Retrive data

DElncRNA INFORMATION

lncRNA sequence
lncRNA id Length MFE CPC index Repetitive elements SSR on lncRNA sponge miRNA Target of lncRNA
Cb_lnc_0001 6013 -23.23 -1.16 NA Mono Gor-miR_leaf-3111 EG990562.1
Cb_lnc_0002 4590 -22.83 -0.79 NA NA Gor-miR_root-3003 EG976249.1
Cb_lnc_0003 3959 -23.3 -1.32 NA Mono NA EG991036.1
Cb_lnc_0004 3668 -21.74 -1.24 NA NA Gor-miR_leaf-3133 EG989380.1
Cb_lnc_0005 3635 -26.13 -0.9 NA Mono NA EG985654.1
Cb_lnc_0006 3509 -21.69 -0.99 NA NA Gor-miR_seed-3092 EG987826.1
Cb_lnc_0007 3495 -24.04 -1.02 NA Mono Gor-miR_bud-3155 EG991154.1
Cb_lnc_0008 3495 -23.27 -1.13 LINE/L1 NA NA EG989077.1
Cb_lnc_0009 3360 -21.63 -1.21 NA Mono Gor-miR_stem-3080 EG990908.1
Cb_lnc_0010 3303 -22.02 -1.26 NA NA NA EG987137.1
Cb_lnc_0011 3245 -24.27 -1.24 NA c Gor-miR_root-3052 EG986671.1
Cb_lnc_0012 3241 -25.64 -0.86 LTR/Gypsy NA Gor-miR_leaf-3034 EG990562.1
Cb_lnc_0013 3151 -24.86 -1 NA NA Gor-miR_bud-3088 EG990881.1
Cb_lnc_0014 3027 -22.19 -1.15 NA NA Gor-miR_bud-3022 EG989312.1
Cb_lnc_0015 3025 -20.92 -1.19 NA Tetra NA EG991098.1
Cb_lnc_0016 2949 -25.07 -1.19 LTR/Copia Mono NA EG991169.1
Cb_lnc_0017 2926 -25.42 -1.21 LTR/Gypsy Mono Gor-miR_seed-3124 EG988945.1
Cb_lnc_0018 2923 -22.96 -1.36 DNA/CMC-EnSpm NA NA EG983991.1
Cb_lnc_0019 2917 -22.97 -1.27 NA Mono Gor-miR_root-3147 EG990221.1
Cb_lnc_0020 2887 -18.59 -1.14 NA Mono Gor-miR_bud-3143 EG990061.1
Cb_lnc_0021 2882 -21.12 -1.25 NA NA NA EG990916.1
Cb_lnc_0022 2878 -26.23 -1.32 NA Mono Gor-miR_leaf-3014 EG976216.1
Cb_lnc_0023 2861 -22.71 -1.16 NA c Gor-miR_bud-3022 EG984263.1
Cb_lnc_0024 2836 -23.61 -1.26 NA NA Gor-miR_stem-3080 EG990728.1
Cb_lnc_0025 2831 -23.75 -0.12 NA Mono Gor-miR_bud-3085 EG988722.1
Cb_lnc_0026 2806 -20.79 -1.08 NA Tetra Gor-miR_leaf-3103 EG989533.1
Cb_lnc_0027 2761 -21.46 -1.2 NA NA NA EG990633.1
Cb_lnc_0028 2739 -23.16 -0.28 NA NA Gor-miR_bud-3112 EG991028.1
Cb_lnc_0029 2737 -21.34 -1.1 NA NA NA EG990216.1
Cb_lnc_0030 2731 -22.39 -1.16 NA Mono NA EG987500.1
Cb_lnc_0031 2694 -22.93 -0.96 NA Mono Gor-miR_stem-3131 EG987999.1
Cb_lnc_0032 2684 -22.96 -0.21 NA NA NA EG988940.1
Cb_lnc_0033 2680 -21.48 -1 NA Mono Gor-miR_stem-3131 EG991047.1
Cb_lnc_0034 2652 -23.48 -1 NA NA Gor-miR_leaf-3161 NA
Cb_lnc_0035 2642 -24.78 -1.23 NA Mono Gor-miR_bud-3022 EG990996.1
Cb_lnc_0036 2620 -19.77 -1.21 NA NA Gor-miR_bud-3085 EG985156.1
Cb_lnc_0037 2615 -20.28 -1.03 NA NA Gor-miR_bud-3155 EG980851.1
Cb_lnc_0038 2604 -23.8 -1.21 NA NA Gor-miR_leaf-3048 EG989513.1
Cb_lnc_0039 2592 -26.63 0.18 LTR/Copia NA Gor-miR_leaf-3043 EG990158.1
Cb_lnc_0040 2580 -21.52 -1.33 tRNA Di Gor-miR_stem-3046 EG990770.1
Cb_lnc_0041 2538 -23.57 -1.06 NA Mono Gor-miR_stem-3080 EG990996.1
Cb_lnc_0042 2535 -21.97 -1.12 NA Tri Gor-miR_leaf-3149 EG987053.1
Cb_lnc_0043 2535 -21.83 -1.12 NA Tri Gor-miR_leaf-3149 EG987053.1
Cb_lnc_0044 2521 -24.58 -1.28 NA NA NA EG990908.1
Cb_lnc_0045 2519 -26.79 -1.28 NA NA Gor-miR_leaf-3000 EG983991.1
Cb_lnc_0046 2454 -22.29 -1.09 NA Mono Gor-miR_stem-3010 EG986220.1
Cb_lnc_0047 2449 -26.62 -1.06 LTR/Gypsy NA Gor-miR_bud-3022 EG991152.1
Cb_lnc_0048 2434 -20.58 -1.19 NA NA Gor-miR_bud-3143 EG979891.1
Cb_lnc_0049 2409 -20.71 -1.03 NA Mono NA EG987826.1
Cb_lnc_0050 2403 -25.41 -1.1 NA NA NA EG991192.1
Cb_lnc_0051 2397 -22.07 -1.3 NA NA Gor-miR_leaf-3048 EG985596.1
Cb_lnc_0052 2390 -21.37 -1.1 NA Di Gor-miR_leaf-3165 NA
Cb_lnc_0053 2366 -21.58 -1.16 NA NA NA EG990603.1
Cb_lnc_0054 2364 -22.22 -1.08 NA NA Gor-miR_seed-3051 EG990548.1
Cb_lnc_0055 2362 -20.63 -1.12 NA Mono NA EG987294.1
Cb_lnc_0056 2360 -23.09 -1.21 NA Mono NA EG990501.1
Cb_lnc_0057 2335 -25.48 -1.28 LTR/Gypsy NA Gor-miR_root-3003 EG990728.1
Cb_lnc_0058 2335 -24.92 -0.9 NA NA NA EG990288.1
Cb_lnc_0059 2309 -18.58 -1.24 NA NA Gor-miR_root-3100 EG988996.1
Cb_lnc_0060 2306 -18.48 -1.19 NA Mono NA EG978396.1

MFE: Minimum free energy



ICAR-Indian Agricultural Statistics Research Institute Library Avenue, PUSA, New Delhi - 110 012
https://iasri.icar.gov.in/