BPCNVDb: Black Pepper CNV Database

A total of 1,89,629 CNV events were detected in 39 genotypes of black pepper out of which 1,59,390 were unique with 82,027 deletion and 77,363 duplications events. The size of the CNVs identified varied from 1.2 kb to 48452.6 kb, with an average size of 101 kb. The average size of the duplication and deletion is 145 kb and 59 kb respectively. Circos plot for CNV showing the chromosome-wide frequency distribution of the deletion and duplication events. Chromosome 1 (Pn1) possess the highest number of deletion events, and the highest number of duplications was found on chromosome 3 (Pn3).

A total of 11,360 CNVRs found with 5565 deletions and 5795 duplications.The deletions sized from 2.4 kb to 653.4 kb and duplications from 3.3 kb to 2323.2 kb. Radar plot for CNVR showing the chromosome-wide frequency distribution of the deletion and duplication events.