PotTransDB

About PotTransDB

Potato (Solanum tuberosum L.) ranks third among the world's most significant food crops, following rice and wheat, in terms of human consumption. It boasts high yields of dry matter and calories per unit area and time, making it a valuable source of energy, proteins, vitamins, and minerals. Over a billion people worldwide enjoy potatoes both in their fresh form and as processed products like chips and French fries. Potatoes are a crop that requires intensive fertilization, with nitrogen (N) being a vital nutrient for optimal plant growth, tuber yield, and quality. Unfortunately, the excessive application of nitrogen in potato farming is a prevalent practice aimed at achieving high tuber yields. Here, the transcriptome data of potato under nitrogen stress were studied.

Summary

Items	Shoot	Root	Stolon
No. of DEGs : 1233	249	209	775
No. DElncRNAs : 269	57	53	159
No. eTM-DElncRNAs : 31	04	08	19
No. of IRES-lncRNAs:08	01	02	05
No. of circRNAs: 47	24	06	17
No. of circRNA-miRNAs :42	22	05	15
No. of IRES-circRNAs: 02	0	01	01
No. of Aternative Splicing events:	17200	16599	16174