT 34.79 23 -56.5 1.212 AH009618-RA BCL-2-associated athanogene 6 NA
14 ahy-mir003 CM025927.1 9580386 9580169 TCGATATACTCTTTGTACATCT 30.44 23 -61.2 1.123 AH018704-RA nucleotide-rhamnose synthase/epimerase-reductase NA
15 ahy-mir-9237b CM025927.1 11151532 11151685 ATCAGGTGTTGGTGTCTCACGT 47.83 23 -62.8 1.01 AH018815-RA AMP deaminase, putative / myoadenylate deaminase, putative NA
16 ahy-mir-7589 CM025927.1 15429581 15429799 CTTTAATGGAAATGGAAATGGA 30.44 23 -47.4 1.354 AH013757-RA subtilase 4.13 hexa nucleotide
17 ahy-mir5208c CM025927.1 4620740 4620520 ATTAGCAGTAACAACATCCATA 30.44 23 -57.4 0.865 AH018385-RA Peptidase M20/M25/M40 family protein NA
18 ahy-mir-11214-5p CM025927.1 144156 144333 TAAGGATAACTCCTAATTTGTC 30.44 23 -31.9 0.859 AH016039-RA Chaperone DnaJ-domain superfamily protein NA
19 ahy-mir-7612 CM025927.1 20117845 20118059 GAGGTATCAAAGATACCTCATA 34.79 23 -63.9 0.854 AH006122-RA S-adenosyl-L-methionine-dependent methyltransferases superfamily protein NA
20 ahy-mir-2165-3p CM025927.1 7964440 7964223 CTTGCTTACTCTAAAGATGTTC 34.79 23 -61.8 0.815 AH014776-RA Integrin-linked protein kinase family NA
21 ahy-mir10984b-5p CM025927.1 5275010 5274796 AATCACAGTTACACAGTCAATT 30.44 23 -53.2 0.813 AH018441-RA Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein NA
22 ahy-mir-2584-3p CM025927.1 19342413 19342528 CATTTTTGCAAACAGACAATGC 34.79 23 -60.2 0.805 AH009107-RA Leucine-rich repeat protein kinase family protein NA
23 ahy-mir3476-5p CM025927.1 1742852 1743070 AAAGAAACTGGGTTTGTTTGGA 34.79 23 -39.9 0.797 AH021625-RA 0 NA
24 ahy-mir022 CM025927.1 7383609 7383726 TTTCTAATACTATTGGCAACTC 30.44 23 -50.2 0.789 AH005128-RA 0 NA
25 ahy-mir-4014-3p CM025927.1 4194215 4194081 CAATTGATGCCCTTTCTGTAAA 34.79 23 -38.3 0.787 AH018553-RA Terpenoid synthases superfamily protein NA
26 ahy-mir-11249-3p CM025927.1 2917039 2917257 AAGCCCACCTCCAATAAGTGGG 52.18 23 -69.8 0.643 AH011394-RA gamma tonoplast intrinsic protein mono nucleotide
27 ahy-mir-234-3p CM025927.1 574262 574434 ATCTCAGGAGAATGCACATTGG 43.48 23 -54.9 0.765 AH018047-RA vacuolar H+-ATPase subunit E isoform 3 NA
28 ahy-mir024 CM025927.1 15157792 15157943 AGCATTGGCGATTAGAGCACAA 43.48 23 -53.7 0.762 AH014759-RA P-glycoprotein 9 NA
29 ahy-mir-7637 CM025927.1 5904778 5904992 TCGAGCTATCCCATTAGCTCCT 47.83 23 -56.2 0.758 AH013235-RA root hair specific 18 NA
30 ahy-mir-430d-5p CM025927.1 7875594 7875664 TGCAGTAACTGGAGCATATGCA 43.48 23 -61.9 0.757 AH019916-RA Transducin/WD40 repeat-like superfamily protein NA
31 ahy-mir-10031d-3p CM025927.1 9820971 9820841 CTTAAATAAATGGGTCAGGTTC 34.79 23 -56.6 0.757 AH013311-RA heat shock protein 60-3A NA
32 ahy-mir4382 CM025927.1 5385056 5384873 ATGTTTTCTATGTTAACTGGGA 30.44 23 -49.4 0.755 AH016315-RA cation/hydrogen exchanger 15 NA
