Retrive data

miRNA INFORMATION

S.No miRNAid INGC Start Pos End Pos Sequence(5'-3') GC% miRNA Length *MFE *MFEI miRNA's target gene miRNA's Target Function type of SSR
1 ahy-mir-105b-5p CM025930.1 4763325 4763108 AAGGAGTCTGAGAATTTCAACC 39.14 23 -54.5 0.882 AH011995-RA F-box and associated interaction domains-containing protein NA
2 ahy-mir-10085-3p CM025930.1 14659462 14659272 AACTACTAAGGAGGAATTATAC 30.44 23 -38.1 0.84 AH002756-RA Calmodulin binding protein-like NA
3 ahy-mir-7422b-3p CM025930.1 12742450 12742233 CGCAAAGCAACTTTCGGATCTA 43.48 23 -77.5 0.829 AH022603-RA Protein of unknown function (DUF1677) NA
4 ahy-mir-103-5p CM025930.1 2145296 2145186 TTAGCCTCTTTATCCATGTCTA 34.79 23 -59.2 0.792 AH021918-RA 0 NA
5 ahy-mir023 CM025930.1 5848665 5848449 TTTTGAGTCTATCAACTGAACT 30.44 23 -46.9 0.786 AH022291-RA exocyst complex component 84B NA
6 ahy-mir027 CM025930.1 5942326 5942522 AGATAGATTCATCTGTCCTAGC 39.14 23 -45.6 0.757 AH008533-RA 0 NA
7 ahy-mir-1546b-3p CM025930.1 2750853 2750713 AGGGATTCTCATGTTCCTGTAT 39.14 23 -62.1 0.738 AH004360-RA 0 NA
8 ahy-mir-2946 CM025930.1 46105 45888 GTGATGCCATATCTTTTAGTAG 34.79 23 -54.9 0.724 AH021559-RA Aldolase-type TIM barrel family protein NA
9 ahy-mir-10360-5p CM025930.1 74773 74990 AGCTTCTCAACTAGTCAATAAT 30.44 23 -50.7 0.931 AH023238-RA 0 tri nucleotide
10 ahy-mir-34c-5p CM025930.1 4507510 4507323 AAACTTCAACTAACTGATTTGG 30.44 23 -47.1 0.72 AH022182-RA CW-type Zinc Finger NA
11 ahy-mir044 CM025930.1 12776489 12776703 AGGTAAATGTGAAGGGATTAGG 39.14 23 -40 0.705 AH022606-RA Pentatricopeptide repeat (PPR) superfamily protein NA
12 ahy-mir-802 CM025930.1 4037504 4037284 CATGGGATGAATCTTTTGCAGA 39.14 23 -51 0.697 AH002378-RA galacturonosyltransferase 3 NA
13 ahy-mir-31 CM025930.1 16153975 16154189 AATCTTGCCACATGGACCTAAC 43.48 23 -63.3 0.677 AH005304-RA zinc ion binding;DNA binding NA
14 ahy-mir-449b CM025930.1 4994899 4994731 GATGCGATTTCCGCAGCCAGCT 56.53 23 -56.1 0.675 AH022228-RA Protein kinase superfamily protein NA
15 ahy-mir5068 CM025930.1 4656006 4656220 ATGGGTATGGGTACCCTCCACA 52.18 23 -73.4 0.657 AH021441-RA SCARECROW-like 13 NA
16 ahy-mir-8288-5p CM025930.1 609755 609541 AAATCGAATCGATACGATGATC 34.79 23 -52.7 0.695 AH021746-RA Homeodomain-like superfamily protein tri nucleotide
17 ahy-mir-1822 CM025930.1 2208224 2208315 AAGTCTTTCAATGACTCTAAGG 34.79 23 -48.7 0.651 AH010551-RA ATP binding microtubule motor family protein NA
18 ahy-mir6427-3p CM025930.1 15831240 15831027 TTGGGAATGAACATCCAATTAA 30.44 23 -43.1 0.65 AH003577-RA timeless family protein NA
19 ahy-mir-11590-5p CM025930.1 6667487 6667272 ATTTCAGGGTCTCCAGTCCATG 47.83 23 -67.1 0.65 AH022350-RA lipoxygenase 3 NA
20 ahy-mir-3287 CM025930.1 11911198 11911376 TGGTTTTGAAGGGTTTAACGTA 34.79 23 -48.2 0.636 AH022575-RA laccase 2 NA
21 ahy-mir-676-5p CM025930.1 7231035 7230821 TCTTCAACTTCTTTCTTCTCAT 30.44 23 -41.5 0.634 AH009370-RA Proteasome component (PCI) domain protein NA
22 ahy-mir071 CM025930.1 4348744 4348557 ACTCCCCCGGGAGGATACAATC 56.53 23 -52.6 0.633 #N/A NA NA
23 ahy-mir-301b-5p CM025930.1 5419070 5418851 ACTGGTGCAACCTATGCTCAAC 47.83 23 -57.2 0.633 #N/A NA NA
24 ahy-mir072 CM025930.1 5942326 5942522 AAGATAGATTCATCTGTCCTAG 34.79 23 -47.1 0.63 AH021125-RA SNF7 family protein NA
25 ahy-mir8706b CM025930.1 7664126 7664305 TGTGAGGATTGATTACTTTGAC 34.79 23 -47.3 0.624 AH016668-RA NAC (No Apical Meristem) domain transcriptional regulator superfamily protein NA
26 ahy-mir-2721 CM025930.1 8910212 8910428 TAACATGGCATCAAAAGCCAAC 39.14 23 -53.1 0.631 AH009377-RA Domain of unknown function (DUF3598) tri nucleotide