33 ahy-mir-8796 CM025927.1 3410058 3410275 ACCAATACAGGAATCCAGAAAT 34.79 23 -57.2 0.754 AH011982-RA Protein with RING/U-box and TRAF-like domains NA
34 ahy-mir-2696 CM025927.1 19499017 19498799 CTTCTCAATGACCACATTGATT 34.79 23 -55.7 0.745 AH016104-RA KH domain-containing protein NA
35 ahy-mir-5735-3p CM025927.1 21466342 21466557 AACAGGATAATCAAAGTCTTCA 30.44 23 -45.1 0.745 AH019337-RA P-loop containing nucleoside triphosphate hydrolases superfamily protein NA
36 ahy-mir-2043-5p CM025927.1 20161795 20161697 AGAAAGGCGATATCACTCAGTG 43.48 23 -69.9 0.734 AH001932-RA TOPLESS-related 1 NA
37 ahy-mir11135c-3p CM025927.1 11872312 11872105 CGATCTTTTATAAGCTTAGCTT 30.44 23 -47.7 0.729 AH018872-RA syntaxin of plants 124 NA
38 ahy-mir-2028-5p CM025927.1 3766422 3766633 TGAACAAGCAGTCCGATTGCGC 52.18 23 -48.9 0.727 AH010768-RA RNA-binding KH domain-containing protein NA
39 ahy-mir035 CM025927.1 7162645 7162425 AATTGCAAGAGCAGGCGATAAA 39.14 23 -60.9 0.724 AH001283-RA TraB family protein NA
40 ahy-mir-12385-3p CM025927.1 19425303 19425183 CAAATTGTGTATCAAGGCCCTC 43.48 23 -55 0.723 AH020074-RA Ypt/Rab-GAP domain of gyp1p superfamily protein NA
41 ahy-mir-9640-3p CM025927.1 7734933 7735108 TTTTGCCATCTGACTTTTATCT 30.44 23 -37.8 0.714 AH020500-RA global transcription factor group B1 NA
42 ahy-mir171b-5p CM025927.1 10044428 10044642 GCATAAATTTGTTGGCATGGAA 34.79 23 -45.6 0.713 AH020803-RA golgi nucleotide sugar transporter 4 NA
43 ahy-mir-214 CM025927.1 8777353 8777219 AATAGCACTGACTGTCTGTGTG 43.48 23 -61.8 0.707 AH019527-RA MBOAT (membrane bound O-acyl transferase) family protein NA
44 ahy-mir-4022-3p CM025927.1 9185979 9185762 AGTGCAAACTCATATTGCACGG 43.48 23 -63.1 0.705 AH017280-RA tolB protein-related NA
45 ahy-mir869.1 CM025927.1 14638145 14638102 TACTGTTCAATTCTGCTTTCTT 30.44 23 -45 0.804 AH022297-RA DHBP synthase RibB-like alpha/beta domain tri nucleotide
46 ahy-mir-1175-3p CM025927.1 1645445 1645559 GAGATTCTCTTGTTTCTGGCAT 39.14 23 -58.5 0.686 AH019238-RA NB-ARC domain-containing disease resistance protein NA
47 ahy-mir-2225-5p CM025927.1 19912736 19912849 GGAGGAAGAGCACCGCTTCCTT 56.53 23 -65 0.68 AH004498-RA Homeodomain-like superfamily protein NA
48 ahy-mir-8239-3p CM025927.1 21635868 21636085 AATATCCAAATCGGAAACCCGA 39.14 23 -56.8 0.675 AH018760-RA HXXXD-type acyl-transferase family protein NA
49 ahy-mir-4124-5p CM025927.1 17812497 17812281 CAAGTTCACATACAGATTTAAG 30.44 23 -44 0.672 AH019146-RA chlororespiratory reduction 7 NA
50 ahy-mir055 CM025927.1 21739692 21739477 TGACTCTGACTGGAGTTATCTC 43.48 23 -57.5 0.671 AH010144-RA Leucine-rich repeat protein kinase family protein NA

MFE: Minimum free energy; MFEI: Minimum free energy index;


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