27 ahy-mir-5853 CM025930.1 7577367 7577581 ATTGGTGATGGGGTGTATACCG 47.83 23 -50.4 0.613 AH022413-RA Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein NA
28 ahy-mir-2713 CM025930.1 6304607 6304492 TATTTCATTGAAGGCATGCACC 39.14 23 -51.9 0.608 AH022322-RA GDSL-motif lipase 5 NA
29 ahy-mir-2041b-3p CM025930.1 2961576 2961397 TTATTTTCCTCTTAGCCCCAGA 39.14 23 -41.4 0.601 AH014661-RA homolog of carrot EP3-3 chitinase NA
30 ahy-mir-259 CM025931.1 406640 406812 TGATGAGATTTCCCTCGTCATT 39.14 23 -59.1 1.208 AH022768-RA auxin transport proteind (BIG) NA
31 ahy-mir11174-3p CM025931.1 20878 20958 TTTCGACATTAGAGTACAGACA 34.79 23 -47.2 1.069 AH022122-RA translocon at the outer envelope membrane of chloroplasts 159 NA
32 ahy-mir-10734 CM025931.1 9092945 9092771 CTTAACATCTTTAGAATTGAGG 30.44 23 -44.7 1.02 AH021488-RA aspartic proteinase A1 NA
33 ahy-mir-184c-3p CM025931.1 1158497 1158284 AACATGGAAACCAATTTTCGTG 34.79 23 -66.2 0.885 AH012741-RA RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain hexa nucleotide
34 ahy-mir-8434-5p CM025931.1 9981062 9980851 ATTTTGGCCTATGGTATACTCA 34.79 23 -44.3 0.872 AH020102-RA ARM repeat protein interacting with ABF2 NA
35 ahy-mir-9946 CM025931.1 4748613 4748398 ACTTTTTGAGAGAATATATGGG 30.44 23 -55.8 0.853 AH001274-RA Helicase protein with RING/U-box domain NA
36 ahy-mir-2041a-3p CM025931.1 1536239 1536117 CTTGTTTTTGCTAGAGCAAAAT 30.44 23 -49.9 0.841 AH004967-RA phospholipase D delta NA
37 ahy-mir-10711 CM025931.1 12863984 12864099 CTAGCCCTGCAGGACTCGTGTC 60.87 23 -74.2 0.841 AH012471-RA MAC/Perforin domain-containing protein NA
38 ahy-mir010 CM025931.1 328774 328903 TCCATTTAACCATGATTTGCAA 30.44 23 -49.9 0.837 AH009265-RA Glycosyl hydrolase superfamily protein NA
39 ahy-mir-7398v-5p CM025931.1 9815504 9815718 TAGAGGTGGGAATATAGGGGTG 47.83 23 -69.4 0.834 AH016323-RA laccase 12 NA
40 ahy-mir1095b CM025931.1 3789423 3789221 TGATGTTGTTTCCAAATGTGAT 30.44 23 -50.8 0.826 AH001451-RA Serine carboxypeptidase S28 family protein NA
41 ahy-mir7993d CM025931.1 1670485 1670703 CGAGTAGCCTTTATGTGGGTAA 43.48 23 -60.4 0.803 AH006537-RA NAD(P)-linked oxidoreductase superfamily protein NA
42 ahy-mir447b CM025931.1 9652131 9652345 AAAGCTGACAAAACATCTAGAA 30.44 23 -52.4 0.79 AH009547-RA cytochrome P450, family 703, subfamily A, polypeptide 2 NA
43 ahy-mir167b-3p CM025931.1 14771777 14771591 GTTCATGTTGCAGATAAGAAGA 34.79 23 -49.2 0.649 AH013787-RA phosphate transporter 4;1 mono nucleotide
44 ahy-mir2665 CM025931.1 7311455 7311598 AAAATTTTGACCTGAACCTAAC 30.44 23 -46.6 0.785 AH001629-RA UDP-glucosyl transferase 73B3 NA
45 ahy-mir11296 CM025931.1 2258688 2258906 AGGTTCTCTTCCAGCCATCATT 43.48 23 -73.1 0.778 AH002134-RA AAA-type ATPase family protein NA
46 ahy-mir-35a CM025931.1 7255694 7255908 AGTAGCATTGTGAAAATTGGTT 30.44 23 -40.8 0.624 AH020970-RA Replication protein A, subunit RPA32 mono nucleotide
47 ahy-mir029 CM025931.1 645689 645474 AACATGGAAACCAATTTTCGCG 39.14 23 -63.6 0.746 AH012741-RA RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain NA
48 ahy-mir390-3p CM025931.1 5912351 5912552 TGGCTCAATTTCTTGAGTTTTT 30.44 23 -48.5 0.731 AH003133-RA cytochrome P450, family 76, subfamily C, polypeptide 4 NA
49 ahy-mir-8908e-5p CM025931.1 14659500 14659285 ACCTTTTTCAGAAAGGCGATTT 34.79 23 -35.2 0.728 AH021115-RA Transducin/WD40 repeat-like superfamily protein NA
50 ahy-mir5265 CM025931.1 10883440 10883618 CACAGATGTTGGAATCCCAGAT 43.48 23 -40 0.724 AH023259-RA TRS120 NA

MFE: Minimum free energy; MFEI: Minimum free energy index;


